RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ABCA12Q86UK0 2595 aa6.8□□□□□ -1.32
COL12A1-207ENST00000483888 POLQO75417 2590 aa6.8□□□□□ -1.32
COL12A1-207ENST00000483888 ANKRD17O75179 2603 aaKnown RBP6.79□□□□□ -1.32
COL12A1-207ENST00000483888 INAFM1C9JVW0 142 aa6.79□□□□□ -1.32
COL12A1-207ENST00000483888 PRR26Q8N8Z3 221 aa6.79□□□□□ -1.32
COL12A1-207ENST00000483888 DSCR10P59022 87 aa6.78□□□□□ -1.32
COL12A1-207ENST00000483888 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
COL12A1-207ENST00000483888 A0A0G2JQZ4 141 aa6.78□□□□□ -1.32
COL12A1-207ENST00000483888 A0A1W2PNN7 141 aa6.78□□□□□ -1.32
COL12A1-207ENST00000483888 NOTCH2Q04721 2471 aa6.77□□□□□ -1.33
COL12A1-207ENST00000483888 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
COL12A1-207ENST00000483888 PRRC2CQ9Y520 2896 aaKnown RBP6.77□□□□□ -1.33
COL12A1-207ENST00000483888 LINC01558Q9Y6Z2 57 aa6.76□□□□□ -1.33
COL12A1-207ENST00000483888 NAV2Q8IVL1 2488 aa6.75□□□□□ -1.33
COL12A1-207ENST00000483888 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
COL12A1-207ENST00000483888 SPINK7P58062 85 aa6.74□□□□□ -1.33
COL12A1-207ENST00000483888 USP9XQ93008 2570 aaPredicted RBP6.73□□□□□ -1.33
COL12A1-207ENST00000483888 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
COL12A1-207ENST00000483888 COL4A2P08572 1712 aa6.72□□□□□ -1.33
COL12A1-207ENST00000483888 A0A1W2PNM2 257 aa6.71□□□□□ -1.33
COL12A1-207ENST00000483888 Q8NAQ8 132 aa6.71□□□□□ -1.34
COL12A1-207ENST00000483888 SPTBN4Q9H254 2564 aa6.7□□□□□ -1.34
COL12A1-207ENST00000483888 TYMSOSQ8TAI1 123 aa6.7□□□□□ -1.34
COL12A1-207ENST00000483888 RTL8CO15255 209 aa6.69□□□□□ -1.34
COL12A1-207ENST00000483888 Q8N1X5 172 aa6.69□□□□□ -1.34
COL12A1-207ENST00000483888 JMJD1CQ15652 2540 aa6.68□□□□□ -1.34
COL12A1-207ENST00000483888 A0A1B0GU33 70 aa6.68□□□□□ -1.34
COL12A1-207ENST00000483888 A0A0C4DFX4 3053 aa6.67□□□□□ -1.34
COL12A1-207ENST00000483888 CHD8Q9HCK8 2581 aa6.67□□□□□ -1.34
COL12A1-207ENST00000483888 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
COL12A1-207ENST00000483888 H3BNG1 76 aa6.66□□□□□ -1.34
COL12A1-207ENST00000483888 TLX1NBP0CAT3 122 aa6.66□□□□□ -1.34
COL12A1-207ENST00000483888 C16orf95Q9H693 158 aa6.66□□□□□ -1.34
COL12A1-207ENST00000483888 C15orf56Q8N910 161 aa6.66□□□□□ -1.34
COL12A1-207ENST00000483888 IGLV5-48A0A075B6I7 105 aa6.65□□□□□ -1.35
COL12A1-207ENST00000483888 DNAH12Q6ZR08 3092 aa6.62□□□□□ -1.35
COL12A1-207ENST00000483888 MTORP42345 2549 aa6.61□□□□□ -1.35
COL12A1-207ENST00000483888 HRES1P13985 223 aa6.61□□□□□ -1.35
COL12A1-207ENST00000483888 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
COL12A1-207ENST00000483888 SPRR4Q96PI1 79 aa6.61□□□□□ -1.35
COL12A1-207ENST00000483888 USP9YO00507 2555 aaPredicted RBP6.6□□□□□ -1.35
COL12A1-207ENST00000483888 PLA2G2DQ9UNK4 145 aa6.6□□□□□ -1.35
COL12A1-207ENST00000483888 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
COL12A1-207ENST00000483888 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
COL12A1-207ENST00000483888 UTRNP46939 3433 aa6.59□□□□□ -1.36
COL12A1-207ENST00000483888 GOLGB1Q14789 3259 aaKnown RBP6.59□□□□□ -1.36
COL12A1-207ENST00000483888 DNAH10OSP0CZ25 163 aa6.58□□□□□ -1.36
COL12A1-207ENST00000483888 CNBPP62633 177 aaKnown RBP6.58□□□□□ -1.36
COL12A1-207ENST00000483888 PIEZO1Q92508 2521 aa6.58□□□□□ -1.36
COL12A1-207ENST00000483888 IGF2RP11717 2491 aa6.58□□□□□ -1.36
COL12A1-207ENST00000483888 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
COL12A1-207ENST00000483888 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
COL12A1-207ENST00000483888 A0A096LNT2 108 aa6.56□□□□□ -1.36
COL12A1-207ENST00000483888 PRR34Q9NV39 138 aa6.56□□□□□ -1.36
COL12A1-207ENST00000483888 SMR3AQ99954 134 aa6.56□□□□□ -1.36
COL12A1-207ENST00000483888 ZNF575Q86XF7 245 aa6.55□□□□□ -1.36
COL12A1-207ENST00000483888 PCNTO95613 3336 aa6.55□□□□□ -1.36
COL12A1-207ENST00000483888 A6NN06 94 aa6.54□□□□□ -1.36
COL12A1-207ENST00000483888 KLK9Q2XQG4 91 aa6.54□□□□□ -1.36
COL12A1-207ENST00000483888 ROMO1P60602 79 aa6.53□□□□□ -1.36
COL12A1-207ENST00000483888 ANAPC11Q9NYG5 84 aa6.52□□□□□ -1.37
COL12A1-207ENST00000483888 ZNF861PO60384 105 aa6.51□□□□□ -1.37
COL12A1-207ENST00000483888 NCOR2Q9Y618 2525 aa6.51□□□□□ -1.37
COL12A1-207ENST00000483888 C10orf142B7Z368 130 aa6.49□□□□□ -1.37
COL12A1-207ENST00000483888 USP24Q9UPU5 2620 aa6.49□□□□□ -1.37
COL12A1-207ENST00000483888 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
COL12A1-207ENST00000483888 ANKRD11Q6UB99 2663 aaPredicted RBP6.48□□□□□ -1.37
COL12A1-207ENST00000483888 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
COL12A1-207ENST00000483888 NBDYA0A0U1RRE5 68 aa6.47□□□□□ -1.37
COL12A1-207ENST00000483888 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.37
COL12A1-207ENST00000483888 CFAP54Q96N23 3096 aa6.46□□□□□ -1.37
COL12A1-207ENST00000483888 KRTAP10-9P60411 292 aa6.46□□□□□ -1.38
COL12A1-207ENST00000483888 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.38
COL12A1-207ENST00000483888 GIG44P09565 113 aaPredicted RBP6.46□□□□□ -1.38
COL12A1-207ENST00000483888 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
COL12A1-207ENST00000483888 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
COL12A1-207ENST00000483888 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
COL12A1-207ENST00000483888 KRTAP25-1Q3LHN0 102 aa6.43□□□□□ -1.38
COL12A1-207ENST00000483888 AKAP13Q12802 2813 aa6.42□□□□□ -1.38
COL12A1-207ENST00000483888 C5orf42Q9H799 3197 aa6.42□□□□□ -1.38
COL12A1-207ENST00000483888 EP400Q96L91 3159 aa6.41□□□□□ -1.38
COL12A1-207ENST00000483888 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
COL12A1-207ENST00000483888 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.39
COL12A1-207ENST00000483888 EPG5Q9HCE0 2579 aa6.4□□□□□ -1.39
COL12A1-207ENST00000483888 RPL37P61927 97 aaKnown RBP6.38□□□□□ -1.39
COL12A1-207ENST00000483888 PSORS1C2Q9UIG4 136 aa6.38□□□□□ -1.39
COL12A1-207ENST00000483888 Q5W150 140 aa6.38□□□□□ -1.39
COL12A1-207ENST00000483888 DMBT1Q9UGM3 2413 aaPredicted RBP6.37□□□□□ -1.39
COL12A1-207ENST00000483888 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
COL12A1-207ENST00000483888 CEP295Q9C0D2 2601 aa6.36□□□□□ -1.39
COL12A1-207ENST00000483888 A8MU10 97 aa6.36□□□□□ -1.39
COL12A1-207ENST00000483888 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
COL12A1-207ENST00000483888 Q8NDZ9 215 aa6.35□□□□□ -1.39
COL12A1-207ENST00000483888 CEP350Q5VT06 3117 aa6.34□□□□□ -1.39
COL12A1-207ENST00000483888 COX6B2Q6YFQ2 88 aa6.34□□□□□ -1.39
COL12A1-207ENST00000483888 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
COL12A1-207ENST00000483888 CASC10Q5T4H9 136 aa6.32□□□□□ -1.4
COL12A1-207ENST00000483888 FASNP49327 2511 aaKnown RBP6.32□□□□□ -1.4
COL12A1-207ENST00000483888 ZCCHC13Q8WW36 166 aaKnown RBP6.32□□□□□ -1.4
COL12A1-207ENST00000483888 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 217.7 ms