RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
CCDC171-207ENST00000478913 IGKV1D-37A0A075B6S9 117 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV8-1A0A0A6YYK1 113 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 TRAV2A0A0B4J234 112 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 IGHV1-3A0A0C4DH29 117 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 M0R3E3 92 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 ATP5G1P05496 136 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 ATP5G2Q06055 141 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 CFAP126Q5VTH2 177 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 MORN3Q6PF18 240 aaPredicted RBP2.48□□□□□ -2.01
CCDC171-207ENST00000478913 SPINT4Q6UDR6 99 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 C10orf126Q8N4M7 172 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 TMEM133Q9H2Q1 129 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
CCDC171-207ENST00000478913 SS18L2Q9UHA2 77 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
CCDC171-207ENST00000478913 IGHV3OR16-8A0A075B7F1 116 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 IGHV3-21A0A0B4J1V1 117 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 C9JAW5 83 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 H3BMM0 161 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 M0R2P5 195 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 M0R381 172 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 SLC25A20O43772 301 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 CRYGDP07320 174 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 IGLC6P0CF74 106 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 C4orf26Q17RF5 130 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 C10orf55Q5SWW7 151 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 AMTNQ6UX39 209 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 UBE2WQ96B02 151 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 TOMM6Q96B49 74 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 PLEKHB2Q96CS7 222 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 DNAJC30Q96LL9 226 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 PRADC1Q9BSG0 188 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 SMIM2Q9BVW6 85 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 CNFNQ9BYD5 112 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 TP73-AS1Q9UF72 201 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 HHLA3Q9XRX5 114 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 LENEPQ9Y5L5 61 aa2.47□□□□□ -2.01
CCDC171-207ENST00000478913 TRBV7-3A0A075B6L6 115 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 IGKV2-40A0A087WW87 121 aaPredicted RBP2.46□□□□□ -2.02
CCDC171-207ENST00000478913 TRAV26-2A0A0B4J265 109 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 TRAV21A0A0B4J279 112 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 OOSP1A8MZH6 123 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 I3L2K1 104 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 IGKV2D-40P01614 121 aaPredicted RBP2.46□□□□□ -2.02
CCDC171-207ENST00000478913 MT-ATP8P03928 68 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 MGPP08493 103 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 EMP1P54849 157 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 FXYD7P58549 80 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
CCDC171-207ENST00000478913 RPS28P62857 69 aaKnown RBP2.46□□□□□ -2.02
CCDC171-207ENST00000478913 MEIG1Q5JSS6 88 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 TMEM170BQ5T4T1 132 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 C1orf195Q5TG92 126 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 C2orf82Q6UX34 121 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 ANKRD29Q8N6D5 301 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 METTL26Q96S19 204 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
CCDC171-207ENST00000478913 IGKV2D-26A0A0A0MRZ7 120 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 A0A0B4J2C4 111 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 TRBV10-2A0A0K0K1G8 114 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 FAM240AA0A1B0GVK7 77 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 C11orf86A6NJI1 115 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 BUB1B-PAK6H3BSN5 160 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 H3BT86 120 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 J3KT08 172 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 LEPROTO15243 131 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 APELAP0DMC3 54 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 SPRR2EP22531 72 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 SPRR2BP35325 72 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 SPRR2AP35326 72 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 UBE2D1P51668 147 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 UBE2D3P61077 147 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 UBE2D2P62837 147 aa2.45□□□□□ -2.02
CCDC171-207ENST00000478913 TRBV7-1A0A0A6YYK4 115 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 H7C2G1 150 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 J3QQQ9 107 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 TCL1BO95988 128 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 MIFP14174 115 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 CRIP1P50238 77 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 ZNF56Q15929 161 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 C9orf153Q5TBE3 101 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 C1orf158Q8N1D5 194 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 Q8N814 137 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 SLC25A29Q8N8R3 303 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 Q8TAT8 98 aa2.44□□□□□ -2.02
CCDC171-207ENST00000478913 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
CCDC171-207ENST00000478913 DSCAML1Q8TD84 2053 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 A0A0J9YX75 114 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 A0A0J9YY99 117 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 A0A1B0GX51 115 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 SDHAF1A6NFY7 115 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 K7EIM0 57 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 UQCRQO14949 82 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 RHOHQ15669 191 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 KRTAP19-2Q3LHN2 52 aa2.43□□□□□ -2.02
CCDC171-207ENST00000478913 S100A7L2Q5SY68 101 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms