RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 Q6ZQY7 126 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 RETNQ9HD89 108 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 Q8N9L7 120 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 KLK12Q9UKR0 248 aa8.69□□□□□ -1.02
CCNL1-216ENST00000475298 F8P00451 2351 aa8.68□□□□□ -1.02
CCNL1-216ENST00000475298 HIGD2AQ9BW72 106 aa8.68□□□□□ -1.02
CCNL1-216ENST00000475298 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 LELP1Q5T871 98 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 UNQ6190/PRO20217Q6UXQ8 127 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 Q6ZRP5 223 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 ANK2Q01484 3957 aa8.67□□□□□ -1.02
CCNL1-216ENST00000475298 TENM3Q9P273 2699 aa8.66□□□□□ -1.02
CCNL1-216ENST00000475298 STAB1Q9NY15 2570 aa8.65□□□□□ -1.02
CCNL1-216ENST00000475298 SPAG11BQ08648 103 aa8.65□□□□□ -1.02
CCNL1-216ENST00000475298 COX17Q14061 63 aa8.65□□□□□ -1.02
CCNL1-216ENST00000475298 Q1T7F1 81 aa8.65□□□□□ -1.02
CCNL1-216ENST00000475298 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
CCNL1-216ENST00000475298 KRTAP10-11P60412 298 aa8.64□□□□□ -1.03
CCNL1-216ENST00000475298 FBN1P35555 2871 aaKnown RBP8.64□□□□□ -1.03
CCNL1-216ENST00000475298 PRR34Q9NV39 138 aa8.63□□□□□ -1.03
CCNL1-216ENST00000475298 IGLV6-57P01721 117 aa8.62□□□□□ -1.03
CCNL1-216ENST00000475298 WFDC10BQ8IUB3 73 aa8.62□□□□□ -1.03
CCNL1-216ENST00000475298 H3BQ85 93 aa8.61□□□□□ -1.03
CCNL1-216ENST00000475298 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
CCNL1-216ENST00000475298 KPRPQ5T749 579 aaPredicted RBP8.59□□□□□ -1.03
CCNL1-216ENST00000475298 COX7BP24311 80 aa8.58□□□□□ -1.04
CCNL1-216ENST00000475298 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.58□□□□□ -1.04
CCNL1-216ENST00000475298 PSPHP1O15172 72 aa8.58□□□□□ -1.04
CCNL1-216ENST00000475298 CD164Q04900 197 aa8.58□□□□□ -1.04
CCNL1-216ENST00000475298 CMYA5Q8N3K9 4069 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 XAGE1AQ9HD64 81 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 NOTCH1P46531 2555 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 A0A0J9YWU9 116 aa8.57□□□□□ -1.04
CCNL1-216ENST00000475298 TRAV22A0A0B4J277 110 aa8.56□□□□□ -1.04
CCNL1-216ENST00000475298 LCE6AA0A183 80 aa8.56□□□□□ -1.04
CCNL1-216ENST00000475298 KRTAP24-1Q3LI83 254 aa8.56□□□□□ -1.04
CCNL1-216ENST00000475298 A8MU10 97 aa8.55□□□□□ -1.04
CCNL1-216ENST00000475298 FAM30AQ9NZY2 134 aa8.54□□□□□ -1.04
CCNL1-216ENST00000475298 SMIM29Q86T20 159 aa8.53□□□□□ -1.04
CCNL1-216ENST00000475298 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
CCNL1-216ENST00000475298 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
CCNL1-216ENST00000475298 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
CCNL1-216ENST00000475298 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
CCNL1-216ENST00000475298 ELOF1P60002 83 aaKnown RBP8.51□□□□□ -1.05
CCNL1-216ENST00000475298 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
CCNL1-216ENST00000475298 ZNF73O43830 326 aaPredicted RBP8.5□□□□□ -1.05
CCNL1-216ENST00000475298 EGFEM1PQ0D2K5 195 aa8.5□□□□□ -1.05
CCNL1-216ENST00000475298 H3BNG1 76 aa8.5□□□□□ -1.05
CCNL1-216ENST00000475298 C15orf56Q8N910 161 aa8.49□□□□□ -1.05
CCNL1-216ENST00000475298 A8MUN3 132 aa8.49□□□□□ -1.05
CCNL1-216ENST00000475298 C3orf84H3BNL1 204 aa8.49□□□□□ -1.05
CCNL1-216ENST00000475298 SYCNQ0VAF6 134 aa8.49□□□□□ -1.05
CCNL1-216ENST00000475298 DEFB131BA0A096LNP1 70 aa8.48□□□□□ -1.05
CCNL1-216ENST00000475298 PSCAO43653 123 aa8.48□□□□□ -1.05
CCNL1-216ENST00000475298 PRB2P02812 416 aaPredicted RBP8.48□□□□□ -1.05
CCNL1-216ENST00000475298 NBEAL1Q6ZS30 2694 aa8.47□□□□□ -1.05
CCNL1-216ENST00000475298 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
CCNL1-216ENST00000475298 C11orf45Q8TAV5 145 aa8.47□□□□□ -1.05
CCNL1-216ENST00000475298 COL6A5A8TX70 2615 aa8.46□□□□□ -1.05
CCNL1-216ENST00000475298 DNAH3Q8TD57 4116 aa8.46□□□□□ -1.05
CCNL1-216ENST00000475298 IGKV2D-24A0A075B6R9 120 aa8.46□□□□□ -1.06
CCNL1-216ENST00000475298 Q5VV11 94 aa8.46□□□□□ -1.06
CCNL1-216ENST00000475298 VPREB1P12018 145 aa8.45□□□□□ -1.06
CCNL1-216ENST00000475298 PRR4Q16378 134 aa8.45□□□□□ -1.06
CCNL1-216ENST00000475298 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
CCNL1-216ENST00000475298 LINC00528Q8N1L1 170 aa8.43□□□□□ -1.06
CCNL1-216ENST00000475298 LINC00588Q9Y4M8 146 aa8.43□□□□□ -1.06
CCNL1-216ENST00000475298 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
CCNL1-216ENST00000475298 RBM12B-AS1Q9P1G2 102 aa8.42□□□□□ -1.06
CCNL1-216ENST00000475298 KTN1-AS1Q86SY8 53 aa8.41□□□□□ -1.06
CCNL1-216ENST00000475298 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
CCNL1-216ENST00000475298 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
CCNL1-216ENST00000475298 MRPL55Q7Z7F7 128 aaKnown RBP8.41□□□□□ -1.06
CCNL1-216ENST00000475298 ETDCA0A1B0GVM5 59 aa8.4□□□□□ -1.06
CCNL1-216ENST00000475298 C16orf90A8MZG2 172 aa8.4□□□□□ -1.07
CCNL1-216ENST00000475298 UBE2BP63146 152 aa8.4□□□□□ -1.07
CCNL1-216ENST00000475298 M0R378 163 aa8.39□□□□□ -1.07
CCNL1-216ENST00000475298 CASC10Q5T4H9 136 aa8.38□□□□□ -1.07
CCNL1-216ENST00000475298 DSCR10P59022 87 aa8.37□□□□□ -1.07
CCNL1-216ENST00000475298 IGLV5-48A0A075B6I7 105 aa8.36□□□□□ -1.07
CCNL1-216ENST00000475298 DNAH10OSP0CZ25 163 aa8.36□□□□□ -1.07
CCNL1-216ENST00000475298 A0A1W2PNM2 257 aa8.36□□□□□ -1.07
CCNL1-216ENST00000475298 SERTAD4-AS1Q5TG53 156 aa8.36□□□□□ -1.07
CCNL1-216ENST00000475298 HUWE1Q7Z6Z7 4374 aaKnown RBP8.36□□□□□ -1.07
CCNL1-216ENST00000475298 Q8N377 158 aa8.35□□□□□ -1.07
CCNL1-216ENST00000475298 K7EQZ3 153 aa8.34□□□□□ -1.07
CCNL1-216ENST00000475298 UBE2AP49459 152 aa8.34□□□□□ -1.07
CCNL1-216ENST00000475298 Q8N9P0 234 aaPredicted RBP8.34□□□□□ -1.07
CCNL1-216ENST00000475298 CHKB-CPT1BH3BT56 60 aa8.34□□□□□ -1.07
CCNL1-216ENST00000475298 MGAM2Q2M2H8 2515 aa8.34□□□□□ -1.08
CCNL1-216ENST00000475298 DEFB105AQ8NG35 78 aa8.33□□□□□ -1.08
CCNL1-216ENST00000475298 DNAH1Q9P2D7 4330 aa8.33□□□□□ -1.08
CCNL1-216ENST00000475298 LCA10Q71F78 164 aa8.33□□□□□ -1.08
CCNL1-216ENST00000475298 LYSTQ99698 3801 aa8.32□□□□□ -1.08
CCNL1-216ENST00000475298 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms