RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.65
UPF3A-206ENST00000480362 DIRC1Q969H9 104 aa10.96□□□□□ -0.65
UPF3A-206ENST00000480362 A0A1W2PPM0 123 aa10.95□□□□□ -0.66
UPF3A-206ENST00000480362 COX6CP09669 75 aa10.95□□□□□ -0.66
UPF3A-206ENST00000480362 REG3GQ6UW15 175 aa10.95□□□□□ -0.66
UPF3A-206ENST00000480362 SPRR1AP35321 89 aa10.93□□□□□ -0.66
UPF3A-206ENST00000480362 VAMP3Q15836 100 aa10.93□□□□□ -0.66
UPF3A-206ENST00000480362 FABP2P12104 132 aa10.92□□□□□ -0.66
UPF3A-206ENST00000480362 TRBV7-6A0A0J9YX20 115 aa10.91□□□□□ -0.66
UPF3A-206ENST00000480362 H0YGX0 51 aa10.91□□□□□ -0.66
UPF3A-206ENST00000480362 COX7BP24311 80 aa10.91□□□□□ -0.66
UPF3A-206ENST00000480362 XGP55808 180 aa10.91□□□□□ -0.66
UPF3A-206ENST00000480362 ETDCA0A1B0GVM5 59 aa10.9□□□□□ -0.66
UPF3A-206ENST00000480362 KRTAP4-16G5E9R7 235 aaPredicted RBP10.9□□□□□ -0.66
UPF3A-206ENST00000480362 CLEC2BQ92478 149 aa10.9□□□□□ -0.66
UPF3A-206ENST00000480362 LYRM7Q5U5X0 104 aa10.89□□□□□ -0.67
UPF3A-206ENST00000480362 A0A1B0GV90 55 aa10.88□□□□□ -0.67
UPF3A-206ENST00000480362 B5MCH6 92 aa10.88□□□□□ -0.67
UPF3A-206ENST00000480362 ELOF1P60002 83 aaKnown RBP10.88□□□□□ -0.67
UPF3A-206ENST00000480362 PSORS1C2Q9UIG4 136 aa10.88□□□□□ -0.67
UPF3A-206ENST00000480362 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
UPF3A-206ENST00000480362 TCL1BO95988 128 aa10.87□□□□□ -0.67
UPF3A-206ENST00000480362 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
UPF3A-206ENST00000480362 FAM218AQ96MZ4 157 aa10.87□□□□□ -0.67
UPF3A-206ENST00000480362 BCE1O60756 84 aa10.86□□□□□ -0.67
UPF3A-206ENST00000480362 LINC00528Q8N1L1 170 aa10.86□□□□□ -0.67
UPF3A-206ENST00000480362 SPCS1Q9Y6A9 102 aa10.86□□□□□ -0.67
UPF3A-206ENST00000480362 PKHD1P08F94 4074 aa10.86□□□□□ -0.67
UPF3A-206ENST00000480362 LRP1BQ9NZR2 4599 aa10.85□□□□□ -0.67
UPF3A-206ENST00000480362 TRBV20-1A0A075B6N2 111 aa10.85□□□□□ -0.67
UPF3A-206ENST00000480362 LINC00575Q6W349 94 aa10.85□□□□□ -0.67
UPF3A-206ENST00000480362 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
UPF3A-206ENST00000480362 Q6ZRX8 168 aa10.84□□□□□ -0.67
UPF3A-206ENST00000480362 LST1O00453 97 aa10.83□□□□□ -0.68
UPF3A-206ENST00000480362 PRLHP81277 87 aa10.83□□□□□ -0.68
UPF3A-206ENST00000480362 ATXN8Q156A1 80 aa10.83□□□□□ -0.68
UPF3A-206ENST00000480362 K7EP34 96 aa10.82□□□□□ -0.68
UPF3A-206ENST00000480362 UBE2AP49459 152 aa10.82□□□□□ -0.68
UPF3A-206ENST00000480362 SLC25A20O43772 301 aa10.81□□□□□ -0.68
UPF3A-206ENST00000480362 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
UPF3A-206ENST00000480362 Q9BRP9 147 aa10.81□□□□□ -0.68
UPF3A-206ENST00000480362 A0A1B0GX51 115 aa10.8□□□□□ -0.68
UPF3A-206ENST00000480362 hADV29S1A0JD25 119 aa10.8□□□□□ -0.68
UPF3A-206ENST00000480362 H0Y9J4 135 aa10.8□□□□□ -0.68
UPF3A-206ENST00000480362 SMR3BP02814 79 aaPredicted RBP10.8□□□□□ -0.68
UPF3A-206ENST00000480362 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
UPF3A-206ENST00000480362 H3BMG7 143 aa10.79□□□□□ -0.68
UPF3A-206ENST00000480362 SNCGO76070 127 aa10.79□□□□□ -0.68
UPF3A-206ENST00000480362 GTF2H5Q6ZYL4 71 aa10.79□□□□□ -0.68
UPF3A-206ENST00000480362 TRACP01848 142 aa10.78□□□□□ -0.68
UPF3A-206ENST00000480362 KRTAP13-1Q8IUC0 172 aa10.78□□□□□ -0.68
UPF3A-206ENST00000480362 SMCR5Q8TEV8 140 aa10.78□□□□□ -0.68
UPF3A-206ENST00000480362 EPPK1P58107 5090 aaKnown RBP10.78□□□□□ -0.68
UPF3A-206ENST00000480362 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
UPF3A-206ENST00000480362 IGLV7-43P04211 117 aa10.77□□□□□ -0.69
UPF3A-206ENST00000480362 HIGD2AQ9BW72 106 aa10.76□□□□□ -0.69
UPF3A-206ENST00000480362 ERC2-IT1O76042 136 aa10.75□□□□□ -0.69
UPF3A-206ENST00000480362 DNAL4O96015 105 aa10.75□□□□□ -0.69
UPF3A-206ENST00000480362 LCE2DQ5TA82 110 aaPredicted RBP10.75□□□□□ -0.69
UPF3A-206ENST00000480362 ZNF861PO60384 105 aa10.74□□□□□ -0.69
UPF3A-206ENST00000480362 RPL37AP61513 92 aaKnown RBP10.74□□□□□ -0.69
UPF3A-206ENST00000480362 UBE2V1Q13404 147 aa10.73□□□□□ -0.69
UPF3A-206ENST00000480362 APOBP04114 4563 aaKnown RBP10.72□□□□□ -0.69
UPF3A-206ENST00000480362 C9JAW5 83 aa10.72□□□□□ -0.69
UPF3A-206ENST00000480362 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.72□□□□□ -0.69
UPF3A-206ENST00000480362 Q6ZQY7 126 aa10.72□□□□□ -0.69
UPF3A-206ENST00000480362 MTURNQ8N3F0 131 aa10.7□□□□□ -0.7
UPF3A-206ENST00000480362 ST20-AS1Q8NBB2 130 aa10.7□□□□□ -0.7
UPF3A-206ENST00000480362 BIRC6Q9NR09 4857 aa10.69□□□□□ -0.7
UPF3A-206ENST00000480362 ORMDL1Q9P0S3 153 aa10.69□□□□□ -0.7
UPF3A-206ENST00000480362 BAALC-AS2P0C853 105 aa10.68□□□□□ -0.7
UPF3A-206ENST00000480362 DEFB105AQ8NG35 78 aa10.68□□□□□ -0.7
UPF3A-206ENST00000480362 OCIAD2Q56VL3 154 aa10.66□□□□□ -0.7
UPF3A-206ENST00000480362 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
UPF3A-206ENST00000480362 FAM229AH3BQW9 127 aa10.65□□□□□ -0.7
UPF3A-206ENST00000480362 LINC01547P58512 204 aaPredicted RBP10.65□□□□□ -0.7
UPF3A-206ENST00000480362 KRTAP10-4P60372 401 aaPredicted RBP10.64□□□□□ -0.71
UPF3A-206ENST00000480362 IGLV5-48A0A075B6I7 105 aa10.63□□□□□ -0.71
UPF3A-206ENST00000480362 F8W1H4 67 aa10.63□□□□□ -0.71
UPF3A-206ENST00000480362 H3BT86 120 aa10.63□□□□□ -0.71
UPF3A-206ENST00000480362 GHRHP01286 108 aa10.63□□□□□ -0.71
UPF3A-206ENST00000480362 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
UPF3A-206ENST00000480362 Q8N377 158 aa10.63□□□□□ -0.71
UPF3A-206ENST00000480362 TMEM256-PLSCR3K7ERE1 68 aa10.62□□□□□ -0.71
UPF3A-206ENST00000480362 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
UPF3A-206ENST00000480362 ANKRD29Q8N6D5 301 aa10.62□□□□□ -0.71
UPF3A-206ENST00000480362 TEX49A0A1B0GTD5 131 aa10.61□□□□□ -0.71
UPF3A-206ENST00000480362 H3BQ85 93 aa10.61□□□□□ -0.71
UPF3A-206ENST00000480362 GAGE2AQ6NT46 116 aa10.61□□□□□ -0.71
UPF3A-206ENST00000480362 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
UPF3A-206ENST00000480362 ZNF706Q9Y5V0 76 aaPredicted RBP10.6□□□□□ -0.71
UPF3A-206ENST00000480362 Q5VSD8 79 aa10.59□□□□□ -0.71
UPF3A-206ENST00000480362 SPINK6Q6UWN8 80 aa10.59□□□□□ -0.71
UPF3A-206ENST00000480362 PPDPFLQ8WWR9 84 aa10.59□□□□□ -0.71
UPF3A-206ENST00000480362 LINC01600Q96MT4 127 aa10.59□□□□□ -0.71
UPF3A-206ENST00000480362 SPRR1BP22528 89 aa10.58□□□□□ -0.72
UPF3A-206ENST00000480362 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
UPF3A-206ENST00000480362 RYR1P21817 5038 aa10.57□□□□□ -0.72
UPF3A-206ENST00000480362 VPS13BQ7Z7G8 4022 aa10.56□□□□□ -0.72
UPF3A-206ENST00000480362 NDUFV3P56181 108 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms