RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
USP39-215ENST00000481409 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
USP39-215ENST00000481409 PANO1I0J062 215 aa6.39□□□□□ -1.39
USP39-215ENST00000481409 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP39-215ENST00000481409 PSMB2P49721 201 aa6.39□□□□□ -1.39
USP39-215ENST00000481409 DIRC1Q969H9 104 aa6.39□□□□□ -1.39
USP39-215ENST00000481409 TRBV20-1A0A075B6N2 111 aa6.38□□□□□ -1.39
USP39-215ENST00000481409 H7C2G1 150 aa6.38□□□□□ -1.39
USP39-215ENST00000481409 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
USP39-215ENST00000481409 SNCGO76070 127 aa6.38□□□□□ -1.39
USP39-215ENST00000481409 SPRR1AP35321 89 aa6.38□□□□□ -1.39
USP39-215ENST00000481409 UBE2BP63146 152 aa6.38□□□□□ -1.39
USP39-215ENST00000481409 A0A1B0GX51 115 aa6.37□□□□□ -1.39
USP39-215ENST00000481409 H3BUT2 72 aa6.37□□□□□ -1.39
USP39-215ENST00000481409 FABP2P12104 132 aa6.37□□□□□ -1.39
USP39-215ENST00000481409 REG3GQ6UW15 175 aa6.37□□□□□ -1.39
USP39-215ENST00000481409 PHF5AQ7RTV0 110 aaKnown RBP6.37□□□□□ -1.39
USP39-215ENST00000481409 CIRBP-AS1Q8TBR5 109 aa6.37□□□□□ -1.39
USP39-215ENST00000481409 HECTD4Q9Y4D8 3996 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 A0A1W2PPM0 123 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 H0Y9J4 135 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 TRIAP1O43715 76 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 C6orf99Q4VX62 202 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 FAM30AQ9NZY2 134 aa6.36□□□□□ -1.39
USP39-215ENST00000481409 DNAH11Q96DT5 4516 aa6.35□□□□□ -1.39
USP39-215ENST00000481409 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
USP39-215ENST00000481409 ELOF1P60002 83 aaKnown RBP6.35□□□□□ -1.39
USP39-215ENST00000481409 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
USP39-215ENST00000481409 SCXQ7RTU7 201 aa6.35□□□□□ -1.39
USP39-215ENST00000481409 PKD1P98161 4303 aa6.35□□□□□ -1.39
USP39-215ENST00000481409 ETDCA0A1B0GVM5 59 aa6.34□□□□□ -1.39
USP39-215ENST00000481409 KRTAP4-16G5E9R7 235 aaPredicted RBP6.34□□□□□ -1.39
USP39-215ENST00000481409 SLC25A20O43772 301 aa6.34□□□□□ -1.39
USP39-215ENST00000481409 COX7BP24311 80 aa6.34□□□□□ -1.39
USP39-215ENST00000481409 BCE1O60756 84 aa6.33□□□□□ -1.4
USP39-215ENST00000481409 GTF2H5Q6ZYL4 71 aa6.33□□□□□ -1.4
USP39-215ENST00000481409 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
USP39-215ENST00000481409 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
USP39-215ENST00000481409 H3BQ85 93 aa6.32□□□□□ -1.4
USP39-215ENST00000481409 CDK2AP2O75956 126 aa6.32□□□□□ -1.4
USP39-215ENST00000481409 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
USP39-215ENST00000481409 Q6ZRX8 168 aa6.32□□□□□ -1.4
USP39-215ENST00000481409 DNAH5Q8TE73 4624 aa6.31□□□□□ -1.4
USP39-215ENST00000481409 B5MCH6 92 aa6.31□□□□□ -1.4
USP39-215ENST00000481409 TRACP01848 142 aa6.31□□□□□ -1.4
USP39-215ENST00000481409 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
USP39-215ENST00000481409 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
USP39-215ENST00000481409 LST1O00453 97 aa6.3□□□□□ -1.4
USP39-215ENST00000481409 XGP55808 180 aa6.3□□□□□ -1.4
USP39-215ENST00000481409 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
USP39-215ENST00000481409 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
USP39-215ENST00000481409 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
USP39-215ENST00000481409 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
USP39-215ENST00000481409 DNAL4O96015 105 aa6.29□□□□□ -1.4
USP39-215ENST00000481409 FAM19A1Q7Z5A9 133 aa6.29□□□□□ -1.4
USP39-215ENST00000481409 NAA38Q9BRA0 125 aaKnown RBP6.29□□□□□ -1.4
USP39-215ENST00000481409 RYR3Q15413 4870 aa6.28□□□□□ -1.4
USP39-215ENST00000481409 K7EP34 96 aa6.28□□□□□ -1.4
USP39-215ENST00000481409 TCL1BO95988 128 aa6.28□□□□□ -1.4
USP39-215ENST00000481409 UBE2AP49459 152 aa6.28□□□□□ -1.4
USP39-215ENST00000481409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.28□□□□□ -1.4
USP39-215ENST00000481409 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 C1orf137Q5JT78 98 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 KRTAP13-1Q8IUC0 172 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 CLEC2BQ92478 149 aa6.27□□□□□ -1.41
USP39-215ENST00000481409 ZNF861PO60384 105 aa6.26□□□□□ -1.41
USP39-215ENST00000481409 IGLV7-43P04211 117 aa6.26□□□□□ -1.41
USP39-215ENST00000481409 FAM218AQ96MZ4 157 aa6.25□□□□□ -1.41
USP39-215ENST00000481409 Q9BRP9 147 aa6.25□□□□□ -1.41
USP39-215ENST00000481409 A0A1B0GV90 55 aa6.24□□□□□ -1.41
USP39-215ENST00000481409 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
USP39-215ENST00000481409 SMCR5Q8TEV8 140 aa6.24□□□□□ -1.41
USP39-215ENST00000481409 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
USP39-215ENST00000481409 ORMDL1Q9P0S3 153 aa6.24□□□□□ -1.41
USP39-215ENST00000481409 ZNF706Q9Y5V0 76 aaPredicted RBP6.24□□□□□ -1.41
USP39-215ENST00000481409 F8W1H4 67 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 H3BMG7 143 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 H3BT86 120 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
USP39-215ENST00000481409 PRLHP81277 87 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
USP39-215ENST00000481409 PKHD1P08F94 4074 aa6.22□□□□□ -1.41
USP39-215ENST00000481409 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
USP39-215ENST00000481409 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
USP39-215ENST00000481409 Q6ZQY7 126 aa6.22□□□□□ -1.41
USP39-215ENST00000481409 HIGD2AQ9BW72 106 aa6.22□□□□□ -1.41
USP39-215ENST00000481409 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
USP39-215ENST00000481409 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.42
USP39-215ENST00000481409 C9JAW5 83 aa6.21□□□□□ -1.42
USP39-215ENST00000481409 TEX49A0A1B0GTD5 131 aa6.2□□□□□ -1.42
USP39-215ENST00000481409 HAMPP81172 84 aa6.2□□□□□ -1.42
USP39-215ENST00000481409 SPINK6Q6UWN8 80 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms