RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 TSPEAR-AS2P59090 65 aa6.26□□□□□ -1.41
SMURF1-204ENST00000480055 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
SMURF1-204ENST00000480055 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
SMURF1-204ENST00000480055 H0Y9J4 135 aa6.25□□□□□ -1.41
SMURF1-204ENST00000480055 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
SMURF1-204ENST00000480055 SPANXA1Q9NS26 97 aa6.25□□□□□ -1.41
SMURF1-204ENST00000480055 UBE2D4Q9Y2X8 147 aa6.25□□□□□ -1.41
SMURF1-204ENST00000480055 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 LGALS3P17931 250 aaKnown RBP6.24□□□□□ -1.41
SMURF1-204ENST00000480055 UBE2BP63146 152 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
SMURF1-204ENST00000480055 GAGE2EQ4V326 116 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 TMEM170BQ5T4T1 132 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 FAM104AQ969W3 186 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 TIMM21Q9BVV7 248 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 GAGE2DQ9UEU5 116 aa6.24□□□□□ -1.41
SMURF1-204ENST00000480055 CSDC2Q9Y534 153 aaKnown RBP6.24□□□□□ -1.41
SMURF1-204ENST00000480055 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 NDUFA1O15239 70 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 CFC1P0CG37 223 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 Q6ZUT4 128 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 VCX2Q9H322 139 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 PRO1854Q9UHT4 67 aa6.23□□□□□ -1.41
SMURF1-204ENST00000480055 TINCRA0A1B0GVN0 87 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 TIMM17BO60830 172 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 ETDBQ3ZM63 59 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 FAM19A3Q7Z5A8 133 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 SPANXDQ9BXN6 97 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 SPANXCQ9NY87 97 aa6.22□□□□□ -1.41
SMURF1-204ENST00000480055 IGLV5-45A0A087WSX0 123 aa6.21□□□□□ -1.42
SMURF1-204ENST00000480055 F8WDY8 70 aa6.21□□□□□ -1.42
SMURF1-204ENST00000480055 RPL13AP40429 203 aaKnown RBP6.21□□□□□ -1.42
SMURF1-204ENST00000480055 UNQ6190/PRO20217Q6UXQ8 127 aa6.21□□□□□ -1.42
SMURF1-204ENST00000480055 KRTAP11-1Q8IUC1 163 aa6.21□□□□□ -1.42
SMURF1-204ENST00000480055 PPDPFQ9H3Y8 114 aa6.21□□□□□ -1.42
SMURF1-204ENST00000480055 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 C10orf25Q5T742 122 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 TEN1Q86WV5 123 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 SIGMAR1Q99720 223 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 LITAFQ99732 161 aa6.2□□□□□ -1.42
SMURF1-204ENST00000480055 TRBV30A0A0K0K1B3 111 aa6.19□□□□□ -1.42
SMURF1-204ENST00000480055 A4D1N5 150 aa6.19□□□□□ -1.42
SMURF1-204ENST00000480055 TCL1BO95988 128 aa6.19□□□□□ -1.42
SMURF1-204ENST00000480055 C6orf48Q9UBA6 75 aa6.19□□□□□ -1.42
SMURF1-204ENST00000480055 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
SMURF1-204ENST00000480055 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
SMURF1-204ENST00000480055 TLX1NBP0CAT3 122 aa6.18□□□□□ -1.42
SMURF1-204ENST00000480055 IFITM1P13164 125 aa6.18□□□□□ -1.42
SMURF1-204ENST00000480055 LOC107984156A0A0G2JMH3 177 aa6.17□□□□□ -1.42
SMURF1-204ENST00000480055 PSMB2P49721 201 aa6.17□□□□□ -1.42
SMURF1-204ENST00000480055 ARL17AQ8IVW1 177 aa6.17□□□□□ -1.42
SMURF1-204ENST00000480055 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
SMURF1-204ENST00000480055 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
SMURF1-204ENST00000480055 MUSTN1Q8IVN3 82 aa6.16□□□□□ -1.42
SMURF1-204ENST00000480055 NDUFC2-KCTD14E9PQ53 114 aa6.15□□□□□ -1.42
SMURF1-204ENST00000480055 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
SMURF1-204ENST00000480055 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
SMURF1-204ENST00000480055 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
SMURF1-204ENST00000480055 SLC25A20O43772 301 aa6.14□□□□□ -1.43
SMURF1-204ENST00000480055 ZNF861PO60384 105 aa6.14□□□□□ -1.43
SMURF1-204ENST00000480055 HERVK_113P63121 156 aa6.14□□□□□ -1.43
SMURF1-204ENST00000480055 ATXN8Q156A1 80 aa6.14□□□□□ -1.43
SMURF1-204ENST00000480055 C9orf129Q5T035 196 aaKnown RBP6.13□□□□□ -1.43
SMURF1-204ENST00000480055 MTURNQ8N3F0 131 aa6.13□□□□□ -1.43
SMURF1-204ENST00000480055 COPS9Q8WXC6 57 aa6.13□□□□□ -1.43
SMURF1-204ENST00000480055 TRBV10-2A0A0K0K1G8 114 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 H3BT86 120 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 PRSS2P07478 247 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 CKS1BP61024 79 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 KIAA0087Q14695 138 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 ANKRD29Q8N6D5 301 aa6.12□□□□□ -1.43
SMURF1-204ENST00000480055 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
SMURF1-204ENST00000480055 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 ADAMTSL4-AS1Q5T5F5 129 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 TOMM7Q9P0U1 55 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 C22orf24Q9Y442 160 aa6.11□□□□□ -1.43
SMURF1-204ENST00000480055 MUC17Q685J3 4493 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 A0A1B0GV72 72 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 C9JAW5 83 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 SPINK8P0C7L1 97 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 CRYGAP11844 174 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 HERV-K104P63124 156 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 C6orf226Q5I0X4 101 aa6.1□□□□□ -1.43
SMURF1-204ENST00000480055 SMIM1B2RUZ4 78 aa6.09□□□□□ -1.43
SMURF1-204ENST00000480055 LST1O00453 97 aa6.09□□□□□ -1.43
SMURF1-204ENST00000480055 COX6CP09669 75 aa6.09□□□□□ -1.43
SMURF1-204ENST00000480055 RPL28P46779 137 aaKnown RBP6.09□□□□□ -1.43
SMURF1-204ENST00000480055 ZNF625Q96I27 306 aaPredicted RBP6.09□□□□□ -1.43
SMURF1-204ENST00000480055 XAGE1AQ9HD64 81 aa6.09□□□□□ -1.43
SMURF1-204ENST00000480055 FAM240AA0A1B0GVK7 77 aa6.08□□□□□ -1.44
SMURF1-204ENST00000480055 SFTA2Q6UW10 78 aa6.08□□□□□ -1.44
SMURF1-204ENST00000480055 A0A087X002 238 aa6.07□□□□□ -1.44
SMURF1-204ENST00000480055 BCE1O60756 84 aa6.07□□□□□ -1.44
SMURF1-204ENST00000480055 Q1RN00 199 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms