RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 TIMM17BO60830 172 aa9.93□□□□□ -0.82
RXRB-203ENST00000481441 LINC00158P58513 81 aa9.93□□□□□ -0.82
RXRB-203ENST00000481441 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
RXRB-203ENST00000481441 LINC00587B1AMM8 73 aa9.92□□□□□ -0.82
RXRB-203ENST00000481441 HIGD1BQ9P298 99 aa9.92□□□□□ -0.82
RXRB-203ENST00000481441 TMEM238C9JI98 176 aa9.91□□□□□ -0.82
RXRB-203ENST00000481441 COX17Q14061 63 aa9.91□□□□□ -0.82
RXRB-203ENST00000481441 DAND5Q8N907 189 aa9.91□□□□□ -0.82
RXRB-203ENST00000481441 KRTAP4-1Q9BYQ7 146 aa9.91□□□□□ -0.82
RXRB-203ENST00000481441 UBE2AP49459 152 aa9.9□□□□□ -0.82
RXRB-203ENST00000481441 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
RXRB-203ENST00000481441 MIR7-3HGQ8N6C7 128 aa9.9□□□□□ -0.82
RXRB-203ENST00000481441 GAGE10A6NGK3 116 aa9.89□□□□□ -0.83
RXRB-203ENST00000481441 SPANXDQ9BXN6 97 aa9.89□□□□□ -0.83
RXRB-203ENST00000481441 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
RXRB-203ENST00000481441 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
RXRB-203ENST00000481441 NPC2P61916 151 aa9.87□□□□□ -0.83
RXRB-203ENST00000481441 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
RXRB-203ENST00000481441 DDTP30046 118 aa9.86□□□□□ -0.83
RXRB-203ENST00000481441 HIST1H4GQ99525 98 aa9.86□□□□□ -0.83
RXRB-203ENST00000481441 SND1-IT1Q9HBX3 110 aa9.86□□□□□ -0.83
RXRB-203ENST00000481441 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
RXRB-203ENST00000481441 KRTAP13-3Q3SY46 172 aa9.85□□□□□ -0.83
RXRB-203ENST00000481441 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
RXRB-203ENST00000481441 FP248Q71RG6 208 aaPredicted RBP9.85□□□□□ -0.83
RXRB-203ENST00000481441 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
RXRB-203ENST00000481441 Q6ZVH6 145 aa9.84□□□□□ -0.83
RXRB-203ENST00000481441 LINC00337Q8N6G1 96 aa9.84□□□□□ -0.83
RXRB-203ENST00000481441 LINC00308Q8TCZ7 52 aa9.84□□□□□ -0.83
RXRB-203ENST00000481441 HSD52Q0P140 79 aa9.83□□□□□ -0.84
RXRB-203ENST00000481441 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
RXRB-203ENST00000481441 C3orf22Q8N5N4 141 aa9.83□□□□□ -0.84
RXRB-203ENST00000481441 IFITM1P13164 125 aa9.82□□□□□ -0.84
RXRB-203ENST00000481441 PRLHP81277 87 aa9.82□□□□□ -0.84
RXRB-203ENST00000481441 TAL2Q16559 108 aa9.82□□□□□ -0.84
RXRB-203ENST00000481441 IGKV2-28A0A075B6P5 120 aa9.81□□□□□ -0.84
RXRB-203ENST00000481441 IGKV2D-28P01615 120 aa9.81□□□□□ -0.84
RXRB-203ENST00000481441 SPAG11AQ6PDA7 123 aa9.81□□□□□ -0.84
RXRB-203ENST00000481441 CEND1Q8N111 149 aa9.81□□□□□ -0.84
RXRB-203ENST00000481441 NKAPP1Q8N9T2 125 aa9.81□□□□□ -0.84
RXRB-203ENST00000481441 LOC107984156A0A0G2JMH3 177 aa9.8□□□□□ -0.84
RXRB-203ENST00000481441 ARL17AQ8IVW1 177 aa9.8□□□□□ -0.84
RXRB-203ENST00000481441 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
RXRB-203ENST00000481441 SEC61BP60468 96 aaKnown RBP9.79□□□□□ -0.84
RXRB-203ENST00000481441 Q8NDZ9 215 aa9.79□□□□□ -0.84
RXRB-203ENST00000481441 HINT1P49773 126 aaPredicted RBP9.78□□□□□ -0.84
RXRB-203ENST00000481441 FXYD2P54710 66 aa9.78□□□□□ -0.84
RXRB-203ENST00000481441 LCE2CQ5TA81 110 aa9.78□□□□□ -0.84
RXRB-203ENST00000481441 A4D1N5 150 aa9.77□□□□□ -0.85
RXRB-203ENST00000481441 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
RXRB-203ENST00000481441 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
RXRB-203ENST00000481441 BVES-AS1Q5T3Y7 98 aa9.76□□□□□ -0.85
RXRB-203ENST00000481441 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
RXRB-203ENST00000481441 M0R143 59 aa9.74□□□□□ -0.85
RXRB-203ENST00000481441 NDUFC2O95298 119 aa9.74□□□□□ -0.85
RXRB-203ENST00000481441 VPREB1P12018 145 aa9.74□□□□□ -0.85
RXRB-203ENST00000481441 TMEM238LA0A1B0GVL6 79 aa9.73□□□□□ -0.85
RXRB-203ENST00000481441 A6NJY4 79 aa9.73□□□□□ -0.85
RXRB-203ENST00000481441 M0R378 163 aa9.72□□□□□ -0.85
RXRB-203ENST00000481441 NCR3O14931 201 aa9.72□□□□□ -0.85
RXRB-203ENST00000481441 BATFQ16520 125 aa9.72□□□□□ -0.85
RXRB-203ENST00000481441 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
RXRB-203ENST00000481441 CFC1BP0CG36 223 aa9.71□□□□□ -0.86
RXRB-203ENST00000481441 CFC1P0CG37 223 aa9.71□□□□□ -0.86
RXRB-203ENST00000481441 NHP2Q9NX24 153 aaKnown RBP9.71□□□□□ -0.86
RXRB-203ENST00000481441 SPRR4Q96PI1 79 aa9.7□□□□□ -0.86
RXRB-203ENST00000481441 TRBV10-2A0A0K0K1G8 114 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 K7ERJ3 54 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 KRTAP19-2Q3LHN2 52 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 Q8NBF4 154 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 HIGD2AQ9BW72 106 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 SNHG12Q9BXW3 62 aa9.68□□□□□ -0.86
RXRB-203ENST00000481441 A0A0B4J2C4 111 aa9.67□□□□□ -0.86
RXRB-203ENST00000481441 A0A1B0GWB2 263 aa9.67□□□□□ -0.86
RXRB-203ENST00000481441 MT1HP80294 61 aa9.67□□□□□ -0.86
RXRB-203ENST00000481441 RAB37Q96AX2 223 aa9.67□□□□□ -0.86
RXRB-203ENST00000481441 A6NDN8 102 aa9.66□□□□□ -0.86
RXRB-203ENST00000481441 TRAV13-2A0A0B4J235 113 aa9.65□□□□□ -0.86
RXRB-203ENST00000481441 SPINK1P00995 79 aa9.65□□□□□ -0.86
RXRB-203ENST00000481441 XP32Q5T750 250 aa9.65□□□□□ -0.86
RXRB-203ENST00000481441 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.86
RXRB-203ENST00000481441 TRBV10-3A0A0K0K1G6 114 aa9.63□□□□□ -0.87
RXRB-203ENST00000481441 S100A7L2Q5SY68 101 aa9.63□□□□□ -0.87
RXRB-203ENST00000481441 PRO1854Q9UHT4 67 aa9.63□□□□□ -0.87
RXRB-203ENST00000481441 IGLV6-57P01721 117 aa9.62□□□□□ -0.87
RXRB-203ENST00000481441 H7C2G1 150 aa9.61□□□□□ -0.87
RXRB-203ENST00000481441 ZNF706Q9Y5V0 76 aaPredicted RBP9.61□□□□□ -0.87
RXRB-203ENST00000481441 LORP23490 312 aaPredicted RBP9.6□□□□□ -0.87
RXRB-203ENST00000481441 Q8N377 158 aa9.58□□□□□ -0.88
RXRB-203ENST00000481441 Q1RN00 199 aa9.57□□□□□ -0.88
RXRB-203ENST00000481441 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
RXRB-203ENST00000481441 SMIM11BQ8TCY0 68 aa9.57□□□□□ -0.88
RXRB-203ENST00000481441 TRAV23DV6A0A075B6W5 121 aa9.56□□□□□ -0.88
RXRB-203ENST00000481441 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
RXRB-203ENST00000481441 TAX1BP3O14907 124 aa9.56□□□□□ -0.88
RXRB-203ENST00000481441 KRTAP10-6P60371 365 aaPredicted RBP9.56□□□□□ -0.88
RXRB-203ENST00000481441 KCNQ1DNQ9H478 68 aa9.56□□□□□ -0.88
RXRB-203ENST00000481441 PRYO14603 147 aa9.55□□□□□ -0.88
RXRB-203ENST00000481441 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
RXRB-203ENST00000481441 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms