RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
SREBF1-215ENST00000487401 TMEM223A0PJW6 202 aa7.27□□□□□ -1.25
SREBF1-215ENST00000487401 Q8NDZ9 215 aa7.27□□□□□ -1.25
SREBF1-215ENST00000487401 SMIM13P0DJ93 91 aa7.26□□□□□ -1.25
SREBF1-215ENST00000487401 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
SREBF1-215ENST00000487401 HIGD2AQ9BW72 106 aa7.26□□□□□ -1.25
SREBF1-215ENST00000487401 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
SREBF1-215ENST00000487401 MUC2Q02817 5179 aa7.26□□□□□ -1.25
SREBF1-215ENST00000487401 E9PLD3 99 aa7.25□□□□□ -1.25
SREBF1-215ENST00000487401 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
SREBF1-215ENST00000487401 GTF2H5Q6ZYL4 71 aa7.25□□□□□ -1.25
SREBF1-215ENST00000487401 CEND1Q8N111 149 aa7.25□□□□□ -1.25
SREBF1-215ENST00000487401 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
SREBF1-215ENST00000487401 H3BUT2 72 aa7.24□□□□□ -1.25
SREBF1-215ENST00000487401 FXYD2P54710 66 aa7.24□□□□□ -1.25
SREBF1-215ENST00000487401 K7EP34 96 aa7.23□□□□□ -1.25
SREBF1-215ENST00000487401 HERV-K104P63124 156 aa7.23□□□□□ -1.25
SREBF1-215ENST00000487401 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
SREBF1-215ENST00000487401 CBY1Q9Y3M2 126 aa7.23□□□□□ -1.25
SREBF1-215ENST00000487401 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
SREBF1-215ENST00000487401 A0A1W2PPM0 123 aa7.22□□□□□ -1.25
SREBF1-215ENST00000487401 HERVK_113P61574 105 aa7.22□□□□□ -1.25
SREBF1-215ENST00000487401 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
SREBF1-215ENST00000487401 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
SREBF1-215ENST00000487401 ZNF706Q9Y5V0 76 aaPredicted RBP7.22□□□□□ -1.25
SREBF1-215ENST00000487401 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.26
SREBF1-215ENST00000487401 RAB37Q96AX2 223 aa7.21□□□□□ -1.26
SREBF1-215ENST00000487401 IGLV7-46A0A075B6I9 117 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 PRYO14603 147 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 NCR3O14931 201 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 FABP2P12104 132 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 SPRR4Q96PI1 79 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
SREBF1-215ENST00000487401 ETDCA0A1B0GVM5 59 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 A0A1B0GWB2 263 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 SPAG11AQ6PDA7 123 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 NHP2Q9NX24 153 aaKnown RBP7.19□□□□□ -1.26
SREBF1-215ENST00000487401 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
SREBF1-215ENST00000487401 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
SREBF1-215ENST00000487401 OCIAD2Q56VL3 154 aa7.18□□□□□ -1.26
SREBF1-215ENST00000487401 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
SREBF1-215ENST00000487401 NAA38Q9BRA0 125 aaKnown RBP7.18□□□□□ -1.26
SREBF1-215ENST00000487401 KCNQ1DNQ9H478 68 aa7.18□□□□□ -1.26
SREBF1-215ENST00000487401 K7ERJ3 54 aa7.17□□□□□ -1.26
SREBF1-215ENST00000487401 LEPROTO15243 131 aa7.17□□□□□ -1.26
SREBF1-215ENST00000487401 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
SREBF1-215ENST00000487401 TRBV10-3A0A0K0K1G6 114 aa7.16□□□□□ -1.26
SREBF1-215ENST00000487401 SPRR1AP35321 89 aa7.16□□□□□ -1.26
SREBF1-215ENST00000487401 PPDPFQ9H3Y8 114 aa7.16□□□□□ -1.26
SREBF1-215ENST00000487401 SPANXB1Q9NS25 103 aaPredicted RBP7.16□□□□□ -1.26
SREBF1-215ENST00000487401 MUC17Q685J3 4493 aa7.15□□□□□ -1.26
SREBF1-215ENST00000487401 TMEM238LA0A1B0GVL6 79 aa7.15□□□□□ -1.26
SREBF1-215ENST00000487401 A6NJY4 79 aa7.15□□□□□ -1.26
SREBF1-215ENST00000487401 TPRXLQ17RH7 258 aa7.15□□□□□ -1.26
SREBF1-215ENST00000487401 J3QQQ9 107 aa7.14□□□□□ -1.27
SREBF1-215ENST00000487401 K7ERU9 68 aa7.14□□□□□ -1.27
SREBF1-215ENST00000487401 TSPEAR-AS2P59090 65 aa7.14□□□□□ -1.27
SREBF1-215ENST00000487401 SCGB1D4Q6XE38 83 aa7.14□□□□□ -1.27
SREBF1-215ENST00000487401 DAND5Q8N907 189 aa7.14□□□□□ -1.27
SREBF1-215ENST00000487401 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
SREBF1-215ENST00000487401 LGALS3P17931 250 aaKnown RBP7.13□□□□□ -1.27
SREBF1-215ENST00000487401 Q8NBF4 154 aa7.13□□□□□ -1.27
SREBF1-215ENST00000487401 LOC107984156A0A0G2JMH3 177 aa7.12□□□□□ -1.27
SREBF1-215ENST00000487401 TRBV10-2A0A0K0K1G8 114 aa7.12□□□□□ -1.27
SREBF1-215ENST00000487401 GAGE2AQ6NT46 116 aa7.12□□□□□ -1.27
SREBF1-215ENST00000487401 ARL17AQ8IVW1 177 aa7.12□□□□□ -1.27
SREBF1-215ENST00000487401 B5MCH6 92 aa7.11□□□□□ -1.27
SREBF1-215ENST00000487401 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
SREBF1-215ENST00000487401 F8W1H4 67 aa7.1□□□□□ -1.27
SREBF1-215ENST00000487401 SPINK1P00995 79 aa7.1□□□□□ -1.27
SREBF1-215ENST00000487401 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
SREBF1-215ENST00000487401 S100A7L2Q5SY68 101 aa7.1□□□□□ -1.27
SREBF1-215ENST00000487401 FAT4Q6V0I7 4981 aa7.08□□□□□ -1.28
SREBF1-215ENST00000487401 IGLV9-49A0A0B4J1Y8 123 aa7.08□□□□□ -1.28
SREBF1-215ENST00000487401 ERC2-IT1O76042 136 aa7.08□□□□□ -1.28
SREBF1-215ENST00000487401 NDUFC2O95298 119 aa7.08□□□□□ -1.28
SREBF1-215ENST00000487401 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
SREBF1-215ENST00000487401 IGLV6-57P01721 117 aa7.07□□□□□ -1.28
SREBF1-215ENST00000487401 MOBPQ13875 183 aa7.07□□□□□ -1.28
SREBF1-215ENST00000487401 SSBP3-AS1Q7Z2R9 100 aa7.07□□□□□ -1.28
SREBF1-215ENST00000487401 TRAV23DV6A0A075B6W5 121 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 CFC1P0CG37 223 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 LYRM7Q5U5X0 104 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 Q6ZRX8 168 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 Q9BRP9 147 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
SREBF1-215ENST00000487401 A0A0J9YXY3 114 aa7.05□□□□□ -1.28
SREBF1-215ENST00000487401 NPC2P61916 151 aa7.05□□□□□ -1.28
SREBF1-215ENST00000487401 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
SREBF1-215ENST00000487401 A0A0B4J2C4 111 aa7.04□□□□□ -1.28
SREBF1-215ENST00000487401 H3BMG7 143 aa7.04□□□□□ -1.28
SREBF1-215ENST00000487401 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
SREBF1-215ENST00000487401 PCP4P48539 62 aa7.04□□□□□ -1.28
SREBF1-215ENST00000487401 ADAMTSL4-AS1Q5T5F5 129 aa7.04□□□□□ -1.28
SREBF1-215ENST00000487401 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
SREBF1-215ENST00000487401 TRBV20-1A0A075B6N2 111 aa7.03□□□□□ -1.28
SREBF1-215ENST00000487401 A4D1N5 150 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms