RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TRAV23DV6A0A075B6W5 121 aa3.62□□□□□ -1.83
RTFDC1-206ENST00000477485 NPC2P61916 151 aa3.62□□□□□ -1.83
RTFDC1-206ENST00000477485 COMMD7Q86VX2 200 aa3.62□□□□□ -1.83
RTFDC1-206ENST00000477485 RPS10P5Q9NQ39 176 aa3.62□□□□□ -1.83
RTFDC1-206ENST00000477485 TMEM218A2RU14 115 aa3.61□□□□□ -1.83
RTFDC1-206ENST00000477485 H7C2G1 150 aa3.61□□□□□ -1.83
RTFDC1-206ENST00000477485 HINT1P49773 126 aaPredicted RBP3.61□□□□□ -1.83
RTFDC1-206ENST00000477485 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
RTFDC1-206ENST00000477485 SPANXB1Q9NS25 103 aaPredicted RBP3.61□□□□□ -1.83
RTFDC1-206ENST00000477485 TRAV12-1A0A0B4J245 112 aa3.6□□□□□ -1.83
RTFDC1-206ENST00000477485 TRBV10-2A0A0K0K1G8 114 aa3.6□□□□□ -1.83
RTFDC1-206ENST00000477485 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
RTFDC1-206ENST00000477485 SLC25A34Q6PIV7 304 aa3.6□□□□□ -1.83
RTFDC1-206ENST00000477485 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 Q1RN00 199 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 CLLU1Q5K131 121 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 Q6Q795 121 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 UQCC3Q6UW78 93 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 OR13C6PQ8NH95 151 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
RTFDC1-206ENST00000477485 LEPROTO15243 131 aa3.58□□□□□ -1.84
RTFDC1-206ENST00000477485 LGALS3P17931 250 aaKnown RBP3.58□□□□□ -1.84
RTFDC1-206ENST00000477485 RHEBQ15382 184 aa3.58□□□□□ -1.84
RTFDC1-206ENST00000477485 DEFB105AQ8NG35 78 aa3.58□□□□□ -1.84
RTFDC1-206ENST00000477485 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 HSBP1O75506 76 aa3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 HERVK_113P61574 105 aa3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 IFITM2Q01629 132 aa3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 CHCHD1Q96BP2 118 aaKnown RBP3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
RTFDC1-206ENST00000477485 J3QQQ9 107 aa3.56□□□□□ -1.84
RTFDC1-206ENST00000477485 NDUFC2O95298 119 aa3.56□□□□□ -1.84
RTFDC1-206ENST00000477485 RPL37P61927 97 aaKnown RBP3.56□□□□□ -1.84
RTFDC1-206ENST00000477485 TAL2Q16559 108 aa3.56□□□□□ -1.84
RTFDC1-206ENST00000477485 PRO1933Q9H354 126 aa3.56□□□□□ -1.84
RTFDC1-206ENST00000477485 LOC107984156A0A0G2JMH3 177 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 C5orf52A6NGY3 159 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 PLNP26678 52 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 ARL17AQ8IVW1 177 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 PMCHL2Q9BQD1 86 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 DHRS4-AS1Q9P1J3 65 aa3.55□□□□□ -1.84
RTFDC1-206ENST00000477485 SPRR1BP22528 89 aa3.54□□□□□ -1.84
RTFDC1-206ENST00000477485 COX7BP24311 80 aa3.54□□□□□ -1.84
RTFDC1-206ENST00000477485 NMUP48645 174 aa3.54□□□□□ -1.84
RTFDC1-206ENST00000477485 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
RTFDC1-206ENST00000477485 A0A0G2JQZ4 141 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 DPM2O94777 84 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 LEPROTL1O95214 131 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 AKR1D1P51857 326 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 CD164Q04900 197 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 C1orf195Q5TG92 126 aa3.53□□□□□ -1.84
RTFDC1-206ENST00000477485 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 TEX49A0A1B0GTD5 131 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 IGKCP01834 107 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 APOC3P02656 99 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 FABP4P15090 132 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 C6orf99Q4VX62 202 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 SPANXCQ9NY87 97 aa3.52□□□□□ -1.85
RTFDC1-206ENST00000477485 TCL1BO95988 128 aa3.51□□□□□ -1.85
RTFDC1-206ENST00000477485 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
RTFDC1-206ENST00000477485 C10orf91Q5T1B1 145 aa3.51□□□□□ -1.85
RTFDC1-206ENST00000477485 SMIM29Q86T20 159 aa3.51□□□□□ -1.85
RTFDC1-206ENST00000477485 SERF1AO75920 110 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 SNAPINO95295 136 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 NDUFA5Q16718 116 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 ATP11AUNQ6ZP68 121 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 SPANXDQ9BXN6 97 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 HSPB8Q9UJY1 196 aa3.5□□□□□ -1.85
RTFDC1-206ENST00000477485 CFC1P0CG37 223 aa3.49□□□□□ -1.85
RTFDC1-206ENST00000477485 SVBPQ8N300 66 aa3.49□□□□□ -1.85
RTFDC1-206ENST00000477485 FLGP20930 4061 aaPredicted RBP3.49□□□□□ -1.85
RTFDC1-206ENST00000477485 F8WEM9 126 aa3.48□□□□□ -1.85
RTFDC1-206ENST00000477485 Q5XG85 94 aa3.48□□□□□ -1.85
RTFDC1-206ENST00000477485 OBSCN-AS1Q96MR7 158 aa3.48□□□□□ -1.85
RTFDC1-206ENST00000477485 A6NDN8 102 aa3.47□□□□□ -1.85
RTFDC1-206ENST00000477485 ZNF815PA8K554 130 aa3.47□□□□□ -1.85
RTFDC1-206ENST00000477485 E9PLD3 99 aa3.47□□□□□ -1.85
RTFDC1-206ENST00000477485 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
RTFDC1-206ENST00000477485 LINC00518Q8N0U6 118 aa3.47□□□□□ -1.85
RTFDC1-206ENST00000477485 A0A1B0GWB2 263 aa3.46□□□□□ -1.86
RTFDC1-206ENST00000477485 C20orf202A1L168 122 aa3.46□□□□□ -1.86
RTFDC1-206ENST00000477485 TRGC2P03986 189 aa3.46□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP19-1Q8IUB9 90 aa3.46□□□□□ -1.86
RTFDC1-206ENST00000477485 LITAFQ99732 161 aa3.46□□□□□ -1.86
RTFDC1-206ENST00000477485 IGLV5-48A0A075B6I7 105 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 TRBV20-1A0A075B6N2 111 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 KRTAP23-1A1A580 65 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 TIMM17BO60830 172 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 SCGB1D4Q6XE38 83 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 SLC7A5P1Q8MH63 180 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 Q96NJ1 140 aa3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
RTFDC1-206ENST00000477485 TRBV7-6A0A0J9YX20 115 aa3.44□□□□□ -1.86
RTFDC1-206ENST00000477485 FAM236DA0A1B0GTK5 79 aa3.44□□□□□ -1.86
RTFDC1-206ENST00000477485 FAM236CP0DP71 79 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms