RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 DAND5Q8N907 189 aa3.83□□□□□ -1.8
USP41-204ENST00000486536 CARD19Q96LW7 228 aa3.83□□□□□ -1.8
USP41-204ENST00000486536 NHP2Q9NX24 153 aaKnown RBP3.83□□□□□ -1.8
USP41-204ENST00000486536 PKIGQ9Y2B9 76 aa3.83□□□□□ -1.8
USP41-204ENST00000486536 CHTF8P0CG12 524 aa3.82□□□□□ -1.8
USP41-204ENST00000486536 C9orf116Q5BN46 136 aaPredicted RBP3.82□□□□□ -1.8
USP41-204ENST00000486536 SOSTDC1Q6X4U4 206 aa3.82□□□□□ -1.8
USP41-204ENST00000486536 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
USP41-204ENST00000486536 SND1-IT1Q9HBX3 110 aa3.82□□□□□ -1.8
USP41-204ENST00000486536 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
USP41-204ENST00000486536 PLECQ15149 4684 aaKnown RBP3.82□□□□□ -1.8
USP41-204ENST00000486536 A0A087WTM6 91 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 TRAV13-2A0A0B4J235 113 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 LOC107984640A0A0U1RRK4 108 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 TAX1BP3O14907 124 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 LECT2O14960 151 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 NPC2P61916 151 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 WFDC2Q14508 124 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 PRO1854Q9UHT4 67 aa3.81□□□□□ -1.8
USP41-204ENST00000486536 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
USP41-204ENST00000486536 K7ERJ3 54 aa3.8□□□□□ -1.8
USP41-204ENST00000486536 C9orf129Q5T035 196 aaKnown RBP3.8□□□□□ -1.8
USP41-204ENST00000486536 Q8N814 137 aa3.8□□□□□ -1.8
USP41-204ENST00000486536 TRBV10-2A0A0K0K1G8 114 aa3.79□□□□□ -1.8
USP41-204ENST00000486536 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
USP41-204ENST00000486536 C9orf163Q8N9P6 203 aa3.79□□□□□ -1.8
USP41-204ENST00000486536 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
USP41-204ENST00000486536 IGKV2-28A0A075B6P5 120 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 C16orf90A8MZG2 172 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 H3BUT2 72 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 IGKV2D-28P01615 120 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
USP41-204ENST00000486536 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 LINC00337Q8N6G1 96 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 TMEM126AQ9H061 195 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 CBY1Q9Y3M2 126 aa3.78□□□□□ -1.8
USP41-204ENST00000486536 A0A1W2PPM0 123 aa3.77□□□□□ -1.81
USP41-204ENST00000486536 M0R378 163 aa3.77□□□□□ -1.81
USP41-204ENST00000486536 COX6CP09669 75 aa3.77□□□□□ -1.81
USP41-204ENST00000486536 FABP2P12104 132 aa3.77□□□□□ -1.81
USP41-204ENST00000486536 LINC00474Q9P2X8 69 aa3.77□□□□□ -1.81
USP41-204ENST00000486536 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 A0A1B0GV90 55 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 RTL8CO15255 209 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 RPL28P46779 137 aaKnown RBP3.76□□□□□ -1.81
USP41-204ENST00000486536 S100A7L2Q5SY68 101 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 SDIM1Q6ZPB5 146 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 OR13C6PQ8NH95 151 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 VPS13DQ5THJ4 4388 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 ALMS1Q8TCU4 4167 aa3.76□□□□□ -1.81
USP41-204ENST00000486536 TRBV20-1A0A075B6N2 111 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 A0A096LNI7 61 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 H7C2G1 150 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 NCR3O14931 201 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 IGLV6-57P01721 117 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 PSMB2P49721 201 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 PRR3P79522 188 aaKnown RBP3.75□□□□□ -1.81
USP41-204ENST00000486536 VAMP3Q15836 100 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 LINC00336Q6ZUF6 198 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 GTF2H5Q6ZYL4 71 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 Q8NDZ9 215 aa3.75□□□□□ -1.81
USP41-204ENST00000486536 FRAS1Q86XX4 4008 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 H0YGX0 51 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 SCGB1C2P0DMR2 95 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 RYR1P21817 5038 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 NAA38Q9BRA0 125 aaKnown RBP3.74□□□□□ -1.81
USP41-204ENST00000486536 SPCS1Q9Y6A9 102 aa3.74□□□□□ -1.81
USP41-204ENST00000486536 IGKV2-24A0A0C4DH68 120 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 TRBV10-3A0A0K0K1G6 114 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 K7EP34 96 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 OXTP01178 125 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 DSCR10P59022 87 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 C22orf24Q9Y442 160 aa3.73□□□□□ -1.81
USP41-204ENST00000486536 TRAV23DV6A0A075B6W5 121 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 TRBV7-6A0A0J9YX20 115 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 A0A1B0GX51 115 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 ATXN8Q156A1 80 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 FAM19A5Q7Z5A7 132 aaPredicted RBP3.72□□□□□ -1.81
USP41-204ENST00000486536 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
USP41-204ENST00000486536 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 KCNQ1DNQ9H478 68 aa3.72□□□□□ -1.81
USP41-204ENST00000486536 IGLV1-50A0A075B6I6 118 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 A0A1W2PNN7 141 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 M0QXV9 152 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 LST1O00453 97 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 ZNF73O43830 326 aaPredicted RBP3.71□□□□□ -1.82
USP41-204ENST00000486536 SNCGO76070 127 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 TCL1BO95988 128 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 C6orf99Q4VX62 202 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 DIRC1Q969H9 104 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 LINC00167Q96N53 147 aa3.71□□□□□ -1.82
USP41-204ENST00000486536 DNAH10Q8IVF4 4471 aa3.7□□□□□ -1.82
USP41-204ENST00000486536 TRACP01848 142 aa3.7□□□□□ -1.82
USP41-204ENST00000486536 SPRR1AP35321 89 aa3.7□□□□□ -1.82
USP41-204ENST00000486536 DPH3Q96FX2 82 aa3.7□□□□□ -1.82
USP41-204ENST00000486536 PLAC8Q9NZF1 115 aa3.7□□□□□ -1.82
USP41-204ENST00000486536 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
USP41-204ENST00000486536 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms