RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
C9orf3-218ENST00000482056 DHRS4-AS1Q9P1J3 65 aa10.03□□□□□ -0.8
C9orf3-218ENST00000482056 DPH3Q96FX2 82 aa10.01□□□□□ -0.81
C9orf3-218ENST00000482056 PRYO14603 147 aa10.01□□□□□ -0.81
C9orf3-218ENST00000482056 IGLV5-37A0A075B6J1 123 aa10□□□□□ -0.81
C9orf3-218ENST00000482056 SCXQ7RTU7 201 aa10□□□□□ -0.81
C9orf3-218ENST00000482056 LINC00588Q9Y4M8 146 aa9.99□□□□□ -0.81
C9orf3-218ENST00000482056 NREPQ16612 68 aa9.99□□□□□ -0.81
C9orf3-218ENST00000482056 DEFB105AQ8NG35 78 aa9.99□□□□□ -0.81
C9orf3-218ENST00000482056 ETDCA0A1B0GVM5 59 aa9.98□□□□□ -0.81
C9orf3-218ENST00000482056 Q6ZRX8 168 aa9.97□□□□□ -0.81
C9orf3-218ENST00000482056 Q8N377 158 aa9.97□□□□□ -0.81
C9orf3-218ENST00000482056 IGLV1-50A0A075B6I6 118 aa9.96□□□□□ -0.81
C9orf3-218ENST00000482056 PKD1L1Q8TDX9 2849 aa9.96□□□□□ -0.82
C9orf3-218ENST00000482056 TENM3Q9P273 2699 aa9.96□□□□□ -0.82
C9orf3-218ENST00000482056 IGLV5-48A0A075B6I7 105 aa9.95□□□□□ -0.82
C9orf3-218ENST00000482056 A0A1B0GW54 56 aa9.95□□□□□ -0.82
C9orf3-218ENST00000482056 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
C9orf3-218ENST00000482056 FUSP35637 526 aaKnown RBP eCLIP9.95□□□□□ -0.82
C9orf3-218ENST00000482056 F8P00451 2351 aa9.95□□□□□ -0.82
C9orf3-218ENST00000482056 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
C9orf3-218ENST00000482056 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
C9orf3-218ENST00000482056 SPRR1AP35321 89 aa9.93□□□□□ -0.82
C9orf3-218ENST00000482056 FAM236DA0A1B0GTK5 79 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 KRTAP4-16G5E9R7 235 aaPredicted RBP9.92□□□□□ -0.82
C9orf3-218ENST00000482056 BPY2O14599 106 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 FAM236CP0DP71 79 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 FAM168BA1KXE4 195 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 TM2D3Q9BRN9 247 aa9.92□□□□□ -0.82
C9orf3-218ENST00000482056 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
C9orf3-218ENST00000482056 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
C9orf3-218ENST00000482056 Q9BRP9 147 aa9.91□□□□□ -0.82
C9orf3-218ENST00000482056 CMYA5Q8N3K9 4069 aa9.9□□□□□ -0.82
C9orf3-218ENST00000482056 NDUFC1O43677 76 aa9.9□□□□□ -0.83
C9orf3-218ENST00000482056 IGKV4-1P06312 121 aa9.9□□□□□ -0.83
C9orf3-218ENST00000482056 H7BZZ5 65 aa9.89□□□□□ -0.83
C9orf3-218ENST00000482056 ANK2Q01484 3957 aa9.88□□□□□ -0.83
C9orf3-218ENST00000482056 C1orf137Q5JT78 98 aa9.88□□□□□ -0.83
C9orf3-218ENST00000482056 DNAH3Q8TD57 4116 aa9.88□□□□□ -0.83
C9orf3-218ENST00000482056 STAB1Q9NY15 2570 aa9.87□□□□□ -0.83
C9orf3-218ENST00000482056 ERC2-IT1O76042 136 aa9.87□□□□□ -0.83
C9orf3-218ENST00000482056 UBE2BP63146 152 aa9.87□□□□□ -0.83
C9orf3-218ENST00000482056 SNURFQ9Y675 71 aa9.87□□□□□ -0.83
C9orf3-218ENST00000482056 Q8N9L7 120 aa9.86□□□□□ -0.83
C9orf3-218ENST00000482056 REG3GQ6UW15 175 aa9.86□□□□□ -0.83
C9orf3-218ENST00000482056 TNP2Q05952 138 aa9.85□□□□□ -0.83
C9orf3-218ENST00000482056 KRTAP7-1Q8IUC3 87 aa9.85□□□□□ -0.83
C9orf3-218ENST00000482056 PRB2P02812 416 aaPredicted RBP9.84□□□□□ -0.83
C9orf3-218ENST00000482056 ST20-AS1Q8NBB2 130 aa9.84□□□□□ -0.83
C9orf3-218ENST00000482056 Q8NBF4 154 aa9.84□□□□□ -0.83
C9orf3-218ENST00000482056 SERP1Q9Y6X1 66 aa9.84□□□□□ -0.83
C9orf3-218ENST00000482056 FLNBO75369 2602 aaKnown RBP9.84□□□□□ -0.83
C9orf3-218ENST00000482056 A0A1W2PNM2 257 aa9.84□□□□□ -0.83
C9orf3-218ENST00000482056 F8WEM9 126 aa9.83□□□□□ -0.84
C9orf3-218ENST00000482056 K7EIL1 84 aa9.83□□□□□ -0.84
C9orf3-218ENST00000482056 OXTP01178 125 aa9.83□□□□□ -0.84
C9orf3-218ENST00000482056 MAST4O15021 2626 aa9.82□□□□□ -0.84
C9orf3-218ENST00000482056 TMEM254Q8TBM7 123 aa9.82□□□□□ -0.84
C9orf3-218ENST00000482056 BAHCC1Q9P281 2608 aa9.81□□□□□ -0.84
C9orf3-218ENST00000482056 ATP5EP56381 51 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-218ENST00000482056 SPRR4Q96PI1 79 aa9.81□□□□□ -0.84
C9orf3-218ENST00000482056 FBN1P35555 2871 aaKnown RBP9.8□□□□□ -0.84
C9orf3-218ENST00000482056 DNAH1Q9P2D7 4330 aa9.79□□□□□ -0.84
C9orf3-218ENST00000482056 OCR1Q9BZK8 76 aa9.79□□□□□ -0.84
C9orf3-218ENST00000482056 NOTCH1P46531 2555 aa9.78□□□□□ -0.84
C9orf3-218ENST00000482056 C16orf90A8MZG2 172 aa9.78□□□□□ -0.84
C9orf3-218ENST00000482056 PSCAO43653 123 aa9.78□□□□□ -0.84
C9orf3-218ENST00000482056 CNBPP62633 177 aaKnown RBP9.77□□□□□ -0.85
C9orf3-218ENST00000482056 C5orf47Q569G3 176 aa9.77□□□□□ -0.85
C9orf3-218ENST00000482056 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
C9orf3-218ENST00000482056 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
C9orf3-218ENST00000482056 A0A096LNI7 61 aa9.75□□□□□ -0.85
C9orf3-218ENST00000482056 UBE2DNLQ8IWF7 75 aa9.75□□□□□ -0.85
C9orf3-218ENST00000482056 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
C9orf3-218ENST00000482056 LINC00476Q8WZB0 136 aa9.74□□□□□ -0.85
C9orf3-218ENST00000482056 SMIM29Q86T20 159 aa9.74□□□□□ -0.85
C9orf3-218ENST00000482056 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
C9orf3-218ENST00000482056 A0A0U1RQV1 116 aa9.73□□□□□ -0.85
C9orf3-218ENST00000482056 Q5XG85 94 aa9.72□□□□□ -0.85
C9orf3-218ENST00000482056 KRTAP1-5Q9BYS1 174 aa9.7□□□□□ -0.86
C9orf3-218ENST00000482056 PKIGQ9Y2B9 76 aa9.7□□□□□ -0.86
C9orf3-218ENST00000482056 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
C9orf3-218ENST00000482056 PRLHP81277 87 aa9.7□□□□□ -0.86
C9orf3-218ENST00000482056 DSCR10P59022 87 aa9.69□□□□□ -0.86
C9orf3-218ENST00000482056 IGFL1Q6UW32 110 aa9.69□□□□□ -0.86
C9orf3-218ENST00000482056 HIGD2AQ9BW72 106 aa9.69□□□□□ -0.86
C9orf3-218ENST00000482056 FAM30AQ9NZY2 134 aa9.69□□□□□ -0.86
C9orf3-218ENST00000482056 IGLV8-61A0A075B6I0 122 aa9.68□□□□□ -0.86
C9orf3-218ENST00000482056 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
C9orf3-218ENST00000482056 SMIM26A0A096LP01 95 aa9.68□□□□□ -0.86
C9orf3-218ENST00000482056 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
C9orf3-218ENST00000482056 K7EQZ3 153 aa9.66□□□□□ -0.86
C9orf3-218ENST00000482056 UBE2AP49459 152 aa9.66□□□□□ -0.86
C9orf3-218ENST00000482056 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.66□□□□□ -0.86
C9orf3-218ENST00000482056 APLNQ9ULZ1 77 aa9.66□□□□□ -0.86
C9orf3-218ENST00000482056 COL6A5A8TX70 2615 aa9.65□□□□□ -0.87
C9orf3-218ENST00000482056 LCE6AA0A183 80 aa9.64□□□□□ -0.87
C9orf3-218ENST00000482056 HCG22E2RYF7 251 aa9.64□□□□□ -0.87
C9orf3-218ENST00000482056 H0Y9J4 135 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms