RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 C11orf86A6NJI1 115 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
BRCA1-214ENST00000477152 IFITM2Q01629 132 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 BOD1L2Q8IYS8 172 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 Q8NBF4 154 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 C18orf32Q8TCD1 76 aa4.14□□□□□ -1.75
BRCA1-214ENST00000477152 TRAV12-1A0A0B4J245 112 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 JOSD1Q15040 202 aaPredicted RBP4.13□□□□□ -1.75
BRCA1-214ENST00000477152 NDUFA5Q16718 116 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 SMCR5Q8TEV8 140 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 CHCHD1Q96BP2 118 aaKnown RBP4.13□□□□□ -1.75
BRCA1-214ENST00000477152 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 KCNQ1DNQ9H478 68 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 A0A0U1RRA0 63 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 TMEM223A0PJW6 202 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 SLC25A20O43772 301 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 COMMD7Q86VX2 200 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 MIEN1Q9BRT3 115 aa4.13□□□□□ -1.75
BRCA1-214ENST00000477152 SMIM13P0DJ93 91 aa4.12□□□□□ -1.75
BRCA1-214ENST00000477152 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
BRCA1-214ENST00000477152 IFI27L1Q96BM0 104 aa4.12□□□□□ -1.75
BRCA1-214ENST00000477152 NCR3O14931 201 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 SPRR1AP35321 89 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 HINT1P49773 126 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-214ENST00000477152 MIR7-3HGQ8N6C7 128 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 A0A096LNJ9 63 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 TRBV10-2A0A0K0K1G8 114 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 HERVK_113P61574 105 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 PMCHL1Q16048 86 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 LINC00483Q53H64 154 aa4.11□□□□□ -1.75
BRCA1-214ENST00000477152 SNAPINO95295 136 aa4.1□□□□□ -1.75
BRCA1-214ENST00000477152 DDTP30046 118 aa4.1□□□□□ -1.75
BRCA1-214ENST00000477152 KRTAP13-3Q3SY46 172 aa4.1□□□□□ -1.75
BRCA1-214ENST00000477152 S100A7L2Q5SY68 101 aa4.1□□□□□ -1.75
BRCA1-214ENST00000477152 SLC25A34Q6PIV7 304 aa4.1□□□□□ -1.75
BRCA1-214ENST00000477152 TRBV10-3A0A0K0K1G6 114 aa4.09□□□□□ -1.75
BRCA1-214ENST00000477152 HSBP1O75506 76 aa4.09□□□□□ -1.75
BRCA1-214ENST00000477152 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
BRCA1-214ENST00000477152 NMUP48645 174 aa4.09□□□□□ -1.76
BRCA1-214ENST00000477152 MOBPQ13875 183 aa4.09□□□□□ -1.76
BRCA1-214ENST00000477152 SVBPQ8N300 66 aa4.09□□□□□ -1.76
BRCA1-214ENST00000477152 SPANXB1Q9NS25 103 aaPredicted RBP4.09□□□□□ -1.76
BRCA1-214ENST00000477152 PLNP26678 52 aa4.08□□□□□ -1.76
BRCA1-214ENST00000477152 C9orf153Q5TBE3 101 aa4.08□□□□□ -1.76
BRCA1-214ENST00000477152 Q8NDZ9 215 aa4.08□□□□□ -1.76
BRCA1-214ENST00000477152 LIMD2Q9BT23 127 aa4.08□□□□□ -1.76
BRCA1-214ENST00000477152 LEPROTO15243 131 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 NDUFC2O95298 119 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 LGALS3P17931 250 aaKnown RBP4.07□□□□□ -1.76
BRCA1-214ENST00000477152 Q6ZRX8 168 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 LOC107984156A0A0G2JMH3 177 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 KRTAP4-16G5E9R7 235 aaPredicted RBP4.07□□□□□ -1.76
BRCA1-214ENST00000477152 APOC3P02656 99 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 ARL17AQ8IVW1 177 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 Q8N377 158 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 MUC2Q02817 5179 aa4.07□□□□□ -1.76
BRCA1-214ENST00000477152 HSPB8Q9UJY1 196 aa4.06□□□□□ -1.76
BRCA1-214ENST00000477152 TRAV23DV6A0A075B6W5 121 aa4.05□□□□□ -1.76
BRCA1-214ENST00000477152 H0Y8G0 127 aa4.05□□□□□ -1.76
BRCA1-214ENST00000477152 LEPROTL1O95214 131 aa4.05□□□□□ -1.76
BRCA1-214ENST00000477152 J3QQQ9 107 aa4.05□□□□□ -1.76
BRCA1-214ENST00000477152 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
BRCA1-214ENST00000477152 DPM2O94777 84 aa4.04□□□□□ -1.76
BRCA1-214ENST00000477152 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
BRCA1-214ENST00000477152 LINC00518Q8N0U6 118 aa4.04□□□□□ -1.76
BRCA1-214ENST00000477152 LAMTOR3Q9UHA4 124 aa4.04□□□□□ -1.76
BRCA1-214ENST00000477152 ZNF73O43830 326 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-214ENST00000477152 DHRS4-AS1Q9P1J3 65 aa4.03□□□□□ -1.76
BRCA1-214ENST00000477152 FAT4Q6V0I7 4981 aa4.03□□□□□ -1.76
BRCA1-214ENST00000477152 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
BRCA1-214ENST00000477152 IGKCP01834 107 aa4.03□□□□□ -1.76
BRCA1-214ENST00000477152 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
BRCA1-214ENST00000477152 Q9BRP9 147 aa4.02□□□□□ -1.77
BRCA1-214ENST00000477152 OR13C6PQ8NH95 151 aa4.02□□□□□ -1.77
BRCA1-214ENST00000477152 COPS9Q8WXC6 57 aa4.02□□□□□ -1.77
BRCA1-214ENST00000477152 CD164Q04900 197 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 SPRR1BP22528 89 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 TAL2Q16559 108 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 KRTAP2-2Q9BYT5 123 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 PRO1933Q9H354 126 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 SPANXCQ9NY87 97 aa4□□□□□ -1.77
BRCA1-214ENST00000477152 FABP4P15090 132 aa3.99□□□□□ -1.77
BRCA1-214ENST00000477152 TSPEAR-AS2P59090 65 aa3.99□□□□□ -1.77
BRCA1-214ENST00000477152 SPANXDQ9BXN6 97 aa3.99□□□□□ -1.77
BRCA1-214ENST00000477152 A0A0J9YXY3 114 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 E9PLD3 99 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 H7C2G1 150 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 TIMM17BO60830 172 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 SERF1AO75920 110 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 IGLV8-61A0A075B6I0 122 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 TRGC2P03986 189 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 COX7BP24311 80 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 NPC2P61916 151 aa3.98□□□□□ -1.77
BRCA1-214ENST00000477152 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
BRCA1-214ENST00000477152 AKR1D1P51857 326 aa3.97□□□□□ -1.77
BRCA1-214ENST00000477152 HRCT1Q6UXD1 115 aa3.97□□□□□ -1.77
BRCA1-214ENST00000477152 ST20-AS1Q8NBB2 130 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms