RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 FAM19A1Q7Z5A9 133 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 ARL17AQ8IVW1 177 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
HDAC6-222ENST00000478095 TRBV10-3A0A0K0K1G6 114 aa6.2□□□□□ -1.42
HDAC6-222ENST00000478095 RPL28P46779 137 aaKnown RBP6.2□□□□□ -1.42
HDAC6-222ENST00000478095 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
HDAC6-222ENST00000478095 SPANXB1Q9NS25 103 aaPredicted RBP6.2□□□□□ -1.42
HDAC6-222ENST00000478095 CDIP1Q9H305 208 aa6.19□□□□□ -1.42
HDAC6-222ENST00000478095 NDUFC2O95298 119 aa6.18□□□□□ -1.42
HDAC6-222ENST00000478095 DDTP30046 118 aa6.18□□□□□ -1.42
HDAC6-222ENST00000478095 KRTAP13-1Q8IUC0 172 aa6.18□□□□□ -1.42
HDAC6-222ENST00000478095 TRBV10-2A0A0K0K1G8 114 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 PRYO14603 147 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 KRTAP1-4P0C5Y4 121 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 S100A7L2Q5SY68 101 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 PRR26Q8N8Z3 221 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 KCNQ1DNQ9H478 68 aa6.17□□□□□ -1.42
HDAC6-222ENST00000478095 HIGD2AQ9BW72 106 aa6.16□□□□□ -1.42
HDAC6-222ENST00000478095 SPANXDQ9BXN6 97 aa6.16□□□□□ -1.42
HDAC6-222ENST00000478095 SPANXCQ9NY87 97 aa6.16□□□□□ -1.42
HDAC6-222ENST00000478095 IGLV6-57P01721 117 aa6.15□□□□□ -1.42
HDAC6-222ENST00000478095 SPRR1AP35321 89 aa6.15□□□□□ -1.42
HDAC6-222ENST00000478095 KRTAP10-8P60410 259 aa6.15□□□□□ -1.42
HDAC6-222ENST00000478095 TRAV23DV6A0A075B6W5 121 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 C9orf118A6NHY6 69 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 S100A12P80511 92 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 OR13C6PQ8NH95 151 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 ANAPC11Q9NYG5 84 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 PAM16Q9Y3D7 125 aa6.14□□□□□ -1.43
HDAC6-222ENST00000478095 JOSD1Q15040 202 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-222ENST00000478095 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
HDAC6-222ENST00000478095 LINC00337Q8N6G1 96 aa6.13□□□□□ -1.43
HDAC6-222ENST00000478095 TNXBP22105 4242 aa6.13□□□□□ -1.43
HDAC6-222ENST00000478095 KRTAP4-16G5E9R7 235 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-222ENST00000478095 IFITM1P13164 125 aa6.12□□□□□ -1.43
HDAC6-222ENST00000478095 SPATA45Q537H7 98 aa6.12□□□□□ -1.43
HDAC6-222ENST00000478095 Q6ZVH6 145 aa6.12□□□□□ -1.43
HDAC6-222ENST00000478095 A0A087X002 238 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 B5MCH6 92 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 ZNF73O43830 326 aaPredicted RBP6.11□□□□□ -1.43
HDAC6-222ENST00000478095 COX8AP10176 69 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 C14orf144Q96I85 54 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
HDAC6-222ENST00000478095 PYY3Q5JQD4 70 aa6.1□□□□□ -1.43
HDAC6-222ENST00000478095 LINC00518Q8N0U6 118 aa6.1□□□□□ -1.43
HDAC6-222ENST00000478095 SMCR5Q8TEV8 140 aa6.1□□□□□ -1.43
HDAC6-222ENST00000478095 Q6ZRX8 168 aa6.09□□□□□ -1.43
HDAC6-222ENST00000478095 A6NDN8 102 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 ERC2-IT1O76042 136 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 CRYGAP11844 174 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 RPL13AP40429 203 aaKnown RBP6.08□□□□□ -1.44
HDAC6-222ENST00000478095 Q9BRP9 147 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 PPDPFQ9H3Y8 114 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
HDAC6-222ENST00000478095 DLEU1O43261 78 aa6.07□□□□□ -1.44
HDAC6-222ENST00000478095 SPRR4Q96PI1 79 aa6.07□□□□□ -1.44
HDAC6-222ENST00000478095 HIST1H4GQ99525 98 aa6.07□□□□□ -1.44
HDAC6-222ENST00000478095 CBY1Q9Y3M2 126 aa6.07□□□□□ -1.44
HDAC6-222ENST00000478095 A4D1N5 150 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 HINT1P49773 126 aaPredicted RBP6.06□□□□□ -1.44
HDAC6-222ENST00000478095 C6orf99Q4VX62 202 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 SLC25A34Q6PIV7 304 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 TYMSOSQ8TAI1 123 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 C12orf57Q99622 126 aa6.06□□□□□ -1.44
HDAC6-222ENST00000478095 TRAV13-2A0A0B4J235 113 aa6.05□□□□□ -1.44
HDAC6-222ENST00000478095 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
HDAC6-222ENST00000478095 C2orf91Q6ZV80 131 aa6.05□□□□□ -1.44
HDAC6-222ENST00000478095 ZNF706Q9Y5V0 76 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-222ENST00000478095 COX7BP24311 80 aa6.04□□□□□ -1.44
HDAC6-222ENST00000478095 LCE5AQ5TCM9 118 aa6.04□□□□□ -1.44
HDAC6-222ENST00000478095 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
HDAC6-222ENST00000478095 C3orf22Q8N5N4 141 aa6.04□□□□□ -1.44
HDAC6-222ENST00000478095 ELOF1P60002 83 aaKnown RBP6.03□□□□□ -1.44
HDAC6-222ENST00000478095 ST20-AS1Q8NBB2 130 aa6.03□□□□□ -1.44
HDAC6-222ENST00000478095 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
HDAC6-222ENST00000478095 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
HDAC6-222ENST00000478095 HIGD1BQ9P298 99 aa6.02□□□□□ -1.45
HDAC6-222ENST00000478095 TSPAN13O95857 204 aa6.01□□□□□ -1.45
HDAC6-222ENST00000478095 LINC00483Q53H64 154 aa6.01□□□□□ -1.45
HDAC6-222ENST00000478095 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
HDAC6-222ENST00000478095 IGLV9-49A0A0B4J1Y8 123 aa5.99□□□□□ -1.45
HDAC6-222ENST00000478095 A0A1B0GWB2 263 aa5.99□□□□□ -1.45
HDAC6-222ENST00000478095 C21orf62-AS1Q17RA5 79 aa5.99□□□□□ -1.45
HDAC6-222ENST00000478095 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 H7C2G1 150 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 CFC1BP0CG36 223 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 CFC1P0CG37 223 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 MOBPQ13875 183 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 CEND1Q8N111 149 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 LINC00304Q8N9R0 145 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 KRTAP4-11Q9BYQ6 195 aa5.98□□□□□ -1.45
HDAC6-222ENST00000478095 TAL2Q16559 108 aa5.97□□□□□ -1.45
HDAC6-222ENST00000478095 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
HDAC6-222ENST00000478095 RAB37Q96AX2 223 aa5.97□□□□□ -1.45
HDAC6-222ENST00000478095 KRTAP4-2Q9BYR5 136 aa5.97□□□□□ -1.45
HDAC6-222ENST00000478095 FXYD2P54710 66 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms