RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 KLK9Q2XQG4 91 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 LCN9Q8WX39 176 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 TMEM203Q969S6 136 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 CHD7Q9P2D1 2997 aa-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 SPTBN5Q9NRC6 3674 aaKnown RBP-0.35□□□□□ -2.47
SCAF11-207ENST00000484275 CEP290O15078 2479 aa-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 ABCC2Q92887 1545 aa-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 MRPS10P82664 201 aaKnown RBP-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 SARNPP82979 210 aaKnown RBP-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 SFTA2Q6UW10 78 aa-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 CGREF1Q99674 301 aa-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 DNAH11Q96DT5 4516 aa-0.36□□□□□ -2.47
SCAF11-207ENST00000484275 ALKQ9UM73 1620 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 DNAH14Q0VDD8 3507 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 USP34Q70CQ2 3546 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 ANKRD26Q9UPS8 1709 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 A0A1B0GU69 56 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 S100A1P23297 94 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 KRTAP19-8Q3LI54 63 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 C2orf88Q9BSF0 95 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 DNAH10Q8IVF4 4471 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 RGPD3A6NKT7 1758 aaPredicted RBP-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 RGPD4Q7Z3J3 1758 aa-0.37□□□□□ -2.47
SCAF11-207ENST00000484275 SPG11Q96JI7 2443 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 A0A087WVE0 104 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 CPSF4LA6NMK7 179 aaKnown RBP-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 H3BQF6 201 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 SPRR2AP35326 72 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 GTF2H5Q6ZYL4 71 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 C6orf201Q7Z4U5 140 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 VAMP8Q9BV40 100 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 GNG8Q9UK08 70 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 APLNQ9ULZ1 77 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 MLH3Q9UHC1 1453 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 PREX1Q8TCU6 1659 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 AKAP12Q02952 1782 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 ATMQ13315 3056 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 VPS13CQ709C8 3753 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 CEP350Q5VT06 3117 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 FRYQ5TBA9 3013 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 SLIT1O75093 1534 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 PRDM15P57071 1507 aaPredicted RBP-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 ABCC5O15440 1437 aa-0.38□□□□□ -2.47
SCAF11-207ENST00000484275 ADGRG4Q8IZF6 3080 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 DMXL1Q9Y485 3027 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 FYCO1Q9BQS8 1478 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 PDE4DIPQ5VU43 2346 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 TMEM262E9PQX1 116 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 SNCAP37840 140 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 DEFB135Q30KP9 77 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 CRIPTQ9P021 101 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 RANBP2P49792 3224 aaKnown RBP-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 SUPT6HQ7KZ85 1726 aaKnown RBP-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 PTPN23Q9H3S7 1636 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 ASPMQ8IZT6 3477 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 UBR3Q6ZT12 1888 aa-0.39□□□□□ -2.47
SCAF11-207ENST00000484275 ADAMTS12P58397 1594 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 NBASA2RRP1 2371 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 RAPGEF2Q9Y4G8 1499 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 C4AP0C0L4 1744 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 C4BP0C0L5 1744 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 hADV29S1A0JD25 119 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 H0Y9P7 68 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 I3L3M4 83 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 NDUFC1O43677 76 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.4□□□□□ -2.475e-6■■■■□ 26.6
SCAF11-207ENST00000484275 FRYLO94915 3013 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 UTRNP46939 3433 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 RGPD8O14715 1765 aaPredicted RBP-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 RGPD5Q99666 1765 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 NCOA3Q9Y6Q9 1424 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 SAMD9Q5K651 1589 aa-0.4□□□□□ -2.47
SCAF11-207ENST00000484275 PRUNE2Q8WUY3 3088 aa-0.41□□□□□ -2.47
SCAF11-207ENST00000484275 UBR1Q8IWV7 1749 aa-0.41□□□□□ -2.47
SCAF11-207ENST00000484275 SPTAN1Q13813 2472 aaKnown RBP-0.41□□□□□ -2.47
SCAF11-207ENST00000484275 BRCA2P51587 3418 aa-0.41□□□□□ -2.47
SCAF11-207ENST00000484275 TRBV25-1A0A075B6N4 114 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 A0A0G2JND7 137 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 C7orf77A4D0Y5 90 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 LINC00587B1AMM8 73 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 HSD52Q0P140 79 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 PMCHL1Q16048 86 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 KRTAP6-2Q3LI66 62 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 H1FX-AS1Q4G0G2 97 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 PSMG4Q5JS54 123 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 CACFD1Q9UGQ2 172 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 CDH23Q9H251 3354 aa-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 MKI67P46013 3256 aaKnown RBP-0.41□□□□□ -2.48
SCAF11-207ENST00000484275 MYO3AQ8NEV4 1616 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 CCL22O00626 93 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 MPC2O95563 127 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 SPRR2EP22531 72 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 GNGT1P63211 74 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 DEFB107AQ8IZN7 70 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 C9orf62Q8N4C0 152 aa-0.42□□□□□ -2.48
SCAF11-207ENST00000484275 XIRP2A4UGR9 3374 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 TRAV30A0A087WSZ9 112 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 C20orf202A1L168 122 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 UQCRHP07919 91 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 MRPL34Q9BQ48 92 aaKnown RBP-0.43□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms