RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 GAS8-AS1O95177 125 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 ODF3L2Q3SX64 289 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 MRPL34Q9BQ48 92 aaKnown RBP2.83□□□□□ -1.96
SCN2A-205ENST00000480032 ZFHX2Q9C0A1 2572 aaPredicted RBP2.83□□□□□ -1.96
SCN2A-205ENST00000480032 PTPRSQ13332 1948 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 KLK12Q9UKR0 248 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 COL6A5A8TX70 2615 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 PRR4Q16378 134 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 C1orf134Q5TEV5 83 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 DEFB135Q30KP9 77 aa2.83□□□□□ -1.96
SCN2A-205ENST00000480032 C11orf45Q8TAV5 145 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 CASC10Q5T4H9 136 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 ATRQ13535 2644 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 SPRR1BP22528 89 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 OXTP01178 125 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 MAST4O15021 2626 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 HECTD1Q9ULT8 2610 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 SLURP1P55000 103 aa2.82□□□□□ -1.96
SCN2A-205ENST00000480032 SPINK6Q6UWN8 80 aa2.81□□□□□ -1.96
SCN2A-205ENST00000480032 MSMPQ1L6U9 139 aa2.81□□□□□ -1.96
SCN2A-205ENST00000480032 LINC01556Q5JQF7 62 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 ZNF575Q86XF7 245 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 LINC00612Q8N6U2 182 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 ROMO1P60602 79 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 K7EQZ3 153 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 SPINT4Q6UDR6 99 aa2.8□□□□□ -1.96
SCN2A-205ENST00000480032 UNQ6190/PRO20217Q6UXQ8 127 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 Q6ZR54 194 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 A0A1B0GVX0 72 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 IGLV1-51P01701 117 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 GCN1Q92616 2671 aaKnown RBP2.79□□□□□ -1.96
SCN2A-205ENST00000480032 U3KQA8 63 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 C9orf163Q8N9P6 203 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 LINC00476Q8WZB0 136 aa2.79□□□□□ -1.96
SCN2A-205ENST00000480032 TEP1Q99973 2627 aaKnown RBP2.78□□□□□ -1.96
SCN2A-205ENST00000480032 IGLV9-49A0A0B4J1Y8 123 aa2.78□□□□□ -1.96
SCN2A-205ENST00000480032 ITPR3Q14573 2671 aa2.78□□□□□ -1.96
SCN2A-205ENST00000480032 PLA2G2CQ5R387 149 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 PCSK5Q92824 1860 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 DSCR10P59022 87 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 C8orf17Q9NRJ1 99 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 SPRR1AP35321 89 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 USP24Q9UPU5 2620 aa2.77□□□□□ -1.97
SCN2A-205ENST00000480032 COX6A2Q02221 97 aa2.76□□□□□ -1.97
SCN2A-205ENST00000480032 STAB2Q8WWQ8 2551 aa2.76□□□□□ -1.97
SCN2A-205ENST00000480032 CSNK1G2-AS1Q8NCQ2 148 aa2.75□□□□□ -1.97
SCN2A-205ENST00000480032 CIRBP-AS1Q8TBR5 109 aa2.74□□□□□ -1.97
SCN2A-205ENST00000480032 PSORS1C2Q9UIG4 136 aa2.74□□□□□ -1.97
SCN2A-205ENST00000480032 SETXQ7Z333 2677 aaKnown RBP2.74□□□□□ -1.97
SCN2A-205ENST00000480032 Q6YL49 198 aa2.74□□□□□ -1.97
SCN2A-205ENST00000480032 A0A1W2PNM2 257 aa2.74□□□□□ -1.97
SCN2A-205ENST00000480032 PCOTHQ58A44 107 aa2.73□□□□□ -1.97
SCN2A-205ENST00000480032 KRTAP29-1A8MX34 341 aaPredicted RBP2.73□□□□□ -1.97
SCN2A-205ENST00000480032 CYSTM1Q9H1C7 97 aa2.73□□□□□ -1.97
SCN2A-205ENST00000480032 SPINK1P00995 79 aa2.73□□□□□ -1.97
SCN2A-205ENST00000480032 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
SCN2A-205ENST00000480032 Q8N377 158 aa2.72□□□□□ -1.97
SCN2A-205ENST00000480032 IGLV5-52A0A0A0MRZ9 124 aa2.72□□□□□ -1.97
SCN2A-205ENST00000480032 A0A1B0GU33 70 aa2.72□□□□□ -1.97
SCN2A-205ENST00000480032 C19orf73Q9NVV2 129 aa2.72□□□□□ -1.97
SCN2A-205ENST00000480032 IGFL1Q6UW32 110 aa2.71□□□□□ -1.97
SCN2A-205ENST00000480032 LINC00472Q9H8W2 130 aa2.71□□□□□ -1.97
SCN2A-205ENST00000480032 RTL8CO15255 209 aa2.71□□□□□ -1.97
SCN2A-205ENST00000480032 A0A096LNT2 108 aa2.71□□□□□ -1.98
SCN2A-205ENST00000480032 DEFB116Q30KQ4 102 aa2.71□□□□□ -1.98
SCN2A-205ENST00000480032 PRRC2CQ9Y520 2896 aaKnown RBP2.71□□□□□ -1.98
SCN2A-205ENST00000480032 C20orf166-AS1Q96NR2 134 aa2.71□□□□□ -1.98
SCN2A-205ENST00000480032 M0R2T5 61 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 KMT2BQ9UMN6 2715 aaPredicted RBP2.7□□□□□ -1.98
SCN2A-205ENST00000480032 FLNBO75369 2602 aaKnown RBP2.7□□□□□ -1.98
SCN2A-205ENST00000480032 DNAH10OSP0CZ25 163 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 C9orf129Q5T035 196 aaKnown RBP2.7□□□□□ -1.98
SCN2A-205ENST00000480032 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 SRCAPQ6ZRS2 3230 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 SMR3AQ99954 134 aa2.7□□□□□ -1.98
SCN2A-205ENST00000480032 PLAC8Q9NZF1 115 aa2.69□□□□□ -1.98
SCN2A-205ENST00000480032 HRES1P13985 223 aa2.69□□□□□ -1.98
SCN2A-205ENST00000480032 RPL37P61927 97 aaKnown RBP2.69□□□□□ -1.98
SCN2A-205ENST00000480032 DEFB1P60022 68 aa2.69□□□□□ -1.98
SCN2A-205ENST00000480032 NIPBLQ6KC79 2804 aaeCLIP2.69□□□□□ -1.98
SCN2A-205ENST00000480032 MMP24-AS1A0A0U1RRL7 71 aa2.69□□□□□ -1.98
SCN2A-205ENST00000480032 NSD1Q96L73 2696 aaPredicted RBP2.68□□□□□ -1.98
SCN2A-205ENST00000480032 BAHCC1Q9P281 2608 aa2.68□□□□□ -1.98
SCN2A-205ENST00000480032 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
SCN2A-205ENST00000480032 FAM229BQ4G0N7 80 aa2.68□□□□□ -1.98
SCN2A-205ENST00000480032 Q5W150 140 aa2.67□□□□□ -1.98
SCN2A-205ENST00000480032 CFAP46Q8IYW2 2715 aa2.67□□□□□ -1.98
SCN2A-205ENST00000480032 ST20-AS1Q8NBB2 130 aa2.67□□□□□ -1.98
SCN2A-205ENST00000480032 C18orf65Q6ZTR6 163 aa2.67□□□□□ -1.98
SCN2A-205ENST00000480032 FLNAP21333 2647 aaKnown RBP2.66□□□□□ -1.98
SCN2A-205ENST00000480032 CR1P17927 2039 aa2.66□□□□□ -1.98
SCN2A-205ENST00000480032 UTP20O75691 2785 aaKnown RBP2.66□□□□□ -1.98
SCN2A-205ENST00000480032 PROK1P58294 105 aa2.65□□□□□ -1.98
SCN2A-205ENST00000480032 PRLHP81277 87 aa2.65□□□□□ -1.98
SCN2A-205ENST00000480032 A0A1W2PPR1 153 aa2.65□□□□□ -1.99
SCN2A-205ENST00000480032 COL27A1Q8IZC6 1860 aaPredicted RBP2.65□□□□□ -1.99
SCN2A-205ENST00000480032 RPS29P62273 56 aaKnown RBP2.65□□□□□ -1.99
SCN2A-205ENST00000480032 CHD6Q8TD26 2715 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms