RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TCAPO15273 167 aa3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 HINT1P49773 126 aaPredicted RBP3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 CKS1BP61024 79 aa3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 MRPS36P82909 103 aaKnown RBP3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC01545Q5VT33 79 aa3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 MRPL55Q7Z7F7 128 aaKnown RBP3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 TOMM7Q9P0U1 55 aa3.45□□□□□ -1.86
SEMA3D-204ENST00000484038 PPBPP02775 128 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 UBE2AP49459 152 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 IFI27L1Q96BM0 104 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 C20orf78Q9BR46 151 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 SMIM2Q9BVW6 85 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 LAMTOR2Q9Y2Q5 125 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 IGKV2D-26A0A0A0MRZ7 120 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC01546A6NGU7 62 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 Q8N8P6 123 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 Q8NBF4 154 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 PPDPFQ9H3Y8 114 aa3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 NXT2Q9NPJ8 142 aaKnown RBP3.44□□□□□ -1.86
SEMA3D-204ENST00000484038 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 RPL32P62910 135 aaKnown RBP3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 FAM229BQ4G0N7 80 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 C6orf226Q5I0X4 101 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 COL5A1-AS1Q5SY13 56 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 SLC25A34Q6PIV7 304 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 Q6ZVH6 145 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 TMEM141Q96I45 108 aa3.43□□□□□ -1.86
SEMA3D-204ENST00000484038 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
SEMA3D-204ENST00000484038 COX8AP10176 69 aa3.42□□□□□ -1.86
SEMA3D-204ENST00000484038 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
SEMA3D-204ENST00000484038 C2orf91Q6ZV80 131 aa3.42□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
SEMA3D-204ENST00000484038 F8VRH5 84 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 NMUP48645 174 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 ERASQ7Z444 233 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 Q8IZM0 81 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC01561Q8N1V8 128 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 LINC00337Q8N6G1 96 aa3.41□□□□□ -1.86
SEMA3D-204ENST00000484038 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 ATP5LO75964 103 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 IGKV2D-28P01615 120 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 PRLHP81277 87 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 BVES-AS1Q5T3Y7 98 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 KRTAP13-1Q8IUC0 172 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 PCP2Q8IVA1 136 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 NKAPP1Q8N9T2 125 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.86
SEMA3D-204ENST00000484038 DLEU1O43261 78 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 DPM2O94777 84 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 IGKCP01834 107 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 C3orf22Q8N5N4 141 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 TOMM6Q96B49 74 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 CXCL5P42830 114 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 ORMDL2Q53FV1 153 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 C2orf66Q6UXQ4 117 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 FAM19A1Q7Z5A9 133 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 BOD1L2Q8IYS8 172 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 GEMIN7Q9H840 131 aaKnown RBP3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 CYSLTR1Q9Y271 337 aa3.39□□□□□ -1.87
SEMA3D-204ENST00000484038 TAX1BP3O14907 124 aa3.38□□□□□ -1.87
SEMA3D-204ENST00000484038 HERVK_113P63121 156 aa3.38□□□□□ -1.87
SEMA3D-204ENST00000484038 KRTAP13-3Q3SY46 172 aa3.38□□□□□ -1.87
SEMA3D-204ENST00000484038 AMELXQ99217 191 aa3.38□□□□□ -1.87
SEMA3D-204ENST00000484038 TRAV12-1A0A0B4J245 112 aa3.37□□□□□ -1.87
SEMA3D-204ENST00000484038 SEC11AP67812 179 aa3.37□□□□□ -1.87
SEMA3D-204ENST00000484038 HSD52Q0P140 79 aa3.37□□□□□ -1.87
SEMA3D-204ENST00000484038 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
SEMA3D-204ENST00000484038 K7EMI3 77 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 PLNP26678 52 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 VAMP3Q15836 100 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 FAM19A3Q7Z5A8 133 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 Q8N377 158 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 COX7B2Q8TF08 81 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 PLEKHB2Q96CS7 222 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 HIGD2AQ9BW72 106 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 TMEM126AQ9H061 195 aa3.36□□□□□ -1.87
SEMA3D-204ENST00000484038 IGIPA6NJ69 53 aa3.35□□□□□ -1.87
SEMA3D-204ENST00000484038 C11orf86A6NJI1 115 aa3.35□□□□□ -1.87
SEMA3D-204ENST00000484038 DAND5Q8N907 189 aa3.35□□□□□ -1.87
SEMA3D-204ENST00000484038 RAB37Q96AX2 223 aa3.35□□□□□ -1.87
SEMA3D-204ENST00000484038 K7ERJ3 54 aa3.34□□□□□ -1.87
SEMA3D-204ENST00000484038 M0R378 163 aa3.34□□□□□ -1.87
SEMA3D-204ENST00000484038 PFN2P35080 140 aa3.34□□□□□ -1.87
SEMA3D-204ENST00000484038 FXYD2P54710 66 aa3.34□□□□□ -1.87
SEMA3D-204ENST00000484038 CST9LQ9H4G1 147 aa3.34□□□□□ -1.87
SEMA3D-204ENST00000484038 MYMXA0A1B0GTQ4 84 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 A6NDN8 102 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 E9PLD3 99 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 H3BRM9 83 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 SPINK8P0C7L1 97 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 PMVKQ15126 192 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms