RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TM2D3Q9BRN9 247 aa11.6□□□□□ -0.55
TNXB-205ENST00000486148 COX7BP24311 80 aa11.59□□□□□ -0.55
TNXB-205ENST00000486148 TENM3Q9P273 2699 aa11.59□□□□□ -0.55
TNXB-205ENST00000486148 BRK1Q8WUW1 75 aa11.59□□□□□ -0.55
TNXB-205ENST00000486148 ELOF1P60002 83 aaKnown RBP11.58□□□□□ -0.56
TNXB-205ENST00000486148 ANK2Q01484 3957 aa11.57□□□□□ -0.56
TNXB-205ENST00000486148 A0A0U1RQV1 116 aa11.57□□□□□ -0.56
TNXB-205ENST00000486148 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
TNXB-205ENST00000486148 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
TNXB-205ENST00000486148 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.55□□□□□ -0.56
TNXB-205ENST00000486148 M0R378 163 aa11.55□□□□□ -0.56
TNXB-205ENST00000486148 Q6ZRP5 223 aa11.54□□□□□ -0.56
TNXB-205ENST00000486148 SCXQ7RTU7 201 aa11.53□□□□□ -0.56
TNXB-205ENST00000486148 IGKV2D-24A0A075B6R9 120 aa11.53□□□□□ -0.56
TNXB-205ENST00000486148 H3BQ85 93 aa11.53□□□□□ -0.56
TNXB-205ENST00000486148 DEFB131BA0A096LNP1 70 aa11.52□□□□□ -0.57
TNXB-205ENST00000486148 CXCL6P80162 114 aa11.52□□□□□ -0.57
TNXB-205ENST00000486148 NDUFC1O43677 76 aa11.52□□□□□ -0.57
TNXB-205ENST00000486148 LINC01556Q5JQF7 62 aa11.52□□□□□ -0.57
TNXB-205ENST00000486148 C1orf195Q5TG92 126 aa11.51□□□□□ -0.57
TNXB-205ENST00000486148 PDE6GP18545 87 aa11.5□□□□□ -0.57
TNXB-205ENST00000486148 LINC00528Q8N1L1 170 aa11.5□□□□□ -0.57
TNXB-205ENST00000486148 MPLKIPQ8TAP9 179 aa11.5□□□□□ -0.57
TNXB-205ENST00000486148 ATP5EP56381 51 aaPredicted RBP11.49□□□□□ -0.57
TNXB-205ENST00000486148 C11orf45Q8TAV5 145 aa11.49□□□□□ -0.57
TNXB-205ENST00000486148 NREPQ16612 68 aa11.48□□□□□ -0.57
TNXB-205ENST00000486148 F8P00451 2351 aa11.47□□□□□ -0.57
TNXB-205ENST00000486148 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
TNXB-205ENST00000486148 KRTAP24-1Q3LI83 254 aa11.47□□□□□ -0.57
TNXB-205ENST00000486148 TMEM254Q8TBM7 123 aa11.47□□□□□ -0.57
TNXB-205ENST00000486148 CMYA5Q8N3K9 4069 aa11.46□□□□□ -0.57
TNXB-205ENST00000486148 STAB1Q9NY15 2570 aa11.46□□□□□ -0.57
TNXB-205ENST00000486148 V9GYY9 64 aa11.46□□□□□ -0.58
TNXB-205ENST00000486148 SEC61GP60059 68 aa11.45□□□□□ -0.58
TNXB-205ENST00000486148 FBN1P35555 2871 aaKnown RBP11.45□□□□□ -0.58
TNXB-205ENST00000486148 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
TNXB-205ENST00000486148 BPY2O14599 106 aa11.43□□□□□ -0.58
TNXB-205ENST00000486148 DNAH10OSP0CZ25 163 aa11.42□□□□□ -0.58
TNXB-205ENST00000486148 FLNBO75369 2602 aaKnown RBP11.42□□□□□ -0.58
TNXB-205ENST00000486148 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
TNXB-205ENST00000486148 NKAPP1Q8N9T2 125 aa11.41□□□□□ -0.58
TNXB-205ENST00000486148 Q8N9L7 120 aa11.4□□□□□ -0.58
TNXB-205ENST00000486148 KCNQ1DNQ9H478 68 aa11.4□□□□□ -0.58
TNXB-205ENST00000486148 CASC10Q5T4H9 136 aa11.39□□□□□ -0.59
TNXB-205ENST00000486148 ERC2-IT1O76042 136 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 DNAH3Q8TD57 4116 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 MAST4O15021 2626 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 PRYO14603 147 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 NOTCH1P46531 2555 aa11.37□□□□□ -0.59
TNXB-205ENST00000486148 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
TNXB-205ENST00000486148 DEFB105AQ8NG35 78 aa11.36□□□□□ -0.59
TNXB-205ENST00000486148 OCR1Q9BZK8 76 aa11.35□□□□□ -0.59
TNXB-205ENST00000486148 RPL37AP8A6NKH3 93 aa11.34□□□□□ -0.59
TNXB-205ENST00000486148 PRB2P02812 416 aaPredicted RBP11.34□□□□□ -0.59
TNXB-205ENST00000486148 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
TNXB-205ENST00000486148 FUSP35637 526 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNXB-205ENST00000486148 Q8N377 158 aa11.33□□□□□ -0.59
TNXB-205ENST00000486148 IGKV4-1P06312 121 aa11.33□□□□□ -0.6
TNXB-205ENST00000486148 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
TNXB-205ENST00000486148 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
TNXB-205ENST00000486148 PLA2G2DQ9UNK4 145 aa11.31□□□□□ -0.6
TNXB-205ENST00000486148 KRTAP4-16G5E9R7 235 aaPredicted RBP11.3□□□□□ -0.6
TNXB-205ENST00000486148 Q9BRP9 147 aa11.3□□□□□ -0.6
TNXB-205ENST00000486148 DNAH1Q9P2D7 4330 aa11.29□□□□□ -0.6
TNXB-205ENST00000486148 Q6ZRX8 168 aa11.29□□□□□ -0.6
TNXB-205ENST00000486148 IGLV1-50A0A075B6I6 118 aa11.29□□□□□ -0.6
TNXB-205ENST00000486148 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
TNXB-205ENST00000486148 IGLV5-37A0A075B6J1 123 aa11.27□□□□□ -0.61
TNXB-205ENST00000486148 IGLV5-48A0A075B6I7 105 aa11.26□□□□□ -0.61
TNXB-205ENST00000486148 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
TNXB-205ENST00000486148 LRCOL1A6NCL2 159 aa11.25□□□□□ -0.61
TNXB-205ENST00000486148 SPRR1AP35321 89 aa11.25□□□□□ -0.61
TNXB-205ENST00000486148 ST20-AS1Q8NBB2 130 aa11.25□□□□□ -0.61
TNXB-205ENST00000486148 ETDCA0A1B0GVM5 59 aa11.24□□□□□ -0.61
TNXB-205ENST00000486148 NBEAL1Q6ZS30 2694 aa11.24□□□□□ -0.61
TNXB-205ENST00000486148 hDV103S1A0JD37 113 aa11.23□□□□□ -0.61
TNXB-205ENST00000486148 PRR15Q8IV56 129 aa11.23□□□□□ -0.61
TNXB-205ENST00000486148 HUWE1Q7Z6Z7 4374 aaKnown RBP11.22□□□□□ -0.61
TNXB-205ENST00000486148 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
TNXB-205ENST00000486148 MRPL55Q7Z7F7 128 aaKnown RBP11.22□□□□□ -0.61
TNXB-205ENST00000486148 A0A1W2PNM2 257 aa11.2□□□□□ -0.62
TNXB-205ENST00000486148 K7EIL1 84 aa11.2□□□□□ -0.62
TNXB-205ENST00000486148 TNP2Q05952 138 aa11.2□□□□□ -0.62
TNXB-205ENST00000486148 PMAIP1Q13794 54 aa11.19□□□□□ -0.62
TNXB-205ENST00000486148 FAM30AQ9NZY2 134 aa11.19□□□□□ -0.62
TNXB-205ENST00000486148 COL6A5A8TX70 2615 aa11.18□□□□□ -0.62
TNXB-205ENST00000486148 C1orf137Q5JT78 98 aa11.17□□□□□ -0.62
TNXB-205ENST00000486148 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
TNXB-205ENST00000486148 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
TNXB-205ENST00000486148 Q1T7F1 81 aa11.16□□□□□ -0.62
TNXB-205ENST00000486148 UBE2BP63146 152 aa11.16□□□□□ -0.62
TNXB-205ENST00000486148 KRTAP1-5Q9BYS1 174 aa11.13□□□□□ -0.63
TNXB-205ENST00000486148 PSPHP1O15172 72 aa11.13□□□□□ -0.63
TNXB-205ENST00000486148 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
TNXB-205ENST00000486148 DNAH10Q8IVF4 4471 aa11.12□□□□□ -0.63
TNXB-205ENST00000486148 LCE6AA0A183 80 aa11.12□□□□□ -0.63
TNXB-205ENST00000486148 Q8NBF4 154 aa11.12□□□□□ -0.63
TNXB-205ENST00000486148 LYSTQ99698 3801 aa11.11□□□□□ -0.63
TNXB-205ENST00000486148 A0A096LNI7 61 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms