RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 C9orf116Q5BN46 136 aaPredicted RBP1.33□□□□□ -2.2
MCF2-207ENST00000483690 DEFB121Q5J5C9 76 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 RPL7L1Q6DKI1 246 aaKnown RBP1.33□□□□□ -2.2
MCF2-207ENST00000483690 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 FAM167A-AS1Q96KT0 104 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 V9GYH0 126 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 RELNP78509 3460 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 DOCK11Q5JSL3 2073 aa1.33□□□□□ -2.2
MCF2-207ENST00000483690 PRRC2CQ9Y520 2896 aaKnown RBP1.33□□□□□ -2.2
MCF2-207ENST00000483690 BOD1L1Q8NFC6 3051 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 NF1P21359 2839 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 F8P00451 2351 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 TRBV7-3A0A075B6L6 115 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 A6NIN4 97 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 SNRPGP15A8MWD9 76 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 COX8AP10176 69 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 DYNLRB1Q9NP97 96 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 SPG11Q96JI7 2443 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 NBEAL1Q6ZS30 2694 aa1.32□□□□□ -2.2
MCF2-207ENST00000483690 UTP20O75691 2785 aaKnown RBP1.31□□□□□ -2.2
MCF2-207ENST00000483690 CENPEQ02224 2701 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 FLNCQ14315 2725 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 A0A0G2JND7 137 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 HCG22E2RYF7 251 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 C3orf79P0CE67 100 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 NDUFA11Q86Y39 141 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 PRO1854Q9UHT4 67 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 USP9YO00507 2555 aaPredicted RBP1.31□□□□□ -2.2
MCF2-207ENST00000483690 ANK2Q01484 3957 aa1.31□□□□□ -2.2
MCF2-207ENST00000483690 MTORP42345 2549 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 ANK3Q12955 4377 aaKnown RBP1.3□□□□□ -2.2
MCF2-207ENST00000483690 TRBV25-1A0A075B6N4 114 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 CXorf51AA0A1B0GTR3 108 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 HMGN2P05204 90 aaKnown RBP1.3□□□□□ -2.2
MCF2-207ENST00000483690 COX6CP09669 75 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 COX6B1P14854 86 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 ZNF56Q15929 161 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 C6orf201Q7Z4U5 140 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 FAM223AQ8IWN6 122 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 SPTSSBQ8NFR3 76 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 MANBALQ9NQG1 85 aa1.3□□□□□ -2.2
MCF2-207ENST00000483690 FXYD6-FXYD2A0A087WZ82 144 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 TRAV22A0A0B4J277 110 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 MYMXA0A1B0GTQ4 84 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 HIGD1CA8MV81 97 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 FXYD1O00168 92 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 HMGA1P17096 107 aaKnown RBP1.29□□□□□ -2.2
MCF2-207ENST00000483690 GCHFRP30047 84 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 Q5VV11 94 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 C10orf99Q6UWK7 81 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 ZNF818PQ6ZRF7 136 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 SMR3AQ99954 134 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 BPESC1Q9GZL8 116 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 FXYD6Q9H0Q3 95 aa1.29□□□□□ -2.2
MCF2-207ENST00000483690 SPTBN1Q01082 2364 aaKnown RBP1.29□□□□□ -2.2
MCF2-207ENST00000483690 ANKHD1Q8IWZ3 2542 aaKnown RBP1.29□□□□□ -2.2
MCF2-207ENST00000483690 ANKRD36A6QL64 1941 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 HIVEP1P15822 2718 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 ITPR2Q14571 2701 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 OTOGQ6ZRI0 2925 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 A0A1B0GWA3 101 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 TMEM14DPA8MWL7 114 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 IQCF6A8MYZ5 107 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 F8WEM9 126 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 EDDM3BP56851 147 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 PLGLAQ15195 96 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 Q6JHZ5 121 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 IFI27L1Q96BM0 104 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 CDC42SE2Q9NRR3 84 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 HILPDAQ9Y5L2 63 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 DNHD1Q96M86 4753 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 MAP1AP78559 2803 aaPredicted RBP1.28□□□□□ -2.2
MCF2-207ENST00000483690 LRBAP50851 2863 aa1.28□□□□□ -2.2
MCF2-207ENST00000483690 CELSR2Q9HCU4 2923 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 TRAV12-3A0A0B4J271 114 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 TEX49A0A1B0GTD5 131 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 LOC101927531A0A1B0GV80 90 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 LOC285095A0A1B0GVY8 99 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 FAM223BA6NKX1 122 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 CEBPZOSA8MTT3 80 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 UBE2D1P51668 147 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 FXYD3Q14802 87 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 DEFB109BQ30KR1 87 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 C10orf128Q5T292 105 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 ATP5EP2Q5VTU8 51 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 DMAC1Q96GE9 116 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 LINC00208Q96KT6 92 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 TMEM14BQ9NUH8 114 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 TACC2O95359 2948 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 ATRQ13535 2644 aa1.27□□□□□ -2.21
MCF2-207ENST00000483690 STAB1Q9NY15 2570 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 TRBV10-1A0A0K0K1A3 114 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 ZNF815PA8K554 130 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 CHKB-CPT1BH3BT56 60 aa1.26□□□□□ -2.21
MCF2-207ENST00000483690 IFI27P40305 119 aaPredicted RBP1.26□□□□□ -2.21
MCF2-207ENST00000483690 ELOF1P60002 83 aaKnown RBP1.26□□□□□ -2.21
MCF2-207ENST00000483690 BAGE3Q86Y29 109 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms