RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 EGFEM1PQ0D2K5 195 aa6.95□□□□□ -1.3
CCDC171-208ENST00000486641 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
CCDC171-208ENST00000486641 HTN3P15516 51 aa6.95□□□□□ -1.3
CCDC171-208ENST00000486641 PSCAO43653 123 aa6.94□□□□□ -1.3
CCDC171-208ENST00000486641 DEFB135Q30KP9 77 aa6.94□□□□□ -1.3
CCDC171-208ENST00000486641 OXLD1Q5BKU9 147 aa6.94□□□□□ -1.3
CCDC171-208ENST00000486641 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
CCDC171-208ENST00000486641 K7EQZ3 153 aa6.94□□□□□ -1.3
CCDC171-208ENST00000486641 PRB2P02812 416 aaPredicted RBP6.94□□□□□ -1.3
CCDC171-208ENST00000486641 A8MU10 97 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 A8MUN3 132 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 DEFB113Q30KQ7 82 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 USP24Q9UPU5 2620 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 A0A1B0GW54 56 aa6.93□□□□□ -1.3
CCDC171-208ENST00000486641 ANK3Q12955 4377 aaKnown RBP6.92□□□□□ -1.3
CCDC171-208ENST00000486641 C1orf137Q5JT78 98 aa6.92□□□□□ -1.3
CCDC171-208ENST00000486641 KCNQ1DNQ9H478 68 aa6.92□□□□□ -1.3
CCDC171-208ENST00000486641 SYCNQ0VAF6 134 aa6.91□□□□□ -1.3
CCDC171-208ENST00000486641 KRTAP26-1Q6PEX3 210 aa6.91□□□□□ -1.3
CCDC171-208ENST00000486641 C15orf56Q8N910 161 aa6.91□□□□□ -1.3
CCDC171-208ENST00000486641 TNP2Q05952 138 aa6.9□□□□□ -1.3
CCDC171-208ENST00000486641 Q8NBF4 154 aa6.9□□□□□ -1.3
CCDC171-208ENST00000486641 ABCA12Q86UK0 2595 aa6.9□□□□□ -1.3
CCDC171-208ENST00000486641 MYO18BQ8IUG5 2567 aa6.9□□□□□ -1.3
CCDC171-208ENST00000486641 KRTAP1-3Q8IUG1 177 aa6.9□□□□□ -1.31
CCDC171-208ENST00000486641 SERTAD4-AS1Q5TG53 156 aa6.89□□□□□ -1.31
CCDC171-208ENST00000486641 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
CCDC171-208ENST00000486641 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
CCDC171-208ENST00000486641 HCG22E2RYF7 251 aa6.89□□□□□ -1.31
CCDC171-208ENST00000486641 Q9BRP9 147 aa6.89□□□□□ -1.31
CCDC171-208ENST00000486641 Q5VV11 94 aa6.88□□□□□ -1.31
CCDC171-208ENST00000486641 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
CCDC171-208ENST00000486641 WFDC10BQ8IUB3 73 aa6.88□□□□□ -1.31
CCDC171-208ENST00000486641 FAM208BQ5VWN6 2430 aa6.88□□□□□ -1.31
CCDC171-208ENST00000486641 Q8NAQ8 132 aa6.87□□□□□ -1.31
CCDC171-208ENST00000486641 DHRS4-AS1Q9P1J3 65 aa6.87□□□□□ -1.31
CCDC171-208ENST00000486641 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
CCDC171-208ENST00000486641 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
CCDC171-208ENST00000486641 Q6ZRX8 168 aa6.87□□□□□ -1.31
CCDC171-208ENST00000486641 NDUFB1O75438 58 aa6.86□□□□□ -1.31
CCDC171-208ENST00000486641 SPART-AS1P0CW21 52 aa6.86□□□□□ -1.31
CCDC171-208ENST00000486641 ITPR3Q14573 2671 aa6.86□□□□□ -1.31
CCDC171-208ENST00000486641 CD164Q04900 197 aa6.85□□□□□ -1.31
CCDC171-208ENST00000486641 B9D2Q9BPU9 175 aa6.85□□□□□ -1.31
CCDC171-208ENST00000486641 KRTAP4-16G5E9R7 235 aaPredicted RBP6.85□□□□□ -1.31
CCDC171-208ENST00000486641 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
CCDC171-208ENST00000486641 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
CCDC171-208ENST00000486641 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
CCDC171-208ENST00000486641 A0A1W2PNN7 141 aa6.83□□□□□ -1.32
CCDC171-208ENST00000486641 MP68P56378 58 aa6.83□□□□□ -1.32
CCDC171-208ENST00000486641 Q8N9P0 234 aaPredicted RBP6.83□□□□□ -1.32
CCDC171-208ENST00000486641 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
CCDC171-208ENST00000486641 CCDC168Q8NDH2 2452 aa6.83□□□□□ -1.32
CCDC171-208ENST00000486641 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
CCDC171-208ENST00000486641 CHKB-CPT1BH3BT56 60 aa6.82□□□□□ -1.32
CCDC171-208ENST00000486641 APOC4P55056 127 aa6.82□□□□□ -1.32
CCDC171-208ENST00000486641 UBE2BP63146 152 aa6.82□□□□□ -1.32
CCDC171-208ENST00000486641 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
CCDC171-208ENST00000486641 HIVEP2P31629 2446 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 VWFP04275 2813 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 IGLV1-50A0A075B6I6 118 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 SPRR1AP35321 89 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 UBE2AP49459 152 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 LINC00588Q9Y4M8 146 aa6.81□□□□□ -1.32
CCDC171-208ENST00000486641 RETNQ9HD89 108 aa6.8□□□□□ -1.32
CCDC171-208ENST00000486641 FLNAP21333 2647 aaKnown RBP6.8□□□□□ -1.32
CCDC171-208ENST00000486641 IGKV2D-24A0A075B6R9 120 aa6.79□□□□□ -1.32
CCDC171-208ENST00000486641 LINC00476Q8WZB0 136 aa6.79□□□□□ -1.32
CCDC171-208ENST00000486641 ZNF462Q96JM2 2506 aa6.79□□□□□ -1.32
CCDC171-208ENST00000486641 LIMD2Q9BT23 127 aa6.79□□□□□ -1.32
CCDC171-208ENST00000486641 PRR15LQ9BU68 103 aa6.79□□□□□ -1.32
CCDC171-208ENST00000486641 RPL37AP61513 92 aaKnown RBP6.78□□□□□ -1.32
CCDC171-208ENST00000486641 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
CCDC171-208ENST00000486641 LCA10Q71F78 164 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 KRTAP7-1Q8IUC3 87 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 SPTSSBQ8NFR3 76 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 UBR5O95071 2799 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-208ENST00000486641 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
CCDC171-208ENST00000486641 H0Y9P7 68 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 KRTAP1-1Q07627 177 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 IGFL1Q6UW32 110 aa6.77□□□□□ -1.33
CCDC171-208ENST00000486641 MTORP42345 2549 aa6.76□□□□□ -1.33
CCDC171-208ENST00000486641 MRPL55Q7Z7F7 128 aaKnown RBP6.76□□□□□ -1.33
CCDC171-208ENST00000486641 KMT2BQ9UMN6 2715 aaPredicted RBP6.76□□□□□ -1.33
CCDC171-208ENST00000486641 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
CCDC171-208ENST00000486641 IGLV5-37A0A075B6J1 123 aa6.75□□□□□ -1.33
CCDC171-208ENST00000486641 A0A087WSZ3 146 aa6.75□□□□□ -1.33
CCDC171-208ENST00000486641 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
CCDC171-208ENST00000486641 HIVEP1P15822 2718 aa6.74□□□□□ -1.33
CCDC171-208ENST00000486641 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
CCDC171-208ENST00000486641 ACANP16112 2415 aa6.74□□□□□ -1.33
CCDC171-208ENST00000486641 ATP11AUNQ6ZP68 121 aa6.73□□□□□ -1.33
CCDC171-208ENST00000486641 Q75L30 129 aa6.73□□□□□ -1.33
CCDC171-208ENST00000486641 C9orf163Q8N9P6 203 aa6.73□□□□□ -1.33
CCDC171-208ENST00000486641 PKD1L1Q8TDX9 2849 aa6.73□□□□□ -1.33
CCDC171-208ENST00000486641 H3BPC8 53 aa6.72□□□□□ -1.33
CCDC171-208ENST00000486641 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms