RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 BOD1L2Q8IYS8 172 aa8.9□□□□□ -0.98
APOBEC3F-203ENST00000476513 TSTD3H0UI37 97 aa8.89□□□□□ -0.99
APOBEC3F-203ENST00000476513 HSBP1O75506 76 aa8.89□□□□□ -0.99
APOBEC3F-203ENST00000476513 SCGB1D1O95968 90 aa8.89□□□□□ -0.99
APOBEC3F-203ENST00000476513 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
APOBEC3F-203ENST00000476513 LINC00587B1AMM8 73 aa8.88□□□□□ -0.99
APOBEC3F-203ENST00000476513 B5MCH6 92 aa8.88□□□□□ -0.99
APOBEC3F-203ENST00000476513 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
APOBEC3F-203ENST00000476513 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
APOBEC3F-203ENST00000476513 C11orf86A6NJI1 115 aa8.87□□□□□ -0.99
APOBEC3F-203ENST00000476513 FA2HQ7L5A8 372 aa8.87□□□□□ -0.99
APOBEC3F-203ENST00000476513 LINC00614P0C842 121 aa8.86□□□□□ -0.99
APOBEC3F-203ENST00000476513 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
APOBEC3F-203ENST00000476513 Q9BRP9 147 aa8.86□□□□□ -0.99
APOBEC3F-203ENST00000476513 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
APOBEC3F-203ENST00000476513 A0A096LNJ9 63 aa8.84□□□□□ -0.99
APOBEC3F-203ENST00000476513 C3orf79P0CE67 100 aa8.84□□□□□ -0.99
APOBEC3F-203ENST00000476513 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
APOBEC3F-203ENST00000476513 DDTP30046 118 aa8.83□□□□□ -1
APOBEC3F-203ENST00000476513 KRTDAPP60985 99 aa8.83□□□□□ -1
APOBEC3F-203ENST00000476513 MIR7-3HGQ8N6C7 128 aa8.83□□□□□ -1
APOBEC3F-203ENST00000476513 FLGP20930 4061 aaPredicted RBP8.82□□□□□ -1
APOBEC3F-203ENST00000476513 PMCHL1Q16048 86 aa8.82□□□□□ -1
APOBEC3F-203ENST00000476513 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
APOBEC3F-203ENST00000476513 PRO1933Q9H354 126 aa8.82□□□□□ -1
APOBEC3F-203ENST00000476513 Q6ZRX8 168 aa8.81□□□□□ -1
APOBEC3F-203ENST00000476513 LEPROTL1O95214 131 aa8.8□□□□□ -1
APOBEC3F-203ENST00000476513 VAMP8Q9BV40 100 aa8.8□□□□□ -1
APOBEC3F-203ENST00000476513 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
APOBEC3F-203ENST00000476513 C20orf202A1L168 122 aa8.79□□□□□ -1
APOBEC3F-203ENST00000476513 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
APOBEC3F-203ENST00000476513 PET117Q6UWS5 81 aa8.79□□□□□ -1
APOBEC3F-203ENST00000476513 LIMD2Q9BT23 127 aa8.78□□□□□ -1
APOBEC3F-203ENST00000476513 TMEM223A0PJW6 202 aa8.77□□□□□ -1.01
APOBEC3F-203ENST00000476513 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
APOBEC3F-203ENST00000476513 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
APOBEC3F-203ENST00000476513 C14orf144Q96I85 54 aa8.77□□□□□ -1.01
APOBEC3F-203ENST00000476513 MAP1LC3CQ9BXW4 147 aa8.77□□□□□ -1.01
APOBEC3F-203ENST00000476513 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
APOBEC3F-203ENST00000476513 HBDP02042 147 aa8.76□□□□□ -1.01
APOBEC3F-203ENST00000476513 HRCT1Q6UXD1 115 aa8.76□□□□□ -1.01
APOBEC3F-203ENST00000476513 MIEN1Q9BRT3 115 aa8.76□□□□□ -1.01
APOBEC3F-203ENST00000476513 ST20-AS1Q8NBB2 130 aa8.75□□□□□ -1.01
APOBEC3F-203ENST00000476513 HERV-K104P63124 156 aa8.74□□□□□ -1.01
APOBEC3F-203ENST00000476513 SPATA45Q537H7 98 aa8.74□□□□□ -1.01
APOBEC3F-203ENST00000476513 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
APOBEC3F-203ENST00000476513 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
APOBEC3F-203ENST00000476513 USH2AO75445 5202 aa8.74□□□□□ -1.01
APOBEC3F-203ENST00000476513 LINC01545Q5VT33 79 aa8.73□□□□□ -1.01
APOBEC3F-203ENST00000476513 TRBV10-2A0A0K0K1G8 114 aa8.72□□□□□ -1.01
APOBEC3F-203ENST00000476513 UQCR10Q9UDW1 63 aa8.72□□□□□ -1.01
APOBEC3F-203ENST00000476513 LOC107984156A0A0G2JMH3 177 aa8.71□□□□□ -1.02
APOBEC3F-203ENST00000476513 ARL17AQ8IVW1 177 aa8.71□□□□□ -1.02
APOBEC3F-203ENST00000476513 RPL37P61927 97 aaKnown RBP8.7□□□□□ -1.02
APOBEC3F-203ENST00000476513 M0R143 59 aa8.68□□□□□ -1.02
APOBEC3F-203ENST00000476513 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
APOBEC3F-203ENST00000476513 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
APOBEC3F-203ENST00000476513 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
APOBEC3F-203ENST00000476513 HSBP1L1C9JCN9 74 aa8.67□□□□□ -1.02
APOBEC3F-203ENST00000476513 ATOH7Q8N100 152 aa8.67□□□□□ -1.02
APOBEC3F-203ENST00000476513 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
APOBEC3F-203ENST00000476513 SPRR1BP22528 89 aa8.66□□□□□ -1.02
APOBEC3F-203ENST00000476513 S100A7L2Q5SY68 101 aa8.66□□□□□ -1.02
APOBEC3F-203ENST00000476513 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
APOBEC3F-203ENST00000476513 ZNF73O43830 326 aaPredicted RBP8.65□□□□□ -1.02
APOBEC3F-203ENST00000476513 SNHG12Q9BXW3 62 aa8.65□□□□□ -1.02
APOBEC3F-203ENST00000476513 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
APOBEC3F-203ENST00000476513 FCGBPQ9Y6R7 5405 aaPredicted RBP8.64□□□□□ -1.03
APOBEC3F-203ENST00000476513 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
APOBEC3F-203ENST00000476513 CFC1P0CG37 223 aa8.62□□□□□ -1.03
APOBEC3F-203ENST00000476513 CD164Q04900 197 aa8.62□□□□□ -1.03
APOBEC3F-203ENST00000476513 C1orf195Q5TG92 126 aa8.62□□□□□ -1.03
APOBEC3F-203ENST00000476513 H0Y8G0 127 aa8.61□□□□□ -1.03
APOBEC3F-203ENST00000476513 H7C2G1 150 aa8.61□□□□□ -1.03
APOBEC3F-203ENST00000476513 NDUFC2O95298 119 aa8.61□□□□□ -1.03
APOBEC3F-203ENST00000476513 TSPEAR-AS2P59090 65 aa8.61□□□□□ -1.03
APOBEC3F-203ENST00000476513 LAMTOR3Q9UHA4 124 aa8.61□□□□□ -1.03
APOBEC3F-203ENST00000476513 COX8AP10176 69 aa8.6□□□□□ -1.03
APOBEC3F-203ENST00000476513 KRTAP9-8Q9BYQ0 159 aa8.6□□□□□ -1.03
APOBEC3F-203ENST00000476513 Q5XG85 94 aa8.59□□□□□ -1.03
APOBEC3F-203ENST00000476513 Q6Q795 121 aa8.59□□□□□ -1.03
APOBEC3F-203ENST00000476513 DLEU1O43261 78 aa8.58□□□□□ -1.04
APOBEC3F-203ENST00000476513 DPM2O94777 84 aa8.57□□□□□ -1.04
APOBEC3F-203ENST00000476513 IGKCP01834 107 aa8.57□□□□□ -1.04
APOBEC3F-203ENST00000476513 HINT1P49773 126 aaPredicted RBP8.57□□□□□ -1.04
APOBEC3F-203ENST00000476513 EIF4EBP3O60516 100 aaPredicted RBP8.56□□□□□ -1.04
APOBEC3F-203ENST00000476513 ANKRD39Q53RE8 183 aa8.56□□□□□ -1.04
APOBEC3F-203ENST00000476513 COL5A1-AS1Q5SY13 56 aa8.56□□□□□ -1.04
APOBEC3F-203ENST00000476513 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
APOBEC3F-203ENST00000476513 A0A1B0GV90 55 aa8.55□□□□□ -1.04
APOBEC3F-203ENST00000476513 LEPROTO15243 131 aa8.55□□□□□ -1.04
APOBEC3F-203ENST00000476513 Q1RN00 199 aa8.55□□□□□ -1.04
APOBEC3F-203ENST00000476513 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
APOBEC3F-203ENST00000476513 PLNP26678 52 aa8.54□□□□□ -1.04
APOBEC3F-203ENST00000476513 SYNE2Q8WXH0 6885 aaKnown RBP8.53□□□□□ -1.04
APOBEC3F-203ENST00000476513 NPC2P61916 151 aa8.53□□□□□ -1.04
APOBEC3F-203ENST00000476513 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
APOBEC3F-203ENST00000476513 MACF1Q9UPN3 7388 aaKnown RBP8.52□□□□□ -1.05
APOBEC3F-203ENST00000476513 C2orf91Q6ZV80 131 aa8.52□□□□□ -1.05
APOBEC3F-203ENST00000476513 KRTAP19-1Q8IUB9 90 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms