RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 TOMM7Q9P0U1 55 aa2.8□□□□□ -1.96
PBRM1-220ENST00000480064 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
PBRM1-220ENST00000480064 MED13Q9UHV7 2174 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 IGKV3OR2-268A0A0C4DH90 116 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 TFF1P04155 84 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 APELAP0DMC3 54 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 SPINK7P58062 85 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 CSAG1Q6PB30 78 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 DEFB108BQ8NET1 73 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
PBRM1-220ENST00000480064 SDK1Q7Z5N4 2213 aa2.77□□□□□ -1.97
PBRM1-220ENST00000480064 ACYP2P14621 99 aa2.77□□□□□ -1.97
PBRM1-220ENST00000480064 PCOTHQ58A44 107 aa2.77□□□□□ -1.97
PBRM1-220ENST00000480064 UNQ6190/PRO20217Q6UXQ8 127 aa2.77□□□□□ -1.97
PBRM1-220ENST00000480064 TNCP24821 2201 aa2.76□□□□□ -1.97
PBRM1-220ENST00000480064 PI4KAP42356 2102 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 A0A0C4DFX4 3053 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 GVQW2A0A096LPI5 108 aaPredicted RBP2.75□□□□□ -1.97
PBRM1-220ENST00000480064 A0A1B0GU69 56 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 RHPN1-AS1Q9BWJ2 59 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 PCNTO95613 3336 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 CR1P17927 2039 aa2.75□□□□□ -1.97
PBRM1-220ENST00000480064 IGKV3-7A0A075B6H7 116 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 LINC00959A0A1B0GUT2 108 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 NUPR2A6NF83 97 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 A8MTW9 85 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 DEFB133Q30KQ1 61 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 DEFB104AQ8WTQ1 72 aa2.74□□□□□ -1.97
PBRM1-220ENST00000480064 PDE4DIPQ5VU43 2346 aa2.73□□□□□ -1.97
PBRM1-220ENST00000480064 PKD1L2Q7Z442 2459 aa2.73□□□□□ -1.97
PBRM1-220ENST00000480064 K7EQZ3 153 aa2.72□□□□□ -1.97
PBRM1-220ENST00000480064 DEFB131AP59861 70 aa2.72□□□□□ -1.97
PBRM1-220ENST00000480064 PRB3Q04118 309 aaPredicted RBP2.72□□□□□ -1.97
PBRM1-220ENST00000480064 TRGV1A0A0A0MS02 117 aa2.71□□□□□ -1.98
PBRM1-220ENST00000480064 LYNX1G3V0Z9 82 aa2.7□□□□□ -1.98
PBRM1-220ENST00000480064 ANGP03950 147 aaKnown RBP2.7□□□□□ -1.98
PBRM1-220ENST00000480064 PRB1P04280 392 aa2.7□□□□□ -1.98
PBRM1-220ENST00000480064 DNAJC13O75165 2243 aa2.7□□□□□ -1.98
PBRM1-220ENST00000480064 F5P12259 2224 aa2.7□□□□□ -1.98
PBRM1-220ENST00000480064 TNRC18O15417 2968 aaPredicted RBP2.7□□□□□ -1.98
PBRM1-220ENST00000480064 UTRNP46939 3433 aa2.69□□□□□ -1.98
PBRM1-220ENST00000480064 SPINK13Q1W4C9 94 aa2.69□□□□□ -1.98
PBRM1-220ENST00000480064 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PBRM1-220ENST00000480064 WFDC10BQ8IUB3 73 aa2.68□□□□□ -1.98
PBRM1-220ENST00000480064 WFDC13Q8IUB5 93 aa2.67□□□□□ -1.98
PBRM1-220ENST00000480064 CADP27708 2225 aa2.66□□□□□ -1.98
PBRM1-220ENST00000480064 H3BUX3 64 aa2.66□□□□□ -1.98
PBRM1-220ENST00000480064 DEFB119Q8N690 84 aa2.66□□□□□ -1.98
PBRM1-220ENST00000480064 C5orf56Q8N8D9 126 aa2.66□□□□□ -1.98
PBRM1-220ENST00000480064 C6orf48Q9UBA6 75 aa2.66□□□□□ -1.98
PBRM1-220ENST00000480064 NAV3Q8IVL0 2385 aa2.65□□□□□ -1.98
PBRM1-220ENST00000480064 RPL37AP61513 92 aaKnown RBP2.65□□□□□ -1.99
PBRM1-220ENST00000480064 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
PBRM1-220ENST00000480064 HTN1P15515 57 aa2.64□□□□□ -1.99
PBRM1-220ENST00000480064 CNTRLQ7Z7A1 2325 aa2.64□□□□□ -1.99
PBRM1-220ENST00000480064 G3V318 75 aa2.63□□□□□ -1.99
PBRM1-220ENST00000480064 J3QKU1 62 aa2.63□□□□□ -1.99
PBRM1-220ENST00000480064 KIAA0100Q14667 2235 aaKnown RBP2.62□□□□□ -1.99
PBRM1-220ENST00000480064 KRTAP6-3Q3LI67 103 aa2.62□□□□□ -1.99
PBRM1-220ENST00000480064 Q6ZRX8 168 aa2.62□□□□□ -1.99
PBRM1-220ENST00000480064 DEFB1P60022 68 aa2.61□□□□□ -1.99
PBRM1-220ENST00000480064 DEFB105AQ8NG35 78 aa2.61□□□□□ -1.99
PBRM1-220ENST00000480064 CCL19Q99731 98 aa2.61□□□□□ -1.99
PBRM1-220ENST00000480064 LINC00472Q9H8W2 130 aa2.61□□□□□ -1.99
PBRM1-220ENST00000480064 TRANK1O15050 2925 aa2.61□□□□□ -1.99
PBRM1-220ENST00000480064 GOLGB1Q14789 3259 aaKnown RBP2.6□□□□□ -1.99
PBRM1-220ENST00000480064 LY6G6CO95867 125 aa2.6□□□□□ -1.99
PBRM1-220ENST00000480064 DEFB109BQ30KR1 87 aa2.6□□□□□ -1.99
PBRM1-220ENST00000480064 PRO3102Q9H379 93 aa2.6□□□□□ -1.99
PBRM1-220ENST00000480064 PRRC2BQ5JSZ5 2229 aaKnown RBP2.6□□□□□ -1.99
PBRM1-220ENST00000480064 EP400Q96L91 3159 aa2.59□□□□□ -1.99
PBRM1-220ENST00000480064 SPRR1AP35321 89 aa2.59□□□□□ -1.99
PBRM1-220ENST00000480064 DEFB132Q7Z7B7 95 aa2.59□□□□□ -1.99
PBRM1-220ENST00000480064 MMP24-AS1A0A0U1RRL7 71 aa2.58□□□□□ -2
PBRM1-220ENST00000480064 PRO0255Q9UI72 69 aa2.58□□□□□ -2
PBRM1-220ENST00000480064 U3KQA8 63 aa2.58□□□□□ -2
PBRM1-220ENST00000480064 ZFHX3Q15911 3703 aa2.57□□□□□ -2
PBRM1-220ENST00000480064 CLPSL2Q6UWE3 100 aa2.57□□□□□ -2
PBRM1-220ENST00000480064 COX6B2Q6YFQ2 88 aa2.57□□□□□ -2
PBRM1-220ENST00000480064 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
PBRM1-220ENST00000480064 ASCC3Q8N3C0 2202 aaKnown RBP2.57□□□□□ -2
PBRM1-220ENST00000480064 URB1O60287 2271 aaKnown RBP2.57□□□□□ -2
PBRM1-220ENST00000480064 PTPRQQ9UMZ3 2332 aa2.57□□□□□ -2
PBRM1-220ENST00000480064 KMT2BQ9UMN6 2715 aaPredicted RBP2.56□□□□□ -2
PBRM1-220ENST00000480064 COL6A3P12111 3177 aa2.56□□□□□ -2
PBRM1-220ENST00000480064 NOP10Q9NPE3 64 aaKnown RBP2.56□□□□□ -2
PBRM1-220ENST00000480064 A0A087WTM6 91 aa2.55□□□□□ -2
PBRM1-220ENST00000480064 ABCA1O95477 2261 aa2.55□□□□□ -2
PBRM1-220ENST00000480064 SPRR1BP22528 89 aa2.55□□□□□ -2
PBRM1-220ENST00000480064 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
PBRM1-220ENST00000480064 SORL1Q92673 2214 aa2.55□□□□□ -2
PBRM1-220ENST00000480064 PLCE1Q9P212 2302 aa2.54□□□□□ -2
PBRM1-220ENST00000480064 LELP1Q5T871 98 aa2.54□□□□□ -2
PBRM1-220ENST00000480064 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
PBRM1-220ENST00000480064 MED13LQ71F56 2210 aa2.54□□□□□ -2
PBRM1-220ENST00000480064 SETXQ7Z333 2677 aaKnown RBP2.52□□□□□ -2.01
PBRM1-220ENST00000480064 ASXL3Q9C0F0 2248 aa2.52□□□□□ -2.01
PBRM1-220ENST00000480064 TECTAO75443 2155 aa2.52□□□□□ -2.01
PBRM1-220ENST00000480064 SZT2Q5T011 3432 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms