RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 NKAPP1Q8N9T2 125 aa9.86□□□□□ -0.83
CPSF3-203ENST00000475482 M0R378 163 aa9.85□□□□□ -0.83
CPSF3-203ENST00000475482 RPL37AP61513 92 aaKnown RBP9.85□□□□□ -0.83
CPSF3-203ENST00000475482 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
CPSF3-203ENST00000475482 A0A087WYN8 130 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 A0A1W2PPM0 123 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 NCR3O14931 201 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 VPREB1P12018 145 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 PLAC8Q9NZF1 115 aa9.84□□□□□ -0.83
CPSF3-203ENST00000475482 J3QL48 77 aa9.83□□□□□ -0.84
CPSF3-203ENST00000475482 SCGB1C2P0DMR2 95 aa9.83□□□□□ -0.84
CPSF3-203ENST00000475482 VAMP3Q15836 100 aa9.83□□□□□ -0.84
CPSF3-203ENST00000475482 IGLV5-37A0A075B6J1 123 aa9.82□□□□□ -0.84
CPSF3-203ENST00000475482 A0A096LNI7 61 aa9.82□□□□□ -0.84
CPSF3-203ENST00000475482 A0A1B0GV90 55 aa9.82□□□□□ -0.84
CPSF3-203ENST00000475482 OXTP01178 125 aa9.82□□□□□ -0.84
CPSF3-203ENST00000475482 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
CPSF3-203ENST00000475482 IGKV2-24A0A0C4DH68 120 aa9.81□□□□□ -0.84
CPSF3-203ENST00000475482 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
CPSF3-203ENST00000475482 NAA38Q9BRA0 125 aaKnown RBP9.81□□□□□ -0.84
CPSF3-203ENST00000475482 GTF2H5Q6ZYL4 71 aa9.8□□□□□ -0.84
CPSF3-203ENST00000475482 Q8NDZ9 215 aa9.8□□□□□ -0.84
CPSF3-203ENST00000475482 TRBV20-1A0A075B6N2 111 aa9.79□□□□□ -0.84
CPSF3-203ENST00000475482 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
CPSF3-203ENST00000475482 TRIAP1O43715 76 aa9.78□□□□□ -0.84
CPSF3-203ENST00000475482 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
CPSF3-203ENST00000475482 SPCS1Q9Y6A9 102 aa9.78□□□□□ -0.84
CPSF3-203ENST00000475482 GAGE10A6NGK3 116 aa9.77□□□□□ -0.85
CPSF3-203ENST00000475482 SERTAD4-AS1Q5TG53 156 aa9.77□□□□□ -0.85
CPSF3-203ENST00000475482 FAM19A5Q7Z5A7 132 aaPredicted RBP9.77□□□□□ -0.85
CPSF3-203ENST00000475482 DPH3Q96FX2 82 aa9.77□□□□□ -0.85
CPSF3-203ENST00000475482 TRBV10-3A0A0K0K1G6 114 aa9.76□□□□□ -0.85
CPSF3-203ENST00000475482 H0YGX0 51 aa9.76□□□□□ -0.85
CPSF3-203ENST00000475482 C22orf24Q9Y442 160 aa9.76□□□□□ -0.85
CPSF3-203ENST00000475482 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
CPSF3-203ENST00000475482 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
CPSF3-203ENST00000475482 FAM168BA1KXE4 195 aa9.74□□□□□ -0.85
CPSF3-203ENST00000475482 K7EP34 96 aa9.74□□□□□ -0.85
CPSF3-203ENST00000475482 C7orf33Q8WU49 177 aa9.74□□□□□ -0.85
CPSF3-203ENST00000475482 M0QXV9 152 aa9.73□□□□□ -0.85
CPSF3-203ENST00000475482 SNCGO76070 127 aa9.73□□□□□ -0.85
CPSF3-203ENST00000475482 ATXN8Q156A1 80 aa9.73□□□□□ -0.85
CPSF3-203ENST00000475482 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
CPSF3-203ENST00000475482 TRBV7-6A0A0J9YX20 115 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 PRYO14603 147 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.86
CPSF3-203ENST00000475482 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 C6orf99Q4VX62 202 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 LINC00167Q96N53 147 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 KCNQ1DNQ9H478 68 aa9.71□□□□□ -0.86
CPSF3-203ENST00000475482 IGLV1-50A0A075B6I6 118 aa9.7□□□□□ -0.86
CPSF3-203ENST00000475482 A0A1W2PNN7 141 aa9.7□□□□□ -0.86
CPSF3-203ENST00000475482 TCL1BO95988 128 aa9.69□□□□□ -0.86
CPSF3-203ENST00000475482 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
CPSF3-203ENST00000475482 KRTAP7-1Q8IUC3 87 aa9.69□□□□□ -0.86
CPSF3-203ENST00000475482 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
CPSF3-203ENST00000475482 A0A1B0GX51 115 aa9.68□□□□□ -0.86
CPSF3-203ENST00000475482 RPL37AP8A6NKH3 93 aa9.67□□□□□ -0.86
CPSF3-203ENST00000475482 LST1O00453 97 aa9.67□□□□□ -0.86
CPSF3-203ENST00000475482 UBE2BP63146 152 aa9.67□□□□□ -0.86
CPSF3-203ENST00000475482 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
CPSF3-203ENST00000475482 H3BMG7 143 aa9.66□□□□□ -0.86
CPSF3-203ENST00000475482 SLC25A20O43772 301 aa9.66□□□□□ -0.86
CPSF3-203ENST00000475482 TRACP01848 142 aa9.66□□□□□ -0.86
CPSF3-203ENST00000475482 COX7BP24311 80 aa9.66□□□□□ -0.86
CPSF3-203ENST00000475482 DNAL4O96015 105 aa9.65□□□□□ -0.86
CPSF3-203ENST00000475482 ELOF1P60002 83 aaKnown RBP9.64□□□□□ -0.87
CPSF3-203ENST00000475482 REG3GQ6UW15 175 aa9.64□□□□□ -0.87
CPSF3-203ENST00000475482 TNXBP22105 4242 aa9.63□□□□□ -0.87
CPSF3-203ENST00000475482 ETDCA0A1B0GVM5 59 aa9.63□□□□□ -0.87
CPSF3-203ENST00000475482 PHF5AQ7RTV0 110 aaKnown RBP9.63□□□□□ -0.87
CPSF3-203ENST00000475482 F8W1H4 67 aa9.62□□□□□ -0.87
CPSF3-203ENST00000475482 SPRR1AP35321 89 aa9.62□□□□□ -0.87
CPSF3-203ENST00000475482 GHRHP01286 108 aa9.61□□□□□ -0.87
CPSF3-203ENST00000475482 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
CPSF3-203ENST00000475482 hADV29S1A0JD25 119 aa9.6□□□□□ -0.87
CPSF3-203ENST00000475482 C9JAW5 83 aa9.6□□□□□ -0.87
CPSF3-203ENST00000475482 FAM218AQ96MZ4 157 aa9.6□□□□□ -0.87
CPSF3-203ENST00000475482 SPINK6Q6UWN8 80 aa9.59□□□□□ -0.87
CPSF3-203ENST00000475482 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
CPSF3-203ENST00000475482 DHRS4-AS1Q9P1J3 65 aa9.59□□□□□ -0.87
CPSF3-203ENST00000475482 H3BQ85 93 aa9.58□□□□□ -0.88
CPSF3-203ENST00000475482 Q6ZRX8 168 aa9.58□□□□□ -0.88
CPSF3-203ENST00000475482 B5MCH6 92 aa9.57□□□□□ -0.88
CPSF3-203ENST00000475482 KRTAP4-16G5E9R7 235 aaPredicted RBP9.57□□□□□ -0.88
CPSF3-203ENST00000475482 H3BT86 120 aa9.57□□□□□ -0.88
CPSF3-203ENST00000475482 OCIAD2Q56VL3 154 aa9.56□□□□□ -0.88
CPSF3-203ENST00000475482 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
CPSF3-203ENST00000475482 ORMDL1Q9P0S3 153 aa9.55□□□□□ -0.88
CPSF3-203ENST00000475482 H0Y9J4 135 aa9.54□□□□□ -0.88
CPSF3-203ENST00000475482 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.54□□□□□ -0.88
CPSF3-203ENST00000475482 ANKRD29Q8N6D5 301 aa9.54□□□□□ -0.88
CPSF3-203ENST00000475482 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
CPSF3-203ENST00000475482 BCE1O60756 84 aa9.53□□□□□ -0.88
CPSF3-203ENST00000475482 PRO0461Q9UI25 63 aa9.53□□□□□ -0.88
CPSF3-203ENST00000475482 BAALC-AS2P0C853 105 aa9.52□□□□□ -0.89
CPSF3-203ENST00000475482 UBE2AP49459 152 aa9.52□□□□□ -0.89
CPSF3-203ENST00000475482 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
CPSF3-203ENST00000475482 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms