RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 FLNBO75369 2602 aaKnown RBP-0.51□□□□□ -2.49
RGPD6-209ENST00000480894 PLGLAQ15195 96 aa-0.51□□□□□ -2.49
RGPD6-209ENST00000480894 KRTAP19-8Q3LI54 63 aa-0.51□□□□□ -2.49
RGPD6-209ENST00000480894 LELP1Q5T871 98 aa-0.51□□□□□ -2.49
RGPD6-209ENST00000480894 C9orf62Q8N4C0 152 aa-0.51□□□□□ -2.49
RGPD6-209ENST00000480894 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 REV3LO60673 3130 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 MAGI2Q86UL8 1455 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 A0A1B0GUT8 65 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 COX7BP24311 80 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 CREBBPQ92793 2442 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 NEBP20929 6669 aa-0.52□□□□□ -2.49
RGPD6-209ENST00000480894 AKAP9Q99996 3911 aa-0.53□□□□□ -2.49
RGPD6-209ENST00000480894 APOBP04114 4563 aaKnown RBP-0.53□□□□□ -2.49
RGPD6-209ENST00000480894 CEP162Q5TB80 1403 aa-0.53□□□□□ -2.49
RGPD6-209ENST00000480894 V9GYS6 101 aa-0.53□□□□□ -2.49
RGPD6-209ENST00000480894 RYR3Q15413 4870 aa-0.53□□□□□ -2.49
RGPD6-209ENST00000480894 KIAA1109Q2LD37 5005 aa-0.54□□□□□ -2.5
RGPD6-209ENST00000480894 NEXMIFQ5QGS0 1516 aa-0.54□□□□□ -2.5
RGPD6-209ENST00000480894 EPG5Q9HCE0 2579 aa-0.55□□□□□ -2.5
RGPD6-209ENST00000480894 WFDC13Q8IUB5 93 aa-0.55□□□□□ -2.5
RGPD6-209ENST00000480894 MXRA5Q9NR99 2828 aa-0.55□□□□□ -2.5
RGPD6-209ENST00000480894 PKD1L3Q7Z443 1732 aa-0.55□□□□□ -2.5
RGPD6-209ENST00000480894 SETD2Q9BYW2 2564 aaPredicted RBP-0.55□□□□□ -2.5
RGPD6-209ENST00000480894 UBR3Q6ZT12 1888 aa-0.56□□□□□ -2.5
RGPD6-209ENST00000480894 IQCF6A8MYZ5 107 aa-0.56□□□□□ -2.5
RGPD6-209ENST00000480894 ANK3Q12955 4377 aaKnown RBP-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 DNAH11Q96DT5 4516 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 LYSTQ99698 3801 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 PCNX1Q96RV3 2341 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 ATP7BP35670 1465 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 HTTP42858 3142 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 MYO3AQ8NEV4 1616 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 BCORQ6W2J9 1755 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 PLIN4Q96Q06 1357 aa-0.57□□□□□ -2.5
RGPD6-209ENST00000480894 DNAH2Q9P225 4427 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 CYB5AP00167 134 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 MT4P47944 62 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 ALKQ9UM73 1620 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 TACC2O95359 2948 aa-0.58□□□□□ -2.5
RGPD6-209ENST00000480894 PLECQ15149 4684 aaKnown RBP-0.59□□□□□ -2.5
RGPD6-209ENST00000480894 PVALEFA0A1B0GWK0 134 aa-0.59□□□□□ -2.5
RGPD6-209ENST00000480894 K7EP34 96 aa-0.59□□□□□ -2.5
RGPD6-209ENST00000480894 S100A16Q96FQ6 103 aaKnown RBP-0.59□□□□□ -2.5
RGPD6-209ENST00000480894 PRRC2CQ9Y520 2896 aaKnown RBP-0.59□□□□□ -2.5
RGPD6-209ENST00000480894 QSER1Q2KHR3 1735 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 USP9YO00507 2555 aaPredicted RBP-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 MYMXA0A1B0GTQ4 84 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 SPRR2EP22531 72 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 SNRPFP62306 86 aaKnown RBP-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 RPL38P63173 70 aaKnown RBP-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 COX6B2Q6YFQ2 88 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 HECTD1Q9ULT8 2610 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 RGPD2P0DJD1 1756 aa-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 SONP18583 2426 aaKnown RBP-0.6□□□□□ -2.51
RGPD6-209ENST00000480894 TNRC18O15417 2968 aaPredicted RBP-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 LRRC7Q96NW7 1537 aa-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 NBASA2RRP1 2371 aa-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 SACSQ9NZJ4 4579 aa-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 DNAH1Q9P2D7 4330 aa-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 UBR1Q8IWV7 1749 aa-0.61□□□□□ -2.51
RGPD6-209ENST00000480894 RGPD4Q7Z3J3 1758 aa-0.62□□□□□ -2.51
RGPD6-209ENST00000480894 SPRR2AP35326 72 aa-0.62□□□□□ -2.51
RGPD6-209ENST00000480894 ZZEF1O43149 2961 aa-0.62□□□□□ -2.51
RGPD6-209ENST00000480894 ITPR3Q14573 2671 aa-0.62□□□□□ -2.51
RGPD6-209ENST00000480894 AKAP13Q12802 2813 aa-0.63□□□□□ -2.51
RGPD6-209ENST00000480894 DOPEY1Q5JWR5 2465 aa-0.63□□□□□ -2.51
RGPD6-209ENST00000480894 LRRC9Q6ZRR7 1453 aa-0.63□□□□□ -2.51
RGPD6-209ENST00000480894 TTC37Q6PGP7 1564 aa-0.63□□□□□ -2.51
RGPD6-209ENST00000480894 CUBNO60494 3623 aa-0.63□□□□□ -2.51
RGPD6-209ENST00000480894 DNAH8Q96JB1 4490 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 FASNP49327 2511 aaKnown RBP-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 VPS13BQ7Z7G8 4022 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 KALRNO60229 2985 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 TRAV21A0A0B4J279 112 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 LINC00643Q86TS7 51 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 DMXL1Q9Y485 3027 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 DNHD1Q96M86 4753 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 LAMA1P25391 3075 aa-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 LAMA2P24043 3122 aaKnown RBP-0.64□□□□□ -2.51
RGPD6-209ENST00000480894 CMYA5Q8N3K9 4069 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 DYNC1H1Q14204 4646 aaKnown RBP-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 MYO18BQ8IUG5 2567 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 RABAC1Q9UI14 185 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 RGPD1P0DJD0 1748 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 KNL1Q8NG31 2342 aa-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 RGPD3A6NKT7 1758 aaPredicted RBP-0.65□□□□□ -2.51
RGPD6-209ENST00000480894 ABCC3O15438 1527 aa-0.66□□□□□ -2.52
RGPD6-209ENST00000480894 PREX1Q8TCU6 1659 aa-0.66□□□□□ -2.52
RGPD6-209ENST00000480894 LAMA3Q16787 3333 aa-0.66□□□□□ -2.52
RGPD6-209ENST00000480894 SPTBN4Q9H254 2564 aa-0.66□□□□□ -2.52
RGPD6-209ENST00000480894 HIVEP1P15822 2718 aa-0.66□□□□□ -2.52
RGPD6-209ENST00000480894 RGPD8O14715 1765 aaPredicted RBP-0.67□□□□□ -2.52
RGPD6-209ENST00000480894 RGPD5Q99666 1765 aa-0.67□□□□□ -2.52
RGPD6-209ENST00000480894 CEBPZOSA8MTT3 80 aa-0.67□□□□□ -2.52
RGPD6-209ENST00000480894 NDUFA3O95167 84 aa-0.67□□□□□ -2.52
RGPD6-209ENST00000480894 TRANK1O15050 2925 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms