RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 C14orf132Q9NPU4 83 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 HERC2O95714 4834 aa6.08□□□□□ -1.44
COL12A1-208ENST00000486533 PDE6GP18545 87 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 Q6ZR54 194 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 Q8N814 137 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 SMCR5Q8TEV8 140 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 LINC00526Q96FQ7 95 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 C22orf24Q9Y442 160 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
COL12A1-208ENST00000486533 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 COX7CP15954 63 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 RPL18AQ02543 176 aaKnown RBP6.06□□□□□ -1.44
COL12A1-208ENST00000486533 SPAG11BQ08648 103 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 C1orf134Q5TEV5 83 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 HIST1H4AP62805 103 aaKnown RBP6.06□□□□□ -1.44
COL12A1-208ENST00000486533 KIAA0087Q14695 138 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 CLPSL2Q6UWE3 100 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 UBL5Q9BZL1 73 aa6.06□□□□□ -1.44
COL12A1-208ENST00000486533 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
COL12A1-208ENST00000486533 TRBV10-3A0A0K0K1G6 114 aa6.05□□□□□ -1.44
COL12A1-208ENST00000486533 SVIPQ8NHG7 77 aa6.05□□□□□ -1.44
COL12A1-208ENST00000486533 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
COL12A1-208ENST00000486533 F8WDY8 70 aa6.04□□□□□ -1.44
COL12A1-208ENST00000486533 ZNF561-AS1K7EIQ3 104 aa6.04□□□□□ -1.44
COL12A1-208ENST00000486533 LINC00588Q9Y4M8 146 aa6.04□□□□□ -1.44
COL12A1-208ENST00000486533 A0A096LPF7 62 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 hADV29S1A0JD25 119 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 H3BNG1 76 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 NCR3O14931 201 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 DNAH17Q9UFH2 4485 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 PKD1P98161 4303 aa6.03□□□□□ -1.44
COL12A1-208ENST00000486533 CRYGAP11844 174 aa6.02□□□□□ -1.45
COL12A1-208ENST00000486533 LINC00575Q6W349 94 aa6.02□□□□□ -1.45
COL12A1-208ENST00000486533 LOC110117498A0A087WWA1 95 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 TRBV7-6A0A0J9YX20 115 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 BCE1O60756 84 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 RBM3P98179 157 aaKnown RBP6.01□□□□□ -1.45
COL12A1-208ENST00000486533 C6orf223Q8N319 242 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 PRR34Q9NV39 138 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 C6orf99Q4VX62 202 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 SMIM20Q8N5G0 67 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 DIRC1Q969H9 104 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 KRTAP17-1Q9BYP8 105 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 KRTAP4-11Q9BYQ6 195 aa6.01□□□□□ -1.45
COL12A1-208ENST00000486533 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
COL12A1-208ENST00000486533 IGLV6-57P01721 117 aa6□□□□□ -1.45
COL12A1-208ENST00000486533 SLPIP03973 132 aa6□□□□□ -1.45
COL12A1-208ENST00000486533 ESRGQ1W209 222 aa6□□□□□ -1.45
COL12A1-208ENST00000486533 DSCR8Q96T75 97 aa6□□□□□ -1.45
COL12A1-208ENST00000486533 IGKV3D-7A0A0C4DH55 119 aa5.99□□□□□ -1.45
COL12A1-208ENST00000486533 TMEM258P61165 79 aa5.99□□□□□ -1.45
COL12A1-208ENST00000486533 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.99□□□□□ -1.45
COL12A1-208ENST00000486533 LAMTOR3Q9UHA4 124 aa5.99□□□□□ -1.45
COL12A1-208ENST00000486533 DNAH11Q96DT5 4516 aa5.99□□□□□ -1.45
COL12A1-208ENST00000486533 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
COL12A1-208ENST00000486533 USP17L23D6RBM5 183 aa5.98□□□□□ -1.45
COL12A1-208ENST00000486533 LYPD5Q6UWN5 251 aa5.98□□□□□ -1.45
COL12A1-208ENST00000486533 UPK3BQ9BT76 320 aa5.98□□□□□ -1.45
COL12A1-208ENST00000486533 KRTAP1-5Q9BYS1 174 aa5.98□□□□□ -1.45
COL12A1-208ENST00000486533 C16orf90A8MZG2 172 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 J3KT08 172 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 COX7BP24311 80 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 C2orf48Q96LS8 159 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 KLK12Q9UKR0 248 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 NDUFC2-KCTD14E9PQ53 114 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 UNQ6190/PRO20217Q6UXQ8 127 aa5.97□□□□□ -1.45
COL12A1-208ENST00000486533 DYNC1H1Q14204 4646 aaKnown RBP5.96□□□□□ -1.46
COL12A1-208ENST00000486533 M0R378 163 aa5.96□□□□□ -1.46
COL12A1-208ENST00000486533 Q6ZQT0 140 aa5.96□□□□□ -1.46
COL12A1-208ENST00000486533 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
COL12A1-208ENST00000486533 RPS28P62857 69 aaKnown RBP5.95□□□□□ -1.46
COL12A1-208ENST00000486533 PRR3P79522 188 aaKnown RBP5.95□□□□□ -1.46
COL12A1-208ENST00000486533 C9orf116Q5BN46 136 aaPredicted RBP5.95□□□□□ -1.46
COL12A1-208ENST00000486533 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
COL12A1-208ENST00000486533 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
COL12A1-208ENST00000486533 ZNF73O43830 326 aaPredicted RBP5.94□□□□□ -1.46
COL12A1-208ENST00000486533 CXCL6P80162 114 aa5.94□□□□□ -1.46
COL12A1-208ENST00000486533 RYR1P21817 5038 aa5.94□□□□□ -1.46
COL12A1-208ENST00000486533 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
COL12A1-208ENST00000486533 ENHOQ6UWT2 76 aa5.93□□□□□ -1.46
COL12A1-208ENST00000486533 C6orf48Q9UBA6 75 aa5.93□□□□□ -1.46
COL12A1-208ENST00000486533 C10orf25Q5T742 122 aa5.93□□□□□ -1.46
COL12A1-208ENST00000486533 Q6ZQY7 126 aa5.93□□□□□ -1.46
COL12A1-208ENST00000486533 C1orf43Q9BWL3 253 aa5.93□□□□□ -1.46
COL12A1-208ENST00000486533 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
COL12A1-208ENST00000486533 LRP1BQ9NZR2 4599 aa5.91□□□□□ -1.46
COL12A1-208ENST00000486533 CDK2AP2O75956 126 aa5.91□□□□□ -1.46
COL12A1-208ENST00000486533 KRTAP10-2P60368 255 aa5.91□□□□□ -1.46
COL12A1-208ENST00000486533 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
COL12A1-208ENST00000486533 TRAV7A0A075B6U4 112 aa5.9□□□□□ -1.46
COL12A1-208ENST00000486533 A0A087WVE0 104 aa5.9□□□□□ -1.46
COL12A1-208ENST00000486533 A0A1B0GW54 56 aa5.9□□□□□ -1.46
COL12A1-208ENST00000486533 VPREB1P12018 145 aa5.9□□□□□ -1.46
COL12A1-208ENST00000486533 WFDC10BQ8IUB3 73 aa5.9□□□□□ -1.46
COL12A1-208ENST00000486533 LOC107984640A0A0U1RRK4 108 aa5.89□□□□□ -1.47
COL12A1-208ENST00000486533 LINC01556Q5JQF7 62 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 238.1 ms