RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
UBR4-213ENST00000483922 SPANXB1Q9NS25 103 aaPredicted RBP6.77□□□□□ -1.33
UBR4-213ENST00000483922 H7C2G1 150 aa6.76□□□□□ -1.33
UBR4-213ENST00000483922 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
UBR4-213ENST00000483922 C1orf195Q5TG92 126 aa6.76□□□□□ -1.33
UBR4-213ENST00000483922 MAP1LC3CQ9BXW4 147 aa6.76□□□□□ -1.33
UBR4-213ENST00000483922 C5orf52A6NGY3 159 aa6.75□□□□□ -1.33
UBR4-213ENST00000483922 NDUFC2O95298 119 aa6.75□□□□□ -1.33
UBR4-213ENST00000483922 S100A7L2Q5SY68 101 aa6.75□□□□□ -1.33
UBR4-213ENST00000483922 UQCC3Q6UW78 93 aa6.75□□□□□ -1.33
UBR4-213ENST00000483922 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
UBR4-213ENST00000483922 C10orf91Q5T1B1 145 aa6.74□□□□□ -1.33
UBR4-213ENST00000483922 ADAMTSL4-AS1Q5T5F5 129 aa6.74□□□□□ -1.33
UBR4-213ENST00000483922 LEPROTO15243 131 aa6.73□□□□□ -1.33
UBR4-213ENST00000483922 NPC2P61916 151 aa6.73□□□□□ -1.33
UBR4-213ENST00000483922 IFITM2Q01629 132 aa6.71□□□□□ -1.34
UBR4-213ENST00000483922 CD164Q04900 197 aa6.71□□□□□ -1.34
UBR4-213ENST00000483922 Q5XG85 94 aa6.71□□□□□ -1.34
UBR4-213ENST00000483922 SMIM29Q86T20 159 aa6.71□□□□□ -1.34
UBR4-213ENST00000483922 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
UBR4-213ENST00000483922 J3QQQ9 107 aa6.7□□□□□ -1.34
UBR4-213ENST00000483922 CHCHD1Q96BP2 118 aaKnown RBP6.7□□□□□ -1.34
UBR4-213ENST00000483922 Q1RN00 199 aa6.69□□□□□ -1.34
UBR4-213ENST00000483922 LAMTOR3Q9UHA4 124 aa6.69□□□□□ -1.34
UBR4-213ENST00000483922 H0Y8G0 127 aa6.68□□□□□ -1.34
UBR4-213ENST00000483922 RHEBQ15382 184 aa6.68□□□□□ -1.34
UBR4-213ENST00000483922 YPEL4Q96NS1 127 aa6.67□□□□□ -1.34
UBR4-213ENST00000483922 MIEN1Q9BRT3 115 aa6.67□□□□□ -1.34
UBR4-213ENST00000483922 PRO1933Q9H354 126 aa6.67□□□□□ -1.34
UBR4-213ENST00000483922 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
UBR4-213ENST00000483922 SLC25A34Q6PIV7 304 aa6.66□□□□□ -1.34
UBR4-213ENST00000483922 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
UBR4-213ENST00000483922 DHRS4-AS1Q9P1J3 65 aa6.66□□□□□ -1.34
UBR4-213ENST00000483922 LINC00310P59036 64 aa6.65□□□□□ -1.34
UBR4-213ENST00000483922 Q6Q795 121 aa6.65□□□□□ -1.34
UBR4-213ENST00000483922 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
UBR4-213ENST00000483922 LITAFQ99732 161 aa6.65□□□□□ -1.34
UBR4-213ENST00000483922 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.34
UBR4-213ENST00000483922 MACF1Q9UPN3 7388 aaKnown RBP6.64□□□□□ -1.35
UBR4-213ENST00000483922 LCE2BO14633 110 aa6.64□□□□□ -1.35
UBR4-213ENST00000483922 NMUP48645 174 aa6.64□□□□□ -1.35
UBR4-213ENST00000483922 HINT1P49773 126 aaPredicted RBP6.64□□□□□ -1.35
UBR4-213ENST00000483922 ELOF1P60002 83 aaKnown RBP6.64□□□□□ -1.35
UBR4-213ENST00000483922 AKR1D1P51857 326 aa6.63□□□□□ -1.35
UBR4-213ENST00000483922 TAL2Q16559 108 aa6.63□□□□□ -1.35
UBR4-213ENST00000483922 COMMD7Q86VX2 200 aa6.63□□□□□ -1.35
UBR4-213ENST00000483922 TEX49A0A1B0GTD5 131 aa6.62□□□□□ -1.35
UBR4-213ENST00000483922 CFC1P0CG37 223 aa6.62□□□□□ -1.35
UBR4-213ENST00000483922 LGALS3P17931 250 aaKnown RBP6.62□□□□□ -1.35
UBR4-213ENST00000483922 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
UBR4-213ENST00000483922 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
UBR4-213ENST00000483922 HSBP1O75506 76 aa6.61□□□□□ -1.35
UBR4-213ENST00000483922 COX7BP24311 80 aa6.61□□□□□ -1.35
UBR4-213ENST00000483922 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
UBR4-213ENST00000483922 MT2AP02795 61 aa6.6□□□□□ -1.35
UBR4-213ENST00000483922 PLNP26678 52 aa6.6□□□□□ -1.35
UBR4-213ENST00000483922 DPM2O94777 84 aa6.59□□□□□ -1.35
UBR4-213ENST00000483922 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
UBR4-213ENST00000483922 SPANXCQ9NY87 97 aa6.59□□□□□ -1.35
UBR4-213ENST00000483922 IGLV5-48A0A075B6I7 105 aa6.58□□□□□ -1.36
UBR4-213ENST00000483922 IGKCP01834 107 aa6.58□□□□□ -1.36
UBR4-213ENST00000483922 HERVK_113P61574 105 aa6.57□□□□□ -1.36
UBR4-213ENST00000483922 SPANXDQ9BXN6 97 aa6.57□□□□□ -1.36
UBR4-213ENST00000483922 CBY1Q9Y3M2 126 aa6.57□□□□□ -1.36
UBR4-213ENST00000483922 E9PLD3 99 aa6.56□□□□□ -1.36
UBR4-213ENST00000483922 SERF1AO75920 110 aa6.56□□□□□ -1.36
UBR4-213ENST00000483922 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
UBR4-213ENST00000483922 APOC3P02656 99 aa6.55□□□□□ -1.36
UBR4-213ENST00000483922 MT1FP04733 61 aa6.55□□□□□ -1.36
UBR4-213ENST00000483922 FABP4P15090 132 aa6.55□□□□□ -1.36
UBR4-213ENST00000483922 Q75L30 129 aa6.55□□□□□ -1.36
UBR4-213ENST00000483922 OBSCN-AS1Q96MR7 158 aa6.54□□□□□ -1.36
UBR4-213ENST00000483922 ATP11AUNQ6ZP68 121 aa6.53□□□□□ -1.36
UBR4-213ENST00000483922 TRBV7-6A0A0J9YX20 115 aa6.52□□□□□ -1.37
UBR4-213ENST00000483922 TIMM17BO60830 172 aa6.52□□□□□ -1.37
UBR4-213ENST00000483922 TCL1BO95988 128 aa6.52□□□□□ -1.37
UBR4-213ENST00000483922 TRGC2P03986 189 aa6.52□□□□□ -1.37
UBR4-213ENST00000483922 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
UBR4-213ENST00000483922 PCP2Q8IVA1 136 aa6.51□□□□□ -1.37
UBR4-213ENST00000483922 C20orf202A1L168 122 aa6.5□□□□□ -1.37
UBR4-213ENST00000483922 HSPB8Q9UJY1 196 aa6.5□□□□□ -1.37
UBR4-213ENST00000483922 SNAPINO95295 136 aa6.49□□□□□ -1.37
UBR4-213ENST00000483922 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
UBR4-213ENST00000483922 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
UBR4-213ENST00000483922 SVBPQ8N300 66 aa6.47□□□□□ -1.37
UBR4-213ENST00000483922 TRBV7-7A0A0K0K1E9 115 aa6.45□□□□□ -1.38
UBR4-213ENST00000483922 ZNF815PA8K554 130 aa6.45□□□□□ -1.38
UBR4-213ENST00000483922 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
UBR4-213ENST00000483922 Q96NJ1 140 aa6.45□□□□□ -1.38
UBR4-213ENST00000483922 IGFL1Q6UW32 110 aa6.44□□□□□ -1.38
UBR4-213ENST00000483922 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
UBR4-213ENST00000483922 SYS1-DBNDD2H3BUS1 97 aa6.43□□□□□ -1.38
UBR4-213ENST00000483922 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
UBR4-213ENST00000483922 A6NDN8 102 aa6.42□□□□□ -1.38
UBR4-213ENST00000483922 A8MUU9 505 aa6.42□□□□□ -1.38
UBR4-213ENST00000483922 SMIM11BQ8TCY0 68 aa6.42□□□□□ -1.38
UBR4-213ENST00000483922 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
UBR4-213ENST00000483922 LINC01545Q5VT33 79 aa6.4□□□□□ -1.38
UBR4-213ENST00000483922 MUSTN1Q8IVN3 82 aa6.4□□□□□ -1.38
UBR4-213ENST00000483922 A4D1N5 150 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms