RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 BCE1O60756 84 aa9.41□□□□□ -0.9
SEC13-215ENST00000477547 CEND1Q8N111 149 aa9.41□□□□□ -0.9
SEC13-215ENST00000477547 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
SEC13-215ENST00000477547 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
SEC13-215ENST00000477547 KCNQ1DNQ9H478 68 aa9.4□□□□□ -0.9
SEC13-215ENST00000477547 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
SEC13-215ENST00000477547 A6NDN8 102 aa9.39□□□□□ -0.91
SEC13-215ENST00000477547 TMEM238LA0A1B0GVL6 79 aa9.38□□□□□ -0.91
SEC13-215ENST00000477547 A6NJY4 79 aa9.38□□□□□ -0.91
SEC13-215ENST00000477547 UBE2AP49459 152 aa9.38□□□□□ -0.91
SEC13-215ENST00000477547 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
SEC13-215ENST00000477547 CBY1Q9Y3M2 126 aa9.38□□□□□ -0.91
SEC13-215ENST00000477547 SPRR1AP35321 89 aa9.37□□□□□ -0.91
SEC13-215ENST00000477547 FXYD2P54710 66 aa9.37□□□□□ -0.91
SEC13-215ENST00000477547 PRLHP81277 87 aa9.37□□□□□ -0.91
SEC13-215ENST00000477547 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
SEC13-215ENST00000477547 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
SEC13-215ENST00000477547 RPL13AP40429 203 aaKnown RBP9.35□□□□□ -0.91
SEC13-215ENST00000477547 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
SEC13-215ENST00000477547 A0A0B4J2C4 111 aa9.34□□□□□ -0.91
SEC13-215ENST00000477547 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
SEC13-215ENST00000477547 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
SEC13-215ENST00000477547 KRTAP4-16G5E9R7 235 aaPredicted RBP9.33□□□□□ -0.92
SEC13-215ENST00000477547 ZNF861PO60384 105 aa9.33□□□□□ -0.92
SEC13-215ENST00000477547 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
SEC13-215ENST00000477547 CFC1P0CG37 223 aa9.33□□□□□ -0.92
SEC13-215ENST00000477547 SPINK6Q6UWN8 80 aa9.33□□□□□ -0.92
SEC13-215ENST00000477547 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
SEC13-215ENST00000477547 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
SEC13-215ENST00000477547 CTAG1AP78358 180 aa9.32□□□□□ -0.92
SEC13-215ENST00000477547 NHP2Q9NX24 153 aaKnown RBP9.32□□□□□ -0.92
SEC13-215ENST00000477547 LRP1Q07954 4544 aaKnown RBP9.32□□□□□ -0.92
SEC13-215ENST00000477547 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
SEC13-215ENST00000477547 M0R143 59 aa9.31□□□□□ -0.92
SEC13-215ENST00000477547 Q6ZRX8 168 aa9.31□□□□□ -0.92
SEC13-215ENST00000477547 SMIM11BQ8TCY0 68 aa9.31□□□□□ -0.92
SEC13-215ENST00000477547 HIGD2AQ9BW72 106 aa9.31□□□□□ -0.92
SEC13-215ENST00000477547 B5MCH6 92 aa9.3□□□□□ -0.92
SEC13-215ENST00000477547 H0Y9J4 135 aa9.3□□□□□ -0.92
SEC13-215ENST00000477547 H7C2G1 150 aa9.3□□□□□ -0.92
SEC13-215ENST00000477547 K7ERJ3 54 aa9.3□□□□□ -0.92
SEC13-215ENST00000477547 HINT1P49773 126 aaPredicted RBP9.3□□□□□ -0.92
SEC13-215ENST00000477547 BVES-AS1Q5T3Y7 98 aa9.3□□□□□ -0.92
SEC13-215ENST00000477547 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
SEC13-215ENST00000477547 Q1RN00 199 aa9.28□□□□□ -0.92
SEC13-215ENST00000477547 PRO1854Q9UHT4 67 aa9.28□□□□□ -0.92
SEC13-215ENST00000477547 COX7BP24311 80 aa9.27□□□□□ -0.93
SEC13-215ENST00000477547 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
SEC13-215ENST00000477547 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
SEC13-215ENST00000477547 A0A1B0GWB2 263 aa9.26□□□□□ -0.93
SEC13-215ENST00000477547 TRBV7-6A0A0J9YX20 115 aa9.25□□□□□ -0.93
SEC13-215ENST00000477547 SMCR5Q8TEV8 140 aa9.25□□□□□ -0.93
SEC13-215ENST00000477547 Q9BRP9 147 aa9.25□□□□□ -0.93
SEC13-215ENST00000477547 RNF213Q63HN8 5207 aa9.23□□□□□ -0.93
SEC13-215ENST00000477547 VAMP3Q15836 100 aa9.22□□□□□ -0.93
SEC13-215ENST00000477547 BATFQ16520 125 aa9.22□□□□□ -0.93
SEC13-215ENST00000477547 ERC2-IT1O76042 136 aa9.21□□□□□ -0.94
SEC13-215ENST00000477547 DHRS4-AS1Q9P1J3 65 aa9.21□□□□□ -0.94
SEC13-215ENST00000477547 TSPAN13O95857 204 aa9.2□□□□□ -0.94
SEC13-215ENST00000477547 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
SEC13-215ENST00000477547 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
SEC13-215ENST00000477547 SPRR4Q96PI1 79 aa9.18□□□□□ -0.94
SEC13-215ENST00000477547 TRIAP1O43715 76 aa9.17□□□□□ -0.94
SEC13-215ENST00000477547 PSMB2P49721 201 aa9.17□□□□□ -0.94
SEC13-215ENST00000477547 SLC25A20O43772 301 aa9.16□□□□□ -0.94
SEC13-215ENST00000477547 PCP4L1A6NKN8 68 aa9.15□□□□□ -0.94
SEC13-215ENST00000477547 OXTP01178 125 aa9.15□□□□□ -0.94
SEC13-215ENST00000477547 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
SEC13-215ENST00000477547 ST20-AS1Q8NBB2 130 aa9.14□□□□□ -0.95
SEC13-215ENST00000477547 H0YGX0 51 aa9.13□□□□□ -0.95
SEC13-215ENST00000477547 GAGE2AQ6NT46 116 aa9.13□□□□□ -0.95
SEC13-215ENST00000477547 LINC01600Q96MT4 127 aa9.13□□□□□ -0.95
SEC13-215ENST00000477547 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
SEC13-215ENST00000477547 FAM229BQ4G0N7 80 aa9.12□□□□□ -0.95
SEC13-215ENST00000477547 A0A087X002 238 aa9.11□□□□□ -0.95
SEC13-215ENST00000477547 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
SEC13-215ENST00000477547 COX6CP09669 75 aa9.11□□□□□ -0.95
SEC13-215ENST00000477547 PRR26Q8N8Z3 221 aa9.11□□□□□ -0.95
SEC13-215ENST00000477547 CRYGAP11844 174 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 LINC00483Q53H64 154 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 CLEC2BQ92478 149 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 NAA38Q9BRA0 125 aaKnown RBP9.1□□□□□ -0.95
SEC13-215ENST00000477547 SNHG12Q9BXW3 62 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 LRP2P98164 4655 aa9.1□□□□□ -0.95
SEC13-215ENST00000477547 Q6ZQY7 126 aa9.09□□□□□ -0.95
SEC13-215ENST00000477547 DEFB105AQ8NG35 78 aa9.08□□□□□ -0.96
SEC13-215ENST00000477547 SNCGO76070 127 aa9.07□□□□□ -0.96
SEC13-215ENST00000477547 MT1HL1P0DM35 61 aa9.07□□□□□ -0.96
SEC13-215ENST00000477547 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
SEC13-215ENST00000477547 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
SEC13-215ENST00000477547 SPRR1BP22528 89 aa9.06□□□□□ -0.96
SEC13-215ENST00000477547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
SEC13-215ENST00000477547 A0A1B0GX51 115 aa9.05□□□□□ -0.96
SEC13-215ENST00000477547 KRTAP13-2Q52LG2 175 aa9.05□□□□□ -0.96
SEC13-215ENST00000477547 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
SEC13-215ENST00000477547 LINC01547P58512 204 aaPredicted RBP9.05□□□□□ -0.96
SEC13-215ENST00000477547 C3orf22Q8N5N4 141 aa9.05□□□□□ -0.96
SEC13-215ENST00000477547 IGLV9-49A0A0B4J1Y8 123 aa9.04□□□□□ -0.96
SEC13-215ENST00000477547 H3BUT2 72 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms