RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 IGHV1-58A0A0C4DH39 117 aa4.36□□□□□ -1.71
VCP-205ENST00000479300 UBE2L6O14933 153 aa4.36□□□□□ -1.71
VCP-205ENST00000479300 RPL39P62891 51 aaKnown RBP4.36□□□□□ -1.71
VCP-205ENST00000479300 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
VCP-205ENST00000479300 BCE1O60756 84 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 NPC2P61916 151 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 MRPS36P82909 103 aaKnown RBP4.35□□□□□ -1.71
VCP-205ENST00000479300 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 SUMO4Q6EEV6 95 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 SCXQ7RTU7 201 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 DSCR8Q96T75 97 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 TMEM243Q9BU79 118 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 SERP1Q9Y6X1 66 aa4.35□□□□□ -1.71
VCP-205ENST00000479300 IGLV4-3A0A075B6K6 122 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 TINCRA0A1B0GVN0 87 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 PRSS2P07478 247 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 BAALC-AS2P0C853 105 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 PFN2P35080 140 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
VCP-205ENST00000479300 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 FAM236DA0A1B0GTK5 79 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 USP17L23D6RBM5 183 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 M0QY20 66 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 NDUFA1O15239 70 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 DNAL4O96015 105 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 REG3AQ06141 175 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
VCP-205ENST00000479300 S100A7L2Q5SY68 101 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 ADAMTSL4-AS1Q5T5F5 129 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 CLPSL2Q6UWE3 100 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 LINC00269Q8N2A0 174 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 CYSTM1Q9H1C7 97 aa4.33□□□□□ -1.72
VCP-205ENST00000479300 NTM-AS1Q6ZSK4 140 aa4.32□□□□□ -1.72
VCP-205ENST00000479300 OBSCN-AS1Q96MR7 158 aa4.32□□□□□ -1.72
VCP-205ENST00000479300 C22orf24Q9Y442 160 aa4.32□□□□□ -1.72
VCP-205ENST00000479300 TNXBP22105 4242 aa4.32□□□□□ -1.72
VCP-205ENST00000479300 IGLV10-54A0A075B6I4 117 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 IGHV3-64A0A075B6Q5 118 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
VCP-205ENST00000479300 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 LINC00308Q8TCZ7 52 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
VCP-205ENST00000479300 IGLV5-45A0A087WSX0 123 aa4.3□□□□□ -1.72
VCP-205ENST00000479300 SMIM26A0A096LP01 95 aa4.3□□□□□ -1.72
VCP-205ENST00000479300 IGKV3OR2-268A0A0C4DH90 116 aa4.3□□□□□ -1.72
VCP-205ENST00000479300 TRBV10-3A0A0K0K1G6 114 aa4.3□□□□□ -1.72
VCP-205ENST00000479300 LINC01561Q8N1V8 128 aa4.3□□□□□ -1.72
VCP-205ENST00000479300 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
VCP-205ENST00000479300 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
VCP-205ENST00000479300 C9orf163Q8N9P6 203 aa4.29□□□□□ -1.72
VCP-205ENST00000479300 OPRPNQ99935 248 aaPredicted RBP4.29□□□□□ -1.72
VCP-205ENST00000479300 PKIGQ9Y2B9 76 aa4.29□□□□□ -1.72
VCP-205ENST00000479300 IGLV4-60A0A075B6I1 120 aa4.28□□□□□ -1.72
VCP-205ENST00000479300 IGKV3D-7A0A0C4DH55 119 aa4.28□□□□□ -1.72
VCP-205ENST00000479300 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
VCP-205ENST00000479300 H0YGX0 51 aa4.28□□□□□ -1.72
VCP-205ENST00000479300 RPL37AP61513 92 aaKnown RBP4.28□□□□□ -1.72
VCP-205ENST00000479300 V9GYY9 64 aa4.28□□□□□ -1.72
VCP-205ENST00000479300 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.27□□□□□ -1.73
VCP-205ENST00000479300 TRAV7A0A075B6U4 112 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 IGKV2-29A2NJV5 120 aaPredicted RBP4.27□□□□□ -1.73
VCP-205ENST00000479300 XCL1P47992 114 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 SEC61GP60059 68 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
VCP-205ENST00000479300 FAM19A3Q7Z5A8 133 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 FAM104AQ969W3 186 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
VCP-205ENST00000479300 NDUFC1O43677 76 aa4.26□□□□□ -1.73
VCP-205ENST00000479300 KLKP1Q107X0 134 aa4.26□□□□□ -1.73
VCP-205ENST00000479300 SS18Q15532 418 aa4.26□□□□□ -1.73
VCP-205ENST00000479300 C1orf195Q5TG92 126 aa4.26□□□□□ -1.73
VCP-205ENST00000479300 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
VCP-205ENST00000479300 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
VCP-205ENST00000479300 A0A087WVE0 104 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 H7BZZ5 65 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 PANO1I0J062 215 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 CCKP06307 115 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 HIGD2BQ4VC39 106 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 KRTAP26-1Q6PEX3 210 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 C14orf132Q9NPU4 83 aa4.25□□□□□ -1.73
VCP-205ENST00000479300 JMJD7-PLA2G4BH0Y9G9 81 aa4.24□□□□□ -1.73
VCP-205ENST00000479300 C20orf197Q8N268 126 aa4.24□□□□□ -1.73
VCP-205ENST00000479300 ZNF625Q96I27 306 aaPredicted RBP4.24□□□□□ -1.73
VCP-205ENST00000479300 LINC00959A0A1B0GUT2 108 aa4.23□□□□□ -1.73
VCP-205ENST00000479300 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
VCP-205ENST00000479300 LINC00167Q96N53 147 aa4.23□□□□□ -1.73
VCP-205ENST00000479300 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
VCP-205ENST00000479300 CDKN2A-AS1Q9UH64 79 aa4.23□□□□□ -1.73
VCP-205ENST00000479300 A0A087WYN8 130 aa4.22□□□□□ -1.73
VCP-205ENST00000479300 IGKV2-24A0A0C4DH68 120 aa4.22□□□□□ -1.73
VCP-205ENST00000479300 COX6A2Q02221 97 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms