RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 RPL13AP40429 203 aaKnown RBP5.19□□□□□ -1.58
USP4-210ENST00000483212 COL5A1-AS1Q5SY13 56 aa5.19□□□□□ -1.58
USP4-210ENST00000483212 RAB37Q96AX2 223 aa5.19□□□□□ -1.58
USP4-210ENST00000483212 PLAC8Q9NZF1 115 aa5.19□□□□□ -1.58
USP4-210ENST00000483212 C22orf24Q9Y442 160 aa5.19□□□□□ -1.58
USP4-210ENST00000483212 A0A087WYN8 130 aa5.18□□□□□ -1.58
USP4-210ENST00000483212 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
USP4-210ENST00000483212 TRBV10-3A0A0K0K1G6 114 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 M0QXV9 152 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 LBHQ53QV2 105 aaPredicted RBP5.17□□□□□ -1.58
USP4-210ENST00000483212 LCE5AQ5TCM9 118 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
USP4-210ENST00000483212 KRTAP11-1Q8IUC1 163 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 NKAPP1Q8N9T2 125 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 TMEM126AQ9H061 195 aa5.17□□□□□ -1.58
USP4-210ENST00000483212 IGLV1-50A0A075B6I6 118 aa5.16□□□□□ -1.58
USP4-210ENST00000483212 GAGE10A6NGK3 116 aa5.16□□□□□ -1.58
USP4-210ENST00000483212 RPL28P46779 137 aaKnown RBP5.16□□□□□ -1.58
USP4-210ENST00000483212 PHF5AQ7RTV0 110 aaKnown RBP5.16□□□□□ -1.58
USP4-210ENST00000483212 SMIM11BQ8TCY0 68 aa5.16□□□□□ -1.58
USP4-210ENST00000483212 C9orf118A6NHY6 69 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 H7C2G1 150 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 S100A7L2Q5SY68 101 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 SCXQ7RTU7 201 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 CIRBP-AS1Q8TBR5 109 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
USP4-210ENST00000483212 KCNQ1DNQ9H478 68 aa5.15□□□□□ -1.59
USP4-210ENST00000483212 TRAV23DV6A0A075B6W5 121 aa5.14□□□□□ -1.59
USP4-210ENST00000483212 RPL37AP8A6NKH3 93 aa5.14□□□□□ -1.59
USP4-210ENST00000483212 TRIAP1O43715 76 aa5.14□□□□□ -1.59
USP4-210ENST00000483212 SPRR1AP35321 89 aa5.14□□□□□ -1.59
USP4-210ENST00000483212 BIRC6Q9NR09 4857 aa5.14□□□□□ -1.59
USP4-210ENST00000483212 KRTAP4-16G5E9R7 235 aaPredicted RBP5.13□□□□□ -1.59
USP4-210ENST00000483212 H3BUT2 72 aa5.13□□□□□ -1.59
USP4-210ENST00000483212 PRYO14603 147 aa5.13□□□□□ -1.59
USP4-210ENST00000483212 Q1RN00 199 aa5.13□□□□□ -1.59
USP4-210ENST00000483212 KIAA1109Q2LD37 5005 aa5.13□□□□□ -1.59
USP4-210ENST00000483212 A0A1W2PPM0 123 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
USP4-210ENST00000483212 XGP55808 180 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 HAMPP81172 84 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 C6orf99Q4VX62 202 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 DPH3Q96FX2 82 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 FAT1Q14517 4588 aa5.12□□□□□ -1.59
USP4-210ENST00000483212 DIRC1Q969H9 104 aa5.11□□□□□ -1.59
USP4-210ENST00000483212 PSMB2P49721 201 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 ELOF1P60002 83 aaKnown RBP5.1□□□□□ -1.59
USP4-210ENST00000483212 UBE2BP63146 152 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 REG3GQ6UW15 175 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 CBY1Q9Y3M2 126 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 HSPG2P98160 4391 aa5.1□□□□□ -1.59
USP4-210ENST00000483212 TRBV7-6A0A0J9YX20 115 aa5.09□□□□□ -1.59
USP4-210ENST00000483212 B5MCH6 92 aa5.09□□□□□ -1.59
USP4-210ENST00000483212 A0A1B0GV90 55 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 H0YGX0 51 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 TCL1BO95988 128 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 FABP2P12104 132 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 COX7BP24311 80 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 KRTAP13-1Q8IUC0 172 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 CLEC2BQ92478 149 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
USP4-210ENST00000483212 K7EP34 96 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 LST1O00453 97 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 BCE1O60756 84 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 COX6CP09669 75 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 LINC00575Q6W349 94 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 Q6ZRX8 168 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
USP4-210ENST00000483212 ETDCA0A1B0GVM5 59 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 H0Y9J4 135 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 SCGB1C2P0DMR2 95 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 VAMP3Q15836 100 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 LYRM7Q5U5X0 104 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 SMCR5Q8TEV8 140 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 Q9BRP9 147 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 SPCS1Q9Y6A9 102 aa5.06□□□□□ -1.6
USP4-210ENST00000483212 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
USP4-210ENST00000483212 A0A1B0GX51 115 aa5.05□□□□□ -1.6
USP4-210ENST00000483212 PRLHP81277 87 aa5.05□□□□□ -1.6
USP4-210ENST00000483212 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
USP4-210ENST00000483212 HERC2O95714 4834 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 ERC2-IT1O76042 136 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 TRACP01848 142 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 INAFM2P0DMQ5 153 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 KRTAP10-4P60372 401 aaPredicted RBP5.04□□□□□ -1.6
USP4-210ENST00000483212 ATXN8Q156A1 80 aa5.04□□□□□ -1.6
USP4-210ENST00000483212 hADV29S1A0JD25 119 aa5.03□□□□□ -1.6
USP4-210ENST00000483212 H3BMG7 143 aa5.03□□□□□ -1.6
USP4-210ENST00000483212 IGLV7-43P04211 117 aa5.03□□□□□ -1.6
USP4-210ENST00000483212 C1orf137Q5JT78 98 aa5.03□□□□□ -1.6
USP4-210ENST00000483212 UBE2AP49459 152 aa5.02□□□□□ -1.61
USP4-210ENST00000483212 DHRS4-AS1Q9P1J3 65 aa5.02□□□□□ -1.61
USP4-210ENST00000483212 PRO0461Q9UI25 63 aa5.02□□□□□ -1.61
USP4-210ENST00000483212 ZNF861PO60384 105 aa5.01□□□□□ -1.61
USP4-210ENST00000483212 SMR3BP02814 79 aaPredicted RBP5.01□□□□□ -1.61
USP4-210ENST00000483212 LINC01547P58512 204 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms