RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PMCHL1Q16048 86 aa6.84□□□□□ -1.31
SKA3-206ENST00000475251 C18orf32Q8TCD1 76 aa6.84□□□□□ -1.31
SKA3-206ENST00000475251 MYMXA0A1B0GTQ4 84 aa6.83□□□□□ -1.32
SKA3-206ENST00000475251 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
SKA3-206ENST00000475251 KRTAP4-2Q9BYR5 136 aa6.83□□□□□ -1.32
SKA3-206ENST00000475251 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 LOC107984156A0A0G2JMH3 177 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 S100A7L2Q5SY68 101 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 UQCC3Q6UW78 93 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 ARL17AQ8IVW1 177 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 MIEN1Q9BRT3 115 aa6.82□□□□□ -1.32
SKA3-206ENST00000475251 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
SKA3-206ENST00000475251 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
SKA3-206ENST00000475251 TMEM218A2RU14 115 aa6.8□□□□□ -1.32
SKA3-206ENST00000475251 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
SKA3-206ENST00000475251 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 IGLV6-57P01721 117 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 HINT1P49773 126 aaPredicted RBP6.79□□□□□ -1.32
SKA3-206ENST00000475251 IFITM2Q01629 132 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 COMMD7Q86VX2 200 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 CBY1Q9Y3M2 126 aa6.79□□□□□ -1.32
SKA3-206ENST00000475251 NDUFC2O95298 119 aa6.78□□□□□ -1.32
SKA3-206ENST00000475251 CLLU1Q5K131 121 aa6.78□□□□□ -1.32
SKA3-206ENST00000475251 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
SKA3-206ENST00000475251 HRCT1Q6UXD1 115 aa6.77□□□□□ -1.33
SKA3-206ENST00000475251 KRTAP9-3Q9BYQ3 159 aa6.77□□□□□ -1.33
SKA3-206ENST00000475251 ST20-AS1Q8NBB2 130 aa6.76□□□□□ -1.33
SKA3-206ENST00000475251 KRTAP4-11Q9BYQ6 195 aa6.76□□□□□ -1.33
SKA3-206ENST00000475251 LAMTOR3Q9UHA4 124 aa6.76□□□□□ -1.33
SKA3-206ENST00000475251 SPRR1BP22528 89 aa6.75□□□□□ -1.33
SKA3-206ENST00000475251 RHEBQ15382 184 aa6.75□□□□□ -1.33
SKA3-206ENST00000475251 RPS10P5Q9NQ39 176 aa6.75□□□□□ -1.33
SKA3-206ENST00000475251 CD164Q04900 197 aa6.74□□□□□ -1.33
SKA3-206ENST00000475251 CHCHD1Q96BP2 118 aaKnown RBP6.74□□□□□ -1.33
SKA3-206ENST00000475251 LEPROTO15243 131 aa6.73□□□□□ -1.33
SKA3-206ENST00000475251 NMUP48645 174 aa6.73□□□□□ -1.33
SKA3-206ENST00000475251 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
SKA3-206ENST00000475251 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
SKA3-206ENST00000475251 DHRS4-AS1Q9P1J3 65 aa6.73□□□□□ -1.33
SKA3-206ENST00000475251 HERVK_113P61574 105 aa6.71□□□□□ -1.34
SKA3-206ENST00000475251 H7C2G1 150 aa6.7□□□□□ -1.34
SKA3-206ENST00000475251 J3QQQ9 107 aa6.7□□□□□ -1.34
SKA3-206ENST00000475251 TSPEAR-AS2P59090 65 aa6.7□□□□□ -1.34
SKA3-206ENST00000475251 Q5XG85 94 aa6.7□□□□□ -1.34
SKA3-206ENST00000475251 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
SKA3-206ENST00000475251 LGALS3P17931 250 aaKnown RBP6.69□□□□□ -1.34
SKA3-206ENST00000475251 PLNP26678 52 aa6.69□□□□□ -1.34
SKA3-206ENST00000475251 FLGP20930 4061 aaPredicted RBP6.68□□□□□ -1.34
SKA3-206ENST00000475251 H0Y8G0 127 aa6.68□□□□□ -1.34
SKA3-206ENST00000475251 HSBP1O75506 76 aa6.68□□□□□ -1.34
SKA3-206ENST00000475251 TAL2Q16559 108 aa6.67□□□□□ -1.34
SKA3-206ENST00000475251 AKR1D1P51857 326 aa6.66□□□□□ -1.34
SKA3-206ENST00000475251 NPC2P61916 151 aa6.66□□□□□ -1.34
SKA3-206ENST00000475251 C10orf91Q5T1B1 145 aa6.66□□□□□ -1.34
SKA3-206ENST00000475251 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
SKA3-206ENST00000475251 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
SKA3-206ENST00000475251 CFC1P0CG37 223 aa6.65□□□□□ -1.34
SKA3-206ENST00000475251 Q1RN00 199 aa6.65□□□□□ -1.34
SKA3-206ENST00000475251 SOSTDC1Q6X4U4 206 aa6.65□□□□□ -1.34
SKA3-206ENST00000475251 SPANXCQ9NY87 97 aa6.65□□□□□ -1.34
SKA3-206ENST00000475251 TEX49A0A1B0GTD5 131 aa6.64□□□□□ -1.35
SKA3-206ENST00000475251 DPM2O94777 84 aa6.63□□□□□ -1.35
SKA3-206ENST00000475251 LEPROTL1O95214 131 aa6.63□□□□□ -1.35
SKA3-206ENST00000475251 ELOF1P60002 83 aaKnown RBP6.63□□□□□ -1.35
SKA3-206ENST00000475251 DEFB105AQ8NG35 78 aa6.63□□□□□ -1.35
SKA3-206ENST00000475251 A0A0J9YXY3 114 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 IGKCP01834 107 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 COX7BP24311 80 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 Q6Q795 121 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 SPANXDQ9BXN6 97 aa6.62□□□□□ -1.35
SKA3-206ENST00000475251 TCL1BO95988 128 aa6.61□□□□□ -1.35
SKA3-206ENST00000475251 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
SKA3-206ENST00000475251 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
SKA3-206ENST00000475251 SNAPINO95295 136 aa6.59□□□□□ -1.35
SKA3-206ENST00000475251 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
SKA3-206ENST00000475251 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
SKA3-206ENST00000475251 NDUFA5Q16718 116 aa6.58□□□□□ -1.36
SKA3-206ENST00000475251 ATP11AUNQ6ZP68 121 aa6.58□□□□□ -1.36
SKA3-206ENST00000475251 LINC00308Q8TCZ7 52 aa6.58□□□□□ -1.36
SKA3-206ENST00000475251 TRBV7-6A0A0J9YX20 115 aa6.57□□□□□ -1.36
SKA3-206ENST00000475251 E9PLD3 99 aa6.57□□□□□ -1.36
SKA3-206ENST00000475251 SVBPQ8N300 66 aa6.57□□□□□ -1.36
SKA3-206ENST00000475251 USH2AO75445 5202 aa6.57□□□□□ -1.36
SKA3-206ENST00000475251 IGLV5-48A0A075B6I7 105 aa6.56□□□□□ -1.36
SKA3-206ENST00000475251 TIMM17BO60830 172 aa6.56□□□□□ -1.36
SKA3-206ENST00000475251 APOC3P02656 99 aa6.56□□□□□ -1.36
SKA3-206ENST00000475251 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
SKA3-206ENST00000475251 A0A1B0GWB2 263 aa6.55□□□□□ -1.36
SKA3-206ENST00000475251 LITAFQ99732 161 aa6.54□□□□□ -1.36
SKA3-206ENST00000475251 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
SKA3-206ENST00000475251 SERF1AO75920 110 aa6.53□□□□□ -1.36
SKA3-206ENST00000475251 FABP4P15090 132 aa6.53□□□□□ -1.36
SKA3-206ENST00000475251 Q75L30 129 aa6.53□□□□□ -1.36
SKA3-206ENST00000475251 A0A0G2JQZ4 141 aa6.52□□□□□ -1.37
SKA3-206ENST00000475251 C20orf202A1L168 122 aa6.52□□□□□ -1.37
SKA3-206ENST00000475251 A4D1N5 150 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms