RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CMC4P56277 68 aaPredicted RBP3.41□□□□□ -1.86
CCDC39-204ENST00000476379 C11orf45Q8TAV5 145 aa3.41□□□□□ -1.86
CCDC39-204ENST00000476379 ZNF73O43830 326 aaPredicted RBP3.4□□□□□ -1.86
CCDC39-204ENST00000476379 IL17DQ8TAD2 202 aa3.4□□□□□ -1.86
CCDC39-204ENST00000476379 TRAV10A0A0B4J240 114 aa3.4□□□□□ -1.86
CCDC39-204ENST00000476379 TIMM17BO60830 172 aa3.4□□□□□ -1.87
CCDC39-204ENST00000476379 FAM168BA1KXE4 195 aa3.4□□□□□ -1.87
CCDC39-204ENST00000476379 PRLHP81277 87 aa3.4□□□□□ -1.87
CCDC39-204ENST00000476379 SBSPONQ8IVN8 264 aa3.4□□□□□ -1.87
CCDC39-204ENST00000476379 LYSTQ99698 3801 aa3.4□□□□□ -1.87
CCDC39-204ENST00000476379 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
CCDC39-204ENST00000476379 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 PRO0628Q9UI54 55 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 ZNF706Q9Y5V0 76 aaPredicted RBP3.39□□□□□ -1.87
CCDC39-204ENST00000476379 X6R8D5 127 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 Q8NDZ9 215 aa3.39□□□□□ -1.87
CCDC39-204ENST00000476379 DMBT1Q9UGM3 2413 aaPredicted RBP3.39□□□□□ -1.87
CCDC39-204ENST00000476379 Q8IZM0 81 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 ST20-AS1Q8NBB2 130 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 LINC00575Q6W349 94 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 C6orf48Q9UBA6 75 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 H0Y9J4 135 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 SYCNQ0VAF6 134 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 Q6ZVQ6 151 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 LINC01561Q8N1V8 128 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
CCDC39-204ENST00000476379 TM2D3Q9BRN9 247 aa3.37□□□□□ -1.87
CCDC39-204ENST00000476379 IGLV5-45A0A087WSX0 123 aa3.37□□□□□ -1.87
CCDC39-204ENST00000476379 Q6JHZ5 121 aa3.37□□□□□ -1.87
CCDC39-204ENST00000476379 LYPD5Q6UWN5 251 aa3.37□□□□□ -1.87
CCDC39-204ENST00000476379 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
CCDC39-204ENST00000476379 ESRGQ1W209 222 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 PSPHP1O15172 72 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 RETNLBQ9BQ08 111 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 IGLV9-49A0A0B4J1Y8 123 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 LELP1Q5T871 98 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 MIFP14174 115 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 CSNK1G2-AS1Q8NCQ2 148 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 C19orf73Q9NVV2 129 aa3.36□□□□□ -1.87
CCDC39-204ENST00000476379 K7EIL1 84 aa3.35□□□□□ -1.87
CCDC39-204ENST00000476379 K7ERS5 55 aa3.35□□□□□ -1.87
CCDC39-204ENST00000476379 LINC00474Q9P2X8 69 aa3.35□□□□□ -1.87
CCDC39-204ENST00000476379 RPL37AP61513 92 aaKnown RBP3.35□□□□□ -1.87
CCDC39-204ENST00000476379 MUC7Q8TAX7 377 aa3.35□□□□□ -1.87
CCDC39-204ENST00000476379 TRBV7-7A0A0K0K1E9 115 aa3.35□□□□□ -1.87
CCDC39-204ENST00000476379 UBE2AP49459 152 aa3.34□□□□□ -1.87
CCDC39-204ENST00000476379 KIAA0087Q14695 138 aa3.34□□□□□ -1.87
CCDC39-204ENST00000476379 Q6ZRP5 223 aa3.34□□□□□ -1.87
CCDC39-204ENST00000476379 A0A087WSZ3 146 aa3.34□□□□□ -1.88
CCDC39-204ENST00000476379 C16orf95Q9H693 158 aa3.34□□□□□ -1.88
CCDC39-204ENST00000476379 SMIM29Q86T20 159 aa3.33□□□□□ -1.88
CCDC39-204ENST00000476379 PCOTHQ58A44 107 aa3.33□□□□□ -1.88
CCDC39-204ENST00000476379 CD164Q04900 197 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 C1orf137Q5JT78 98 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 C7orf33Q8WU49 177 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 KLK9Q2XQG4 91 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 IMUPQ9GZP8 106 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 A0A1B0GUV1 79 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 Q8NAQ8 132 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 M0R378 163 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 C22orf24Q9Y442 160 aa3.32□□□□□ -1.88
CCDC39-204ENST00000476379 A0A0A0MQY5 61 aa3.31□□□□□ -1.88
CCDC39-204ENST00000476379 FAM19A3Q7Z5A8 133 aa3.31□□□□□ -1.88
CCDC39-204ENST00000476379 LINC00208Q96KT6 92 aa3.31□□□□□ -1.88
CCDC39-204ENST00000476379 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
CCDC39-204ENST00000476379 Q6ZQT0 140 aa3.31□□□□□ -1.88
CCDC39-204ENST00000476379 MP68P56378 58 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 TMEM254Q8TBM7 123 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 CDK2AP2O75956 126 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 IGKV4-1P06312 121 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 CHKB-CPT1BH3BT56 60 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 ERC2-IT1O76042 136 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 DNAH10OSP0CZ25 163 aa3.3□□□□□ -1.88
CCDC39-204ENST00000476379 FAM229AH3BQW9 127 aa3.29□□□□□ -1.88
CCDC39-204ENST00000476379 PHF5AQ7RTV0 110 aaKnown RBP3.29□□□□□ -1.88
CCDC39-204ENST00000476379 COX17Q14061 63 aa3.29□□□□□ -1.88
CCDC39-204ENST00000476379 TRBV7-6A0A0J9YX20 115 aa3.28□□□□□ -1.88
CCDC39-204ENST00000476379 LY6G6CO95867 125 aa3.28□□□□□ -1.88
CCDC39-204ENST00000476379 EGFEM1PQ0D2K5 195 aa3.28□□□□□ -1.88
CCDC39-204ENST00000476379 K7EQZ3 153 aa3.28□□□□□ -1.88
CCDC39-204ENST00000476379 TRAV7A0A075B6U4 112 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 OXTP01178 125 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 CRYGAP11844 174 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 C2orf48Q96LS8 159 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 LINC00588Q9Y4M8 146 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 LINC00336Q6ZUF6 198 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 C15orf56Q8N910 161 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 CMYA5Q8N3K9 4069 aa3.27□□□□□ -1.89
CCDC39-204ENST00000476379 IGHV6-1A0A0B4J1U7 121 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 PRYO14603 147 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 REG3GQ6UW15 175 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 CASC2Q6XLA1 102 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 OBSCN-AS1Q96MR7 158 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 Q9BRP9 147 aa3.26□□□□□ -1.89
CCDC39-204ENST00000476379 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms