RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
LRCH3-217ENST00000483442 KTN1-AS1Q86SY8 53 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BAQ96A08 127 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 TOMM6Q96B49 74 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 IMUPQ9GZP8 106 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 CDC42SE2Q9NRR3 84 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 MRPL35Q9NZE8 188 aaKnown RBP1.94□□□□□ -2.1
LRCH3-217ENST00000483442 TP73-AS1Q9UF72 201 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 C22orf24Q9Y442 160 aa1.94□□□□□ -2.1
LRCH3-217ENST00000483442 G3V3Q6 166 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 M0R143 59 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 TAX1BP3O14907 124 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 NDUFA1O15239 70 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 BCE1O60756 84 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 NCR2O95944 276 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 TRGC2P03986 189 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 SRP19P09132 144 aaKnown RBP1.93□□□□□ -2.1
LRCH3-217ENST00000483442 CXCL1P09341 107 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 TLX1NBP0CAT3 122 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 FABP2P12104 132 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 ATP6V0CP27449 155 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 RNASE13Q5GAN3 156 aaKnown RBP1.93□□□□□ -2.1
LRCH3-217ENST00000483442 LCA10Q71F78 164 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 CAMK2N1Q7Z7J9 78 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 LINC01551Q86U37 167 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 BAGE2Q86Y30 109 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 ORMDL3Q8N138 153 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 DAND5Q8N907 189 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 BRK1Q8WUW1 75 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 FAM104AQ969W3 186 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 PSMG3Q9BT73 122 aaPredicted RBP1.93□□□□□ -2.1
LRCH3-217ENST00000483442 NKX6-2Q9C056 277 aaPredicted RBP1.93□□□□□ -2.1
LRCH3-217ENST00000483442 CST9LQ9H4G1 147 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 SMDT1Q9H4I9 107 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 C6orf48Q9UBA6 75 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 UBE2D4Q9Y2X8 147 aa1.93□□□□□ -2.1
LRCH3-217ENST00000483442 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 SDHAF1A6NFY7 115 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 IGLC6P0CF74 106 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BOP23527 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BBP33778 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BDP58876 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BCP62807 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST2H2BEQ16778 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 FAM229BQ4G0N7 80 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 LUZP6Q538Z0 58 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.92□□□□□ -2.1
LRCH3-217ENST00000483442 Q5XG85 94 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 SPAG11AQ6PDA7 123 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 SLC25A34Q6PIV7 304 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 TEX261Q6UWH6 196 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 LYZL1Q6UWQ5 148 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 PP632Q6XCG6 107 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 COX6B2Q6YFQ2 88 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 C3orf22Q8N5N4 141 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 PPP1R1CQ8WVI7 109 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BHQ93079 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 RPL39LQ96EH5 51 aaKnown RBP1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BNQ99877 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 HIST1H2BMQ99879 126 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 C8orf17Q9NRJ1 99 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 CYTL1Q9NRR1 136 aa1.92□□□□□ -2.1
LRCH3-217ENST00000483442 SYNE2Q8WXH0 6885 aaKnown RBP1.92□□□□□ -2.1
LRCH3-217ENST00000483442 TMEM218A2RU14 115 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 A8MWL6 223 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 I3L3M4 83 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 LYRM1O43325 122 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 MPC2O95563 127 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 TRGC1P0CF51 173 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 LGALS3P17931 250 aaKnown RBP1.91□□□□□ -2.1
LRCH3-217ENST00000483442 FOXA3P55318 350 aaPredicted RBP1.91□□□□□ -2.1
LRCH3-217ENST00000483442 NDUFA6P56556 154 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 SERF2P84101 59 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 C2orf82Q6UX34 121 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 PRR15Q8IV56 129 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 XAGE1AQ9HD64 81 aa1.91□□□□□ -2.1
LRCH3-217ENST00000483442 FAM236AA0A1B0GUQ0 79 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 FAM236BA0A1B0GV22 79 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 A6NED7 52 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 ZNF727A8MUV8 499 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 F2Z2F3 143 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 TMEM256-PLSCR3K7ERE1 68 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 K7ERS5 55 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 M0R378 163 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 IL7P13232 177 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 GNG4P50150 75 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 MEIG1Q5JSS6 88 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 GTF2H5Q6ZYL4 71 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 SFT2D1Q8WV19 159 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
LRCH3-217ENST00000483442 TRBV30A0A0K0K1B3 111 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 CTXND1A0A1B0GTU2 59 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 C7orf77A4D0Y5 90 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 K7ERJ3 54 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 ST20Q9HBF5 79 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 NDUFA12Q9UI09 145 aa1.89□□□□□ -2.11
LRCH3-217ENST00000483442 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
LRCH3-217ENST00000483442 H3BMG7 143 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms