RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 FAM19A3Q7Z5A8 133 aa7.63□□□□□ -1.19
HLA-DOB-208ENST00000475235 TIMM21Q9BVV7 248 aa7.63□□□□□ -1.19
HLA-DOB-208ENST00000475235 UBE2D4Q9Y2X8 147 aa7.63□□□□□ -1.19
HLA-DOB-208ENST00000475235 TRAV12-1A0A0B4J245 112 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 M0QY20 66 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 UBE2AP49459 152 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 CNFNQ9BYD5 112 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 IGKV2D-24A0A075B6R9 120 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 KRTAP10-1P60331 282 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 SUMO4Q6EEV6 95 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 C20orf197Q8N268 126 aa7.62□□□□□ -1.19
HLA-DOB-208ENST00000475235 CRPP02741 224 aa7.61□□□□□ -1.19
HLA-DOB-208ENST00000475235 CIRBPQ14011 172 aaKnown RBP7.61□□□□□ -1.19
HLA-DOB-208ENST00000475235 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
HLA-DOB-208ENST00000475235 NTM-AS1Q6ZSK4 140 aa7.6□□□□□ -1.19
HLA-DOB-208ENST00000475235 PRYO14603 147 aa7.59□□□□□ -1.19
HLA-DOB-208ENST00000475235 ERC2-IT1O76042 136 aa7.59□□□□□ -1.19
HLA-DOB-208ENST00000475235 ANGP03950 147 aaKnown RBP7.59□□□□□ -1.19
HLA-DOB-208ENST00000475235 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
HLA-DOB-208ENST00000475235 A0A087X002 238 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 K7EMI3 77 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 LECT2O14960 151 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 PRSS1P07477 247 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 MIAQ16674 131 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 ENHOQ6UWT2 76 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 TMEM223A0PJW6 202 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 LINC00313P59037 77 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 C14orf177Q52M58 125 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 Q75L30 129 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
HLA-DOB-208ENST00000475235 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
HLA-DOB-208ENST00000475235 A6NN06 94 aa7.56□□□□□ -1.2
HLA-DOB-208ENST00000475235 PRR3P79522 188 aaKnown RBP7.56□□□□□ -1.2
HLA-DOB-208ENST00000475235 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
HLA-DOB-208ENST00000475235 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
HLA-DOB-208ENST00000475235 LINC00269Q8N2A0 174 aa7.55□□□□□ -1.2
HLA-DOB-208ENST00000475235 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
HLA-DOB-208ENST00000475235 F8VRH5 84 aa7.54□□□□□ -1.2
HLA-DOB-208ENST00000475235 PSPHP1O15172 72 aa7.54□□□□□ -1.2
HLA-DOB-208ENST00000475235 MPLKIPQ8TAP9 179 aa7.54□□□□□ -1.2
HLA-DOB-208ENST00000475235 F8WEM9 126 aa7.53□□□□□ -1.2
HLA-DOB-208ENST00000475235 REG3AQ06141 175 aa7.53□□□□□ -1.2
HLA-DOB-208ENST00000475235 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
HLA-DOB-208ENST00000475235 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
HLA-DOB-208ENST00000475235 FAT1Q14517 4588 aa7.53□□□□□ -1.2
HLA-DOB-208ENST00000475235 ZNF815PA8K554 130 aa7.52□□□□□ -1.2
HLA-DOB-208ENST00000475235 Q5VSD8 79 aa7.52□□□□□ -1.2
HLA-DOB-208ENST00000475235 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
HLA-DOB-208ENST00000475235 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
HLA-DOB-208ENST00000475235 Q6ZSA8 131 aa7.52□□□□□ -1.21
HLA-DOB-208ENST00000475235 C20orf203Q8NBC4 194 aa7.52□□□□□ -1.21
HLA-DOB-208ENST00000475235 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
HLA-DOB-208ENST00000475235 SDHAF1A6NFY7 115 aa7.51□□□□□ -1.21
HLA-DOB-208ENST00000475235 SUMO2P61956 95 aaKnown RBP7.51□□□□□ -1.21
HLA-DOB-208ENST00000475235 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
HLA-DOB-208ENST00000475235 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
HLA-DOB-208ENST00000475235 IGLV4-60A0A075B6I1 120 aa7.5□□□□□ -1.21
HLA-DOB-208ENST00000475235 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
HLA-DOB-208ENST00000475235 CYP4F30PQ9H0H9 118 aa7.5□□□□□ -1.21
HLA-DOB-208ENST00000475235 I3L3M4 83 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 PRSS2P07478 247 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 HAMPP81172 84 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 XP32Q5T750 250 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
HLA-DOB-208ENST00000475235 IGLV10-54A0A075B6I4 117 aa7.48□□□□□ -1.21
HLA-DOB-208ENST00000475235 TRIAP1O43715 76 aa7.48□□□□□ -1.21
HLA-DOB-208ENST00000475235 Q1RN00 199 aa7.48□□□□□ -1.21
HLA-DOB-208ENST00000475235 PPP1R17O96001 155 aa7.47□□□□□ -1.21
HLA-DOB-208ENST00000475235 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
HLA-DOB-208ENST00000475235 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
HLA-DOB-208ENST00000475235 C6orf99Q4VX62 202 aa7.47□□□□□ -1.21
HLA-DOB-208ENST00000475235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.22
HLA-DOB-208ENST00000475235 A0A087WZ39 114 aa7.46□□□□□ -1.22
HLA-DOB-208ENST00000475235 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.22
HLA-DOB-208ENST00000475235 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 DNAL4O96015 105 aa7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 POLR2KP53803 58 aaKnown RBP7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 SOSTDC1Q6X4U4 206 aa7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 C9orf163Q8N9P6 203 aa7.45□□□□□ -1.22
HLA-DOB-208ENST00000475235 GAS8-AS1O95177 125 aa7.44□□□□□ -1.22
HLA-DOB-208ENST00000475235 TSHBP01222 138 aa7.44□□□□□ -1.22
HLA-DOB-208ENST00000475235 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
HLA-DOB-208ENST00000475235 IGKV3OR2-268A0A0C4DH90 116 aa7.43□□□□□ -1.22
HLA-DOB-208ENST00000475235 D6R8Y8 96 aa7.43□□□□□ -1.22
HLA-DOB-208ENST00000475235 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
HLA-DOB-208ENST00000475235 FAM229BQ4G0N7 80 aa7.43□□□□□ -1.22
HLA-DOB-208ENST00000475235 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
HLA-DOB-208ENST00000475235 CLEC2BQ92478 149 aa7.42□□□□□ -1.22
HLA-DOB-208ENST00000475235 hDV103S1A0JD37 113 aa7.42□□□□□ -1.22
HLA-DOB-208ENST00000475235 NRACQ8N912 160 aa7.42□□□□□ -1.22
HLA-DOB-208ENST00000475235 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
HLA-DOB-208ENST00000475235 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms