RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 ARL17AQ8IVW1 177 aa13.78□□□□□ -0.2
RHBDF1-210ENST00000487201 RPL37AP8A6NKH3 93 aa13.77□□□□□ -0.21
RHBDF1-210ENST00000487201 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
RHBDF1-210ENST00000487201 EIF4EBP3O60516 100 aaPredicted RBP13.76□□□□□ -0.21
RHBDF1-210ENST00000487201 SRSF9Q13242 221 aaKnown RBP eCLIP13.76□□□□□ -0.21
RHBDF1-210ENST00000487201 SPANXB1Q9NS25 103 aaPredicted RBP13.75□□□□□ -0.21
RHBDF1-210ENST00000487201 SCGB1A1P11684 91 aa13.74□□□□□ -0.21
RHBDF1-210ENST00000487201 SOSTDC1Q6X4U4 206 aa13.74□□□□□ -0.21
RHBDF1-210ENST00000487201 FAT3Q8TDW7 4589 aa13.74□□□□□ -0.21
RHBDF1-210ENST00000487201 TIMM17BO60830 172 aa13.73□□□□□ -0.21
RHBDF1-210ENST00000487201 SCGB1D4Q6XE38 83 aa13.73□□□□□ -0.21
RHBDF1-210ENST00000487201 IGLV7-43P04211 117 aa13.72□□□□□ -0.21
RHBDF1-210ENST00000487201 IGLV1-50A0A075B6I6 118 aa13.71□□□□□ -0.21
RHBDF1-210ENST00000487201 IGKV2-28A0A075B6P5 120 aa13.71□□□□□ -0.21
RHBDF1-210ENST00000487201 IGKV2D-28P01615 120 aa13.71□□□□□ -0.21
RHBDF1-210ENST00000487201 NPC2P61916 151 aa13.7□□□□□ -0.22
RHBDF1-210ENST00000487201 SPINK6Q6UWN8 80 aa13.69□□□□□ -0.22
RHBDF1-210ENST00000487201 NCR3O14931 201 aa13.68□□□□□ -0.22
RHBDF1-210ENST00000487201 DMBT1Q9UGM3 2413 aaPredicted RBP13.68□□□□□ -0.22
RHBDF1-210ENST00000487201 M0R378 163 aa13.67□□□□□ -0.22
RHBDF1-210ENST00000487201 LINC00308Q8TCZ7 52 aa13.67□□□□□ -0.22
RHBDF1-210ENST00000487201 PRO0461Q9UI25 63 aa13.67□□□□□ -0.22
RHBDF1-210ENST00000487201 TRBV20-1A0A075B6N2 111 aa13.66□□□□□ -0.22
RHBDF1-210ENST00000487201 H3BMG7 143 aa13.66□□□□□ -0.22
RHBDF1-210ENST00000487201 TMEM238C9JI98 176 aa13.64□□□□□ -0.23
RHBDF1-210ENST00000487201 BCE1O60756 84 aa13.64□□□□□ -0.23
RHBDF1-210ENST00000487201 SIGMAR1Q99720 223 aa13.64□□□□□ -0.23
RHBDF1-210ENST00000487201 NDUFC2O95298 119 aa13.64□□□□□ -0.23
RHBDF1-210ENST00000487201 KRTAP29-1A8MX34 341 aaPredicted RBP13.63□□□□□ -0.23
RHBDF1-210ENST00000487201 SPANXDQ9BXN6 97 aa13.63□□□□□ -0.23
RHBDF1-210ENST00000487201 SPANXCQ9NY87 97 aa13.63□□□□□ -0.23
RHBDF1-210ENST00000487201 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
RHBDF1-210ENST00000487201 TRBV10-3A0A0K0K1G6 114 aa13.61□□□□□ -0.23
RHBDF1-210ENST00000487201 TRBV10-2A0A0K0K1G8 114 aa13.61□□□□□ -0.23
RHBDF1-210ENST00000487201 ZNF861PO60384 105 aa13.61□□□□□ -0.23
RHBDF1-210ENST00000487201 TSPAN13O95857 204 aa13.61□□□□□ -0.23
RHBDF1-210ENST00000487201 REG3GQ6UW15 175 aa13.6□□□□□ -0.23
RHBDF1-210ENST00000487201 KRTAP13-1Q8IUC0 172 aa13.6□□□□□ -0.23
RHBDF1-210ENST00000487201 ETDBQ3ZM63 59 aa13.59□□□□□ -0.23
RHBDF1-210ENST00000487201 OXTP01178 125 aa13.59□□□□□ -0.23
RHBDF1-210ENST00000487201 KCNQ1DNQ9H478 68 aa13.58□□□□□ -0.24
RHBDF1-210ENST00000487201 H0Y9J4 135 aa13.57□□□□□ -0.24
RHBDF1-210ENST00000487201 DIRC1Q969H9 104 aa13.57□□□□□ -0.24
RHBDF1-210ENST00000487201 TNXBP22105 4242 aa13.57□□□□□ -0.24
RHBDF1-210ENST00000487201 PRO1854Q9UHT4 67 aa13.56□□□□□ -0.24
RHBDF1-210ENST00000487201 A0A0B4J2C4 111 aa13.56□□□□□ -0.24
RHBDF1-210ENST00000487201 IGLV6-57P01721 117 aa13.56□□□□□ -0.24
RHBDF1-210ENST00000487201 HERC1Q15751 4861 aa13.55□□□□□ -0.24
RHBDF1-210ENST00000487201 PRYO14603 147 aa13.54□□□□□ -0.24
RHBDF1-210ENST00000487201 SPRR1AP35321 89 aa13.54□□□□□ -0.24
RHBDF1-210ENST00000487201 PPDPFQ9H3Y8 114 aa13.54□□□□□ -0.24
RHBDF1-210ENST00000487201 CFC1BP0CG36 223 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 CFC1P0CG37 223 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 IFITM1P13164 125 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 RPL28P46779 137 aaKnown RBP13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 PRLHP81277 87 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 KRTAP4-16G5E9R7 235 aaPredicted RBP13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 MT1HL1P0DM35 61 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 PSMB2P49721 201 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 MUSTN1Q8IVN3 82 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 LINC01600Q96MT4 127 aa13.53□□□□□ -0.24
RHBDF1-210ENST00000487201 UBE2AP49459 152 aa13.52□□□□□ -0.25
RHBDF1-210ENST00000487201 FAM19A1Q7Z5A9 133 aa13.52□□□□□ -0.25
RHBDF1-210ENST00000487201 PPDPFLQ8WWR9 84 aa13.52□□□□□ -0.25
RHBDF1-210ENST00000487201 TEN1Q86WV5 123 aa13.51□□□□□ -0.25
RHBDF1-210ENST00000487201 KRTAP1-4P0C5Y4 121 aa13.5□□□□□ -0.25
RHBDF1-210ENST00000487201 S100A7L2Q5SY68 101 aa13.5□□□□□ -0.25
RHBDF1-210ENST00000487201 J3QL48 77 aa13.5□□□□□ -0.25
RHBDF1-210ENST00000487201 LINC00337Q8N6G1 96 aa13.5□□□□□ -0.25
RHBDF1-210ENST00000487201 SMCPP49901 116 aaPredicted RBP13.48□□□□□ -0.25
RHBDF1-210ENST00000487201 COPS9Q8WXC6 57 aa13.48□□□□□ -0.25
RHBDF1-210ENST00000487201 A4D1N5 150 aa13.46□□□□□ -0.25
RHBDF1-210ENST00000487201 TCL1BO95988 128 aa13.46□□□□□ -0.25
RHBDF1-210ENST00000487201 SCGB1C2P0DMR2 95 aa13.46□□□□□ -0.25
RHBDF1-210ENST00000487201 TRAV23DV6A0A075B6W5 121 aa13.44□□□□□ -0.26
RHBDF1-210ENST00000487201 A0A1B0GV72 72 aa13.44□□□□□ -0.26
RHBDF1-210ENST00000487201 MTURNQ8N3F0 131 aa13.44□□□□□ -0.26
RHBDF1-210ENST00000487201 OR13C6PQ8NH95 151 aa13.43□□□□□ -0.26
RHBDF1-210ENST00000487201 KRTAP10-8P60410 259 aa13.42□□□□□ -0.26
RHBDF1-210ENST00000487201 ETDCA0A1B0GVM5 59 aa13.42□□□□□ -0.26
RHBDF1-210ENST00000487201 B5MCH6 92 aa13.42□□□□□ -0.26
RHBDF1-210ENST00000487201 ATXN8Q156A1 80 aa13.42□□□□□ -0.26
RHBDF1-210ENST00000487201 ZNF73O43830 326 aaPredicted RBP13.41□□□□□ -0.26
RHBDF1-210ENST00000487201 HIGD2AQ9BW72 106 aa13.4□□□□□ -0.26
RHBDF1-210ENST00000487201 SLC25A20O43772 301 aa13.39□□□□□ -0.27
RHBDF1-210ENST00000487201 PRR26Q8N8Z3 221 aa13.39□□□□□ -0.27
RHBDF1-210ENST00000487201 SMCR5Q8TEV8 140 aa13.39□□□□□ -0.27
RHBDF1-210ENST00000487201 Q6ZRX8 168 aa13.38□□□□□ -0.27
RHBDF1-210ENST00000487201 CDIP1Q9H305 208 aa13.38□□□□□ -0.27
RHBDF1-210ENST00000487201 Q9BRP9 147 aa13.37□□□□□ -0.27
RHBDF1-210ENST00000487201 COX6CP09669 75 aa13.36□□□□□ -0.27
RHBDF1-210ENST00000487201 ANAPC11Q9NYG5 84 aa13.36□□□□□ -0.27
RHBDF1-210ENST00000487201 Q1RN00 199 aa13.35□□□□□ -0.27
RHBDF1-210ENST00000487201 ANKRD29Q8N6D5 301 aa13.35□□□□□ -0.27
RHBDF1-210ENST00000487201 A0A087X002 238 aa13.33□□□□□ -0.27
RHBDF1-210ENST00000487201 C9JAW5 83 aa13.33□□□□□ -0.28
RHBDF1-210ENST00000487201 ERC2-IT1O76042 136 aa13.33□□□□□ -0.28
RHBDF1-210ENST00000487201 TRAV13-2A0A0B4J235 113 aa13.32□□□□□ -0.28
RHBDF1-210ENST00000487201 RPL13AP40429 203 aaKnown RBP13.32□□□□□ -0.28
RHBDF1-210ENST00000487201 C6orf99Q4VX62 202 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms