RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 C19orf73Q9NVV2 129 aa8.87□□□□□ -0.99
CNKSR3-204ENST00000479339 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
CNKSR3-204ENST00000479339 IGHV4-30-4P0DP06 118 aa8.86□□□□□ -0.99
CNKSR3-204ENST00000479339 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
CNKSR3-204ENST00000479339 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
CNKSR3-204ENST00000479339 STHQ8IWL8 128 aa8.85□□□□□ -0.99
CNKSR3-204ENST00000479339 C1orf64Q8NEQ6 169 aa8.85□□□□□ -0.99
CNKSR3-204ENST00000479339 RETNQ9HD89 108 aa8.85□□□□□ -0.99
CNKSR3-204ENST00000479339 TRGV2A0A075B6R0 118 aa8.84□□□□□ -0.99
CNKSR3-204ENST00000479339 A0A1B0GUV1 79 aa8.84□□□□□ -0.99
CNKSR3-204ENST00000479339 DIRC1Q969H9 104 aa8.84□□□□□ -0.99
CNKSR3-204ENST00000479339 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
CNKSR3-204ENST00000479339 LOC100131303A0A0U1RQF7 123 aa8.83□□□□□ -1
CNKSR3-204ENST00000479339 C16orf74Q96GX8 76 aa8.83□□□□□ -1
CNKSR3-204ENST00000479339 TRAV22A0A0B4J277 110 aa8.83□□□□□ -1
CNKSR3-204ENST00000479339 TRGV4A0A0C4DH28 118 aa8.83□□□□□ -1
CNKSR3-204ENST00000479339 UBE2BP63146 152 aa8.83□□□□□ -1
CNKSR3-204ENST00000479339 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
CNKSR3-204ENST00000479339 C3orf84H3BNL1 204 aa8.81□□□□□ -1
CNKSR3-204ENST00000479339 HUWE1Q7Z6Z7 4374 aaKnown RBP8.81□□□□□ -1
CNKSR3-204ENST00000479339 Q8NDZ9 215 aa8.81□□□□□ -1
CNKSR3-204ENST00000479339 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
CNKSR3-204ENST00000479339 KTN1-AS1Q86SY8 53 aa8.8□□□□□ -1
CNKSR3-204ENST00000479339 Q8N9L7 120 aa8.79□□□□□ -1
CNKSR3-204ENST00000479339 A0A1B0GW54 56 aa8.78□□□□□ -1
CNKSR3-204ENST00000479339 PSPHP1O15172 72 aa8.78□□□□□ -1
CNKSR3-204ENST00000479339 CELA1Q9UNI1 258 aa8.78□□□□□ -1
CNKSR3-204ENST00000479339 ELOF1P60002 83 aaKnown RBP8.78□□□□□ -1
CNKSR3-204ENST00000479339 ODF3L2Q3SX64 289 aa8.78□□□□□ -1
CNKSR3-204ENST00000479339 HIGD2BQ4VC39 106 aa8.77□□□□□ -1.01
CNKSR3-204ENST00000479339 PSCAO43653 123 aa8.76□□□□□ -1.01
CNKSR3-204ENST00000479339 UBE2AP49459 152 aa8.76□□□□□ -1.01
CNKSR3-204ENST00000479339 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
CNKSR3-204ENST00000479339 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
CNKSR3-204ENST00000479339 ZNF73O43830 326 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 NDUFB1O75438 58 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 WFDC10AQ9H1F0 79 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 A0A0J9YWU9 116 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 LRCOL1A6NCL2 159 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 C9orf116Q5BN46 136 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 CASC10Q5T4H9 136 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 LINC00269Q8N2A0 174 aa8.75□□□□□ -1.01
CNKSR3-204ENST00000479339 DNAH7Q8WXX0 4024 aa8.74□□□□□ -1.01
CNKSR3-204ENST00000479339 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
CNKSR3-204ENST00000479339 LINC00588Q9Y4M8 146 aa8.74□□□□□ -1.01
CNKSR3-204ENST00000479339 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
CNKSR3-204ENST00000479339 NDUFS5O43920 106 aa8.73□□□□□ -1.01
CNKSR3-204ENST00000479339 ETDCA0A1B0GVM5 59 aa8.73□□□□□ -1.01
CNKSR3-204ENST00000479339 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
CNKSR3-204ENST00000479339 KMT2CQ8NEZ4 4911 aaKnown RBP8.73□□□□□ -1.01
CNKSR3-204ENST00000479339 CHCHD10Q8WYQ3 142 aaPredicted RBP8.72□□□□□ -1.01
CNKSR3-204ENST00000479339 A8MUN3 132 aa8.71□□□□□ -1.01
CNKSR3-204ENST00000479339 CMC4P56277 68 aaPredicted RBP8.71□□□□□ -1.01
CNKSR3-204ENST00000479339 RBM12B-AS1Q9P1G2 102 aa8.71□□□□□ -1.01
CNKSR3-204ENST00000479339 Q5VV11 94 aa8.71□□□□□ -1.02
CNKSR3-204ENST00000479339 GVQW2A0A096LPI5 108 aaPredicted RBP8.7□□□□□ -1.02
CNKSR3-204ENST00000479339 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
CNKSR3-204ENST00000479339 CLPSL2Q6UWE3 100 aa8.7□□□□□ -1.02
CNKSR3-204ENST00000479339 SPAG11BQ08648 103 aa8.69□□□□□ -1.02
CNKSR3-204ENST00000479339 ATP11AUNQ6ZP68 121 aa8.68□□□□□ -1.02
CNKSR3-204ENST00000479339 APOC4P55056 127 aa8.67□□□□□ -1.02
CNKSR3-204ENST00000479339 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
CNKSR3-204ENST00000479339 KLK12Q9UKR0 248 aa8.67□□□□□ -1.02
CNKSR3-204ENST00000479339 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 M0R378 163 aa8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 UNQ6190/PRO20217Q6UXQ8 127 aa8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 NBEAL2Q6ZNJ1 2754 aa8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 GYPEP15421 78 aa8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
CNKSR3-204ENST00000479339 DYNC2H1Q8NCM8 4307 aaKnown RBP8.65□□□□□ -1.02
CNKSR3-204ENST00000479339 GIG44P09565 113 aaPredicted RBP8.65□□□□□ -1.02
CNKSR3-204ENST00000479339 REG3AQ06141 175 aa8.65□□□□□ -1.02
CNKSR3-204ENST00000479339 CSNK1G2-AS1Q8NCQ2 148 aa8.65□□□□□ -1.02
CNKSR3-204ENST00000479339 IGLV5-48A0A075B6I7 105 aa8.64□□□□□ -1.03
CNKSR3-204ENST00000479339 CHKB-CPT1BH3BT56 60 aa8.64□□□□□ -1.03
CNKSR3-204ENST00000479339 C16orf90A8MZG2 172 aa8.63□□□□□ -1.03
CNKSR3-204ENST00000479339 RYR3Q15413 4870 aa8.63□□□□□ -1.03
CNKSR3-204ENST00000479339 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
CNKSR3-204ENST00000479339 Q9BRP9 147 aa8.63□□□□□ -1.03
CNKSR3-204ENST00000479339 ANGP03950 147 aaKnown RBP8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 STARD9Q9P2P6 4700 aa8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 IGLV10-54A0A075B6I4 117 aa8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 Q75L30 129 aa8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
CNKSR3-204ENST00000479339 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
CNKSR3-204ENST00000479339 HCG22E2RYF7 251 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 VPREB1P12018 145 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 MP68P56378 58 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 A6NN06 94 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 KCNQ1DNQ9H478 68 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.03
CNKSR3-204ENST00000479339 C4orf48Q5BLP8 95 aa8.58□□□□□ -1.04
CNKSR3-204ENST00000479339 LINC00208Q96KT6 92 aa8.58□□□□□ -1.04
CNKSR3-204ENST00000479339 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
CNKSR3-204ENST00000479339 A8MU10 97 aa8.58□□□□□ -1.04
CNKSR3-204ENST00000479339 H3BPC8 53 aa8.58□□□□□ -1.04
CNKSR3-204ENST00000479339 SACSQ9NZJ4 4579 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms