RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 TRAV13-2A0A0B4J235 113 aa13.49□□□□□ -0.25
MCF2L2-209ENST00000475664 HSD52Q0P140 79 aa13.49□□□□□ -0.25
MCF2L2-209ENST00000475664 FAM19A1Q7Z5A9 133 aa13.49□□□□□ -0.25
MCF2L2-209ENST00000475664 CBY1Q9Y3M2 126 aa13.49□□□□□ -0.25
MCF2L2-209ENST00000475664 A6NDN8 102 aa13.48□□□□□ -0.25
MCF2L2-209ENST00000475664 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
MCF2L2-209ENST00000475664 UBE2AP49459 152 aa13.48□□□□□ -0.25
MCF2L2-209ENST00000475664 PRLHP81277 87 aa13.48□□□□□ -0.25
MCF2L2-209ENST00000475664 ETDCA0A1B0GVM5 59 aa13.45□□□□□ -0.26
MCF2L2-209ENST00000475664 ZNF73O43830 326 aaPredicted RBP13.45□□□□□ -0.26
MCF2L2-209ENST00000475664 DIRC1Q969H9 104 aa13.45□□□□□ -0.26
MCF2L2-209ENST00000475664 FLG2Q5D862 2391 aaPredicted RBP13.44□□□□□ -0.26
MCF2L2-209ENST00000475664 H0Y9J4 135 aa13.44□□□□□ -0.26
MCF2L2-209ENST00000475664 FXYD2P54710 66 aa13.44□□□□□ -0.26
MCF2L2-209ENST00000475664 B5MCH6 92 aa13.42□□□□□ -0.26
MCF2L2-209ENST00000475664 CFC1BP0CG36 223 aa13.42□□□□□ -0.26
MCF2L2-209ENST00000475664 CFC1P0CG37 223 aa13.42□□□□□ -0.26
MCF2L2-209ENST00000475664 TMEM238LA0A1B0GVL6 79 aa13.41□□□□□ -0.26
MCF2L2-209ENST00000475664 A6NJY4 79 aa13.41□□□□□ -0.26
MCF2L2-209ENST00000475664 TSTD3H0UI37 97 aa13.41□□□□□ -0.26
MCF2L2-209ENST00000475664 A0A0B4J2C4 111 aa13.4□□□□□ -0.26
MCF2L2-209ENST00000475664 PCLOQ9Y6V0 5065 aa13.4□□□□□ -0.27
MCF2L2-209ENST00000475664 RPL13AP40429 203 aaKnown RBP13.39□□□□□ -0.27
MCF2L2-209ENST00000475664 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
MCF2L2-209ENST00000475664 Q6ZRX8 168 aa13.39□□□□□ -0.27
MCF2L2-209ENST00000475664 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
MCF2L2-209ENST00000475664 RAB37Q96AX2 223 aa13.37□□□□□ -0.27
MCF2L2-209ENST00000475664 HIGD2AQ9BW72 106 aa13.37□□□□□ -0.27
MCF2L2-209ENST00000475664 MYCBP2O75592 4640 aa13.37□□□□□ -0.27
MCF2L2-209ENST00000475664 FAT3Q8TDW7 4589 aa13.36□□□□□ -0.27
MCF2L2-209ENST00000475664 HINT1P49773 126 aaPredicted RBP13.36□□□□□ -0.27
MCF2L2-209ENST00000475664 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
MCF2L2-209ENST00000475664 TRBV7-6A0A0J9YX20 115 aa13.34□□□□□ -0.27
MCF2L2-209ENST00000475664 CTAG1AP78358 180 aa13.34□□□□□ -0.27
MCF2L2-209ENST00000475664 Q9BRP9 147 aa13.34□□□□□ -0.27
MCF2L2-209ENST00000475664 LRP1Q07954 4544 aaKnown RBP13.34□□□□□ -0.27
MCF2L2-209ENST00000475664 ELOF1P60002 83 aaKnown RBP13.33□□□□□ -0.28
MCF2L2-209ENST00000475664 BVES-AS1Q5T3Y7 98 aa13.33□□□□□ -0.28
MCF2L2-209ENST00000475664 COX7BP24311 80 aa13.32□□□□□ -0.28
MCF2L2-209ENST00000475664 NHP2Q9NX24 153 aaKnown RBP13.32□□□□□ -0.28
MCF2L2-209ENST00000475664 A0A1B0GWB2 263 aa13.31□□□□□ -0.28
MCF2L2-209ENST00000475664 KRTAP1-4P0C5Y4 121 aa13.31□□□□□ -0.28
MCF2L2-209ENST00000475664 PRO1854Q9UHT4 67 aa13.31□□□□□ -0.28
MCF2L2-209ENST00000475664 H7C2G1 150 aa13.29□□□□□ -0.28
MCF2L2-209ENST00000475664 OXTP01178 125 aa13.29□□□□□ -0.28
MCF2L2-209ENST00000475664 KRTAP29-1A8MX34 341 aaPredicted RBP13.28□□□□□ -0.28
MCF2L2-209ENST00000475664 K7ERJ3 54 aa13.28□□□□□ -0.28
MCF2L2-209ENST00000475664 ERC2-IT1O76042 136 aa13.28□□□□□ -0.28
MCF2L2-209ENST00000475664 M0R143 59 aa13.27□□□□□ -0.29
MCF2L2-209ENST00000475664 LINC01600Q96MT4 127 aa13.27□□□□□ -0.29
MCF2L2-209ENST00000475664 DHRS4-AS1Q9P1J3 65 aa13.26□□□□□ -0.29
MCF2L2-209ENST00000475664 SPRR4Q96PI1 79 aa13.25□□□□□ -0.29
MCF2L2-209ENST00000475664 VAMP3Q15836 100 aa13.23□□□□□ -0.29
MCF2L2-209ENST00000475664 Q1RN00 199 aa13.23□□□□□ -0.29
MCF2L2-209ENST00000475664 ZNF706Q9Y5V0 76 aaPredicted RBP13.23□□□□□ -0.29
MCF2L2-209ENST00000475664 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
MCF2L2-209ENST00000475664 MT1HL1P0DM35 61 aa13.19□□□□□ -0.3
MCF2L2-209ENST00000475664 FAM229BQ4G0N7 80 aa13.18□□□□□ -0.3
MCF2L2-209ENST00000475664 LINC00575Q6W349 94 aa13.18□□□□□ -0.3
MCF2L2-209ENST00000475664 PRR26Q8N8Z3 221 aa13.18□□□□□ -0.3
MCF2L2-209ENST00000475664 ST20-AS1Q8NBB2 130 aa13.18□□□□□ -0.3
MCF2L2-209ENST00000475664 TSPAN13O95857 204 aa13.17□□□□□ -0.3
MCF2L2-209ENST00000475664 A0A087X002 238 aa13.16□□□□□ -0.3
MCF2L2-209ENST00000475664 KRTAP10-8P60410 259 aa13.16□□□□□ -0.3
MCF2L2-209ENST00000475664 LINC00483Q53H64 154 aa13.16□□□□□ -0.3
MCF2L2-209ENST00000475664 TRIAP1O43715 76 aa13.15□□□□□ -0.3
MCF2L2-209ENST00000475664 GAGE2AQ6NT46 116 aa13.15□□□□□ -0.3
MCF2L2-209ENST00000475664 TNXBP22105 4242 aa13.15□□□□□ -0.31
MCF2L2-209ENST00000475664 J3QL48 77 aa13.14□□□□□ -0.31
MCF2L2-209ENST00000475664 CRYGAP11844 174 aa13.14□□□□□ -0.31
MCF2L2-209ENST00000475664 H0YGX0 51 aa13.13□□□□□ -0.31
MCF2L2-209ENST00000475664 SLC25A20O43772 301 aa13.13□□□□□ -0.31
MCF2L2-209ENST00000475664 hADV29S1A0JD25 119 aa13.11□□□□□ -0.31
MCF2L2-209ENST00000475664 BATFQ16520 125 aa13.11□□□□□ -0.31
MCF2L2-209ENST00000475664 PSMB2P49721 201 aa13.1□□□□□ -0.31
MCF2L2-209ENST00000475664 KRTAP13-2Q52LG2 175 aa13.1□□□□□ -0.31
MCF2L2-209ENST00000475664 SPRR1BP22528 89 aa13.09□□□□□ -0.31
MCF2L2-209ENST00000475664 FAM218AQ96MZ4 157 aa13.09□□□□□ -0.31
MCF2L2-209ENST00000475664 DMBT1Q9UGM3 2413 aaPredicted RBP13.08□□□□□ -0.32
MCF2L2-209ENST00000475664 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
MCF2L2-209ENST00000475664 LINC01547P58512 204 aaPredicted RBP13.07□□□□□ -0.32
MCF2L2-209ENST00000475664 COX6CP09669 75 aa13.05□□□□□ -0.32
MCF2L2-209ENST00000475664 Q6ZQY7 126 aa13.05□□□□□ -0.32
MCF2L2-209ENST00000475664 C3orf22Q8N5N4 141 aa13.05□□□□□ -0.32
MCF2L2-209ENST00000475664 DEFB105AQ8NG35 78 aa13.05□□□□□ -0.32
MCF2L2-209ENST00000475664 TEX49A0A1B0GTD5 131 aa13.04□□□□□ -0.32
MCF2L2-209ENST00000475664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.04□□□□□ -0.32
MCF2L2-209ENST00000475664 TYMSOSQ8TAI1 123 aa13.04□□□□□ -0.32
MCF2L2-209ENST00000475664 CLEC2BQ92478 149 aa13.04□□□□□ -0.32
MCF2L2-209ENST00000475664 A0A1B0GX51 115 aa13.03□□□□□ -0.32
MCF2L2-209ENST00000475664 SNHG12Q9BXW3 62 aa13.02□□□□□ -0.33
MCF2L2-209ENST00000475664 Q8N377 158 aa13.01□□□□□ -0.33
MCF2L2-209ENST00000475664 PCP4L1A6NKN8 68 aa13□□□□□ -0.33
MCF2L2-209ENST00000475664 SNCGO76070 127 aa13□□□□□ -0.33
MCF2L2-209ENST00000475664 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
MCF2L2-209ENST00000475664 IGLV9-49A0A0B4J1Y8 123 aa12.98□□□□□ -0.33
MCF2L2-209ENST00000475664 SCGB1C2P0DMR2 95 aa12.98□□□□□ -0.33
MCF2L2-209ENST00000475664 SMIM29Q86T20 159 aa12.98□□□□□ -0.33
MCF2L2-209ENST00000475664 LAMTOR3Q9UHA4 124 aa12.97□□□□□ -0.33
MCF2L2-209ENST00000475664 MOBPQ13875 183 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms