RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 SLC25A34Q6PIV7 304 aa4.02□□□□□ -1.77
PTPRE-209ENST00000487428 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
PTPRE-209ENST00000487428 TRAV13-2A0A0B4J235 113 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 GAGE10A6NGK3 116 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 MT1HL1P0DM35 61 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 KRTAP10-8P60410 259 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 FAM229BQ4G0N7 80 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 S100A7L2Q5SY68 101 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 MUSTN1Q8IVN3 82 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
PTPRE-209ENST00000487428 TNXBP22105 4242 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 TRAV23DV6A0A075B6W5 121 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 B5MCH6 92 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 TSTD3H0UI37 97 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 NCR3O14931 201 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 ZNF73O43830 326 aaPredicted RBP4□□□□□ -1.77
PTPRE-209ENST00000487428 RPL13AP40429 203 aaKnown RBP4□□□□□ -1.77
PTPRE-209ENST00000487428 UBE2AP49459 152 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 Q6ZRX8 168 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 SVIPQ8NHG7 77 aa4□□□□□ -1.77
PTPRE-209ENST00000487428 A4D1N5 150 aa3.99□□□□□ -1.77
PTPRE-209ENST00000487428 FAM19A1Q7Z5A9 133 aa3.99□□□□□ -1.77
PTPRE-209ENST00000487428 C14orf144Q96I85 54 aa3.99□□□□□ -1.77
PTPRE-209ENST00000487428 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 ETDCA0A1B0GVM5 59 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 HINT1P49773 126 aaPredicted RBP3.98□□□□□ -1.77
PTPRE-209ENST00000487428 ELOF1P60002 83 aaKnown RBP3.98□□□□□ -1.77
PTPRE-209ENST00000487428 NPC2P61916 151 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 LINC00483Q53H64 154 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 HIST1H4GQ99525 98 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 UQCR10Q9UDW1 63 aa3.98□□□□□ -1.77
PTPRE-209ENST00000487428 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
PTPRE-209ENST00000487428 A0A1B0GWB2 263 aa3.97□□□□□ -1.77
PTPRE-209ENST00000487428 PRLHP81277 87 aa3.97□□□□□ -1.77
PTPRE-209ENST00000487428 SMCR5Q8TEV8 140 aa3.97□□□□□ -1.77
PTPRE-209ENST00000487428 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
PTPRE-209ENST00000487428 TMEM238LA0A1B0GVL6 79 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 A6NJY4 79 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 J3QL48 77 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 SPRR1BP22528 89 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 PCP4P48539 62 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 HSD52Q0P140 79 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 CEND1Q8N111 149 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 SPRR4Q96PI1 79 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 Q9BRP9 147 aa3.96□□□□□ -1.78
PTPRE-209ENST00000487428 CRYGAP11844 174 aa3.95□□□□□ -1.78
PTPRE-209ENST00000487428 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
PTPRE-209ENST00000487428 OR13C6PQ8NH95 151 aa3.95□□□□□ -1.78
PTPRE-209ENST00000487428 A6NDN8 102 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 CFC1BP0CG36 223 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 CFC1P0CG37 223 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 COX7BP24311 80 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 BVES-AS1Q5T3Y7 98 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 SMIM11BQ8TCY0 68 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 HIGD2AQ9BW72 106 aa3.94□□□□□ -1.78
PTPRE-209ENST00000487428 NHP2Q9NX24 153 aaKnown RBP3.94□□□□□ -1.78
PTPRE-209ENST00000487428 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
PTPRE-209ENST00000487428 A0A087X002 238 aa3.93□□□□□ -1.78
PTPRE-209ENST00000487428 VAMP3Q15836 100 aa3.93□□□□□ -1.78
PTPRE-209ENST00000487428 A0A1B0GV90 55 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 A0A1B0GX51 115 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 H0YGX0 51 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 ERC2-IT1O76042 136 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 SSBP3-AS1Q7Z2R9 100 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 PRR26Q8N8Z3 221 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 PRO1854Q9UHT4 67 aa3.92□□□□□ -1.78
PTPRE-209ENST00000487428 FXYD2P54710 66 aa3.91□□□□□ -1.78
PTPRE-209ENST00000487428 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
PTPRE-209ENST00000487428 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
PTPRE-209ENST00000487428 SPAG11AQ6PDA7 123 aa3.91□□□□□ -1.78
PTPRE-209ENST00000487428 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
PTPRE-209ENST00000487428 RAB37Q96AX2 223 aa3.91□□□□□ -1.78
PTPRE-209ENST00000487428 M0R143 59 aa3.9□□□□□ -1.79
PTPRE-209ENST00000487428 SLC25A20O43772 301 aa3.9□□□□□ -1.79
PTPRE-209ENST00000487428 TYMSOSQ8TAI1 123 aa3.9□□□□□ -1.79
PTPRE-209ENST00000487428 HERC1Q15751 4861 aa3.9□□□□□ -1.79
PTPRE-209ENST00000487428 TEX49A0A1B0GTD5 131 aa3.89□□□□□ -1.79
PTPRE-209ENST00000487428 GHRHP01286 108 aa3.89□□□□□ -1.79
PTPRE-209ENST00000487428 LINC01547P58512 204 aaPredicted RBP3.89□□□□□ -1.79
PTPRE-209ENST00000487428 OCIAD2Q56VL3 154 aa3.89□□□□□ -1.79
PTPRE-209ENST00000487428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.89□□□□□ -1.79
PTPRE-209ENST00000487428 hADV29S1A0JD25 119 aa3.88□□□□□ -1.79
PTPRE-209ENST00000487428 H3BQ85 93 aa3.88□□□□□ -1.79
PTPRE-209ENST00000487428 SNCGO76070 127 aa3.88□□□□□ -1.79
PTPRE-209ENST00000487428 C21orf62-AS1Q17RA5 79 aa3.88□□□□□ -1.79
PTPRE-209ENST00000487428 GAGE2AQ6NT46 116 aa3.88□□□□□ -1.79
PTPRE-209ENST00000487428 IGLV8-61A0A075B6I0 122 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 SPINK1P00995 79 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 CD164Q04900 197 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 Q8NBF4 154 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
PTPRE-209ENST00000487428 COX6CP09669 75 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 Q5XG85 94 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 SMIM29Q86T20 159 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 Q8N377 158 aa3.86□□□□□ -1.79
PTPRE-209ENST00000487428 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms