RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TRGV1A0A0A0MS02 117 aa6.67□□□□□ -1.34
PRPF4B-206ENST00000481109 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
PRPF4B-206ENST00000481109 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
PRPF4B-206ENST00000481109 CSPG4Q6UVK1 2322 aa6.66□□□□□ -1.34
PRPF4B-206ENST00000481109 SPATA8Q6RVD6 105 aa6.65□□□□□ -1.34
PRPF4B-206ENST00000481109 BRD3OSQ6XYD6 125 aa6.65□□□□□ -1.34
PRPF4B-206ENST00000481109 FLNCQ14315 2725 aa6.65□□□□□ -1.35
PRPF4B-206ENST00000481109 TNP2Q05952 138 aa6.64□□□□□ -1.35
PRPF4B-206ENST00000481109 CFAP46Q8IYW2 2715 aa6.64□□□□□ -1.35
PRPF4B-206ENST00000481109 IGLV5-37A0A075B6J1 123 aa6.64□□□□□ -1.35
PRPF4B-206ENST00000481109 GVQW2A0A096LPI5 108 aaPredicted RBP6.63□□□□□ -1.35
PRPF4B-206ENST00000481109 Q8N377 158 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 ZANQ9Y493 2812 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 CR1P17927 2039 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 DEFB131AP59861 70 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 LY6EQ16553 131 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
PRPF4B-206ENST00000481109 WFDC13Q8IUB5 93 aa6.61□□□□□ -1.35
PRPF4B-206ENST00000481109 CENPEQ02224 2701 aa6.61□□□□□ -1.35
PRPF4B-206ENST00000481109 CUBNO60494 3623 aa6.6□□□□□ -1.35
PRPF4B-206ENST00000481109 USP9YO00507 2555 aaPredicted RBP6.59□□□□□ -1.35
PRPF4B-206ENST00000481109 WNK1Q9H4A3 2382 aa6.59□□□□□ -1.35
PRPF4B-206ENST00000481109 HRES1P13985 223 aa6.59□□□□□ -1.35
PRPF4B-206ENST00000481109 PKD1L2Q7Z442 2459 aa6.58□□□□□ -1.36
PRPF4B-206ENST00000481109 USP9XQ93008 2570 aaPredicted RBP6.58□□□□□ -1.36
PRPF4B-206ENST00000481109 POLQO75417 2590 aa6.58□□□□□ -1.36
PRPF4B-206ENST00000481109 WFDC10BQ8IUB3 73 aa6.58□□□□□ -1.36
PRPF4B-206ENST00000481109 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 PIEZO1Q92508 2521 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 CREBBPQ92793 2442 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 A6NDX4 124 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 H3BUX3 64 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 DEFB116Q30KQ4 102 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 REG3GQ6UW15 175 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 UNQ6190/PRO20217Q6UXQ8 127 aa6.57□□□□□ -1.36
PRPF4B-206ENST00000481109 C7orf33Q8WU49 177 aa6.56□□□□□ -1.36
PRPF4B-206ENST00000481109 CHCHD10Q8WYQ3 142 aaPredicted RBP6.56□□□□□ -1.36
PRPF4B-206ENST00000481109 XAGE1AQ9HD64 81 aa6.56□□□□□ -1.36
PRPF4B-206ENST00000481109 MXRA5Q9NR99 2828 aa6.56□□□□□ -1.36
PRPF4B-206ENST00000481109 C10orf99Q6UWK7 81 aa6.54□□□□□ -1.36
PRPF4B-206ENST00000481109 MYO18BQ8IUG5 2567 aa6.54□□□□□ -1.36
PRPF4B-206ENST00000481109 MAP6D1Q9H9H5 199 aa6.54□□□□□ -1.36
PRPF4B-206ENST00000481109 IGSF10Q6WRI0 2623 aa6.53□□□□□ -1.36
PRPF4B-206ENST00000481109 CYSRT1A8MQ03 144 aa6.53□□□□□ -1.36
PRPF4B-206ENST00000481109 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
PRPF4B-206ENST00000481109 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
PRPF4B-206ENST00000481109 CACNA1AO00555 2505 aa6.52□□□□□ -1.37
PRPF4B-206ENST00000481109 DEFB105AQ8NG35 78 aa6.51□□□□□ -1.37
PRPF4B-206ENST00000481109 CCL19Q99731 98 aa6.51□□□□□ -1.37
PRPF4B-206ENST00000481109 FBN2P35556 2912 aa6.51□□□□□ -1.37
PRPF4B-206ENST00000481109 ZFYVE26Q68DK2 2539 aa6.51□□□□□ -1.37
PRPF4B-206ENST00000481109 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
PRPF4B-206ENST00000481109 DOPEY1Q5JWR5 2465 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 ACACBO00763 2458 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 FAM208BQ5VWN6 2430 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 ZNF861PO60384 105 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 REG3AQ06141 175 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 CLPSL2Q6UWE3 100 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 C16orf74Q96GX8 76 aa6.5□□□□□ -1.37
PRPF4B-206ENST00000481109 TEX15Q9BXT5 2789 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 A8MWP4 228 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 MAPK1IP1LQ8NDC0 245 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 TP53AIP1Q9HCN2 124 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 MSMBP08118 114 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
PRPF4B-206ENST00000481109 ANKRD17O75179 2603 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-206ENST00000481109 ZNF469Q96JG9 3925 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-206ENST00000481109 UQCR11O14957 56 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 ABCA12Q86UK0 2595 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 MYO9AB2RTY4 2548 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 LRRK2Q5S007 2527 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 TLN2Q9Y4G6 2542 aa6.47□□□□□ -1.37
PRPF4B-206ENST00000481109 PTPN13Q12923 2485 aa6.46□□□□□ -1.38
PRPF4B-206ENST00000481109 IGLV10-54A0A075B6I4 117 aa6.45□□□□□ -1.38
PRPF4B-206ENST00000481109 P0C880 135 aa6.45□□□□□ -1.38
PRPF4B-206ENST00000481109 NF1P21359 2839 aa6.45□□□□□ -1.38
PRPF4B-206ENST00000481109 PRR34Q9NV39 138 aa6.45□□□□□ -1.38
PRPF4B-206ENST00000481109 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
PRPF4B-206ENST00000481109 AKAP9Q99996 3911 aa6.44□□□□□ -1.38
PRPF4B-206ENST00000481109 NIPBLQ6KC79 2804 aaeCLIP6.44□□□□□ -1.383e-13■□□□□ 9
PRPF4B-206ENST00000481109 A0A1B0GU69 56 aa6.44□□□□□ -1.38
PRPF4B-206ENST00000481109 Q6ZRX8 168 aa6.44□□□□□ -1.38
PRPF4B-206ENST00000481109 CSNK1G2-AS1Q8NCQ2 148 aa6.44□□□□□ -1.38
PRPF4B-206ENST00000481109 CHD6Q8TD26 2715 aa6.43□□□□□ -1.38
PRPF4B-206ENST00000481109 NOTCH3Q9UM47 2321 aa6.43□□□□□ -1.38
PRPF4B-206ENST00000481109 EGFEM1PQ0D2K5 195 aa6.43□□□□□ -1.38
PRPF4B-206ENST00000481109 ZNF462Q96JM2 2506 aa6.43□□□□□ -1.38
PRPF4B-206ENST00000481109 SETD2Q9BYW2 2564 aaPredicted RBP6.42□□□□□ -1.38
PRPF4B-206ENST00000481109 EPG5Q9HCE0 2579 aa6.42□□□□□ -1.38
PRPF4B-206ENST00000481109 SONP18583 2426 aaKnown RBP6.42□□□□□ -1.38
PRPF4B-206ENST00000481109 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
PRPF4B-206ENST00000481109 ANGP03950 147 aaKnown RBP6.41□□□□□ -1.38
PRPF4B-206ENST00000481109 DEFB136Q30KP8 78 aa6.41□□□□□ -1.38
PRPF4B-206ENST00000481109 NAV2Q8IVL1 2488 aa6.41□□□□□ -1.38
PRPF4B-206ENST00000481109 IGLV8-61A0A075B6I0 122 aa6.4□□□□□ -1.39
PRPF4B-206ENST00000481109 RPL37AP61513 92 aaKnown RBP6.4□□□□□ -1.39
PRPF4B-206ENST00000481109 KRTAP4-16G5E9R7 235 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms