RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 LINC00518Q8N0U6 118 aa9.53□□□□□ -0.88
COL1A1-204ENST00000474644 TRAV23DV6A0A075B6W5 121 aa9.52□□□□□ -0.89
COL1A1-204ENST00000474644 OXTP01178 125 aa9.52□□□□□ -0.89
COL1A1-204ENST00000474644 HIGD1BQ9P298 99 aa9.52□□□□□ -0.89
COL1A1-204ENST00000474644 KRTAP4-16G5E9R7 235 aaPredicted RBP9.51□□□□□ -0.89
COL1A1-204ENST00000474644 OR13C6PQ8NH95 151 aa9.51□□□□□ -0.89
COL1A1-204ENST00000474644 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
COL1A1-204ENST00000474644 ETDCA0A1B0GVM5 59 aa9.5□□□□□ -0.89
COL1A1-204ENST00000474644 A4D1N5 150 aa9.48□□□□□ -0.89
COL1A1-204ENST00000474644 ZNF73O43830 326 aaPredicted RBP9.48□□□□□ -0.89
COL1A1-204ENST00000474644 CBY1Q9Y3M2 126 aa9.48□□□□□ -0.89
COL1A1-204ENST00000474644 B5MCH6 92 aa9.47□□□□□ -0.89
COL1A1-204ENST00000474644 KRTAP1-4P0C5Y4 121 aa9.47□□□□□ -0.89
COL1A1-204ENST00000474644 SMIM6P0DI80 62 aa9.47□□□□□ -0.89
COL1A1-204ENST00000474644 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
COL1A1-204ENST00000474644 LOC105371267A0A1B0GV96 52 aa9.46□□□□□ -0.9
COL1A1-204ENST00000474644 A6NDN8 102 aa9.46□□□□□ -0.9
COL1A1-204ENST00000474644 J3QL48 77 aa9.46□□□□□ -0.9
COL1A1-204ENST00000474644 HIGD2AQ9BW72 106 aa9.46□□□□□ -0.9
COL1A1-204ENST00000474644 TRAV13-2A0A0B4J235 113 aa9.45□□□□□ -0.9
COL1A1-204ENST00000474644 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
COL1A1-204ENST00000474644 Q6ZRX8 168 aa9.44□□□□□ -0.9
COL1A1-204ENST00000474644 UQCR10Q9UDW1 63 aa9.44□□□□□ -0.9
COL1A1-204ENST00000474644 TAL2Q16559 108 aa9.43□□□□□ -0.9
COL1A1-204ENST00000474644 SMCR5Q8TEV8 140 aa9.43□□□□□ -0.9
COL1A1-204ENST00000474644 C12orf57Q99622 126 aa9.43□□□□□ -0.9
COL1A1-204ENST00000474644 C6orf99Q4VX62 202 aa9.41□□□□□ -0.9
COL1A1-204ENST00000474644 Q9BRP9 147 aa9.41□□□□□ -0.9
COL1A1-204ENST00000474644 HINT1P49773 126 aaPredicted RBP9.4□□□□□ -0.9
COL1A1-204ENST00000474644 CEND1Q8N111 149 aa9.4□□□□□ -0.9
COL1A1-204ENST00000474644 PRR26Q8N8Z3 221 aa9.4□□□□□ -0.9
COL1A1-204ENST00000474644 HSD52Q0P140 79 aa9.39□□□□□ -0.91
COL1A1-204ENST00000474644 TNXBP22105 4242 aa9.39□□□□□ -0.91
COL1A1-204ENST00000474644 COX7BP24311 80 aa9.38□□□□□ -0.91
COL1A1-204ENST00000474644 RPL13AP40429 203 aaKnown RBP9.38□□□□□ -0.91
COL1A1-204ENST00000474644 ELOF1P60002 83 aaKnown RBP9.38□□□□□ -0.91
COL1A1-204ENST00000474644 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
COL1A1-204ENST00000474644 SMIM11BQ8TCY0 68 aa9.38□□□□□ -0.91
COL1A1-204ENST00000474644 PRO1933Q9H354 126 aa9.38□□□□□ -0.91
COL1A1-204ENST00000474644 ERC2-IT1O76042 136 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 CFC1BP0CG36 223 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 CFC1P0CG37 223 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 FXYD2P54710 66 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 SPRR4Q96PI1 79 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
COL1A1-204ENST00000474644 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
COL1A1-204ENST00000474644 A0A087X002 238 aa9.36□□□□□ -0.91
COL1A1-204ENST00000474644 TRBV7-6A0A0J9YX20 115 aa9.36□□□□□ -0.91
COL1A1-204ENST00000474644 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
COL1A1-204ENST00000474644 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
COL1A1-204ENST00000474644 A6NJY4 79 aa9.35□□□□□ -0.91
COL1A1-204ENST00000474644 A0A1B0GWB2 263 aa9.34□□□□□ -0.91
COL1A1-204ENST00000474644 FAM229BQ4G0N7 80 aa9.34□□□□□ -0.91
COL1A1-204ENST00000474644 RAB37Q96AX2 223 aa9.34□□□□□ -0.91
COL1A1-204ENST00000474644 DHRS4-AS1Q9P1J3 65 aa9.34□□□□□ -0.91
COL1A1-204ENST00000474644 CRYGAP11844 174 aa9.33□□□□□ -0.92
COL1A1-204ENST00000474644 H7C2G1 150 aa9.31□□□□□ -0.92
COL1A1-204ENST00000474644 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
COL1A1-204ENST00000474644 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
COL1A1-204ENST00000474644 GAGE2AQ6NT46 116 aa9.3□□□□□ -0.92
COL1A1-204ENST00000474644 ST20-AS1Q8NBB2 130 aa9.3□□□□□ -0.92
COL1A1-204ENST00000474644 NHP2Q9NX24 153 aaKnown RBP9.29□□□□□ -0.92
COL1A1-204ENST00000474644 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
COL1A1-204ENST00000474644 K7ERJ3 54 aa9.28□□□□□ -0.92
COL1A1-204ENST00000474644 VAMP3Q15836 100 aa9.28□□□□□ -0.92
COL1A1-204ENST00000474644 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
COL1A1-204ENST00000474644 TYMSOSQ8TAI1 123 aa9.27□□□□□ -0.93
COL1A1-204ENST00000474644 Q1RN00 199 aa9.26□□□□□ -0.93
COL1A1-204ENST00000474644 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
COL1A1-204ENST00000474644 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
COL1A1-204ENST00000474644 CTAG1AP78358 180 aa9.25□□□□□ -0.93
COL1A1-204ENST00000474644 LINC00575Q6W349 94 aa9.24□□□□□ -0.93
COL1A1-204ENST00000474644 SPRR1BP22528 89 aa9.23□□□□□ -0.93
COL1A1-204ENST00000474644 HMCN2Q8NDA2 5059 aa9.22□□□□□ -0.93
COL1A1-204ENST00000474644 SLC25A20O43772 301 aa9.22□□□□□ -0.93
COL1A1-204ENST00000474644 M0R143 59 aa9.21□□□□□ -0.94
COL1A1-204ENST00000474644 IGLV5-48A0A075B6I7 105 aa9.2□□□□□ -0.94
COL1A1-204ENST00000474644 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
COL1A1-204ENST00000474644 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
COL1A1-204ENST00000474644 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
COL1A1-204ENST00000474644 DEFB105AQ8NG35 78 aa9.2□□□□□ -0.94
COL1A1-204ENST00000474644 TRIAP1O43715 76 aa9.19□□□□□ -0.94
COL1A1-204ENST00000474644 TSPAN13O95857 204 aa9.19□□□□□ -0.94
COL1A1-204ENST00000474644 TEX49A0A1B0GTD5 131 aa9.18□□□□□ -0.94
COL1A1-204ENST00000474644 H0YGX0 51 aa9.18□□□□□ -0.94
COL1A1-204ENST00000474644 MOBPQ13875 183 aa9.18□□□□□ -0.94
COL1A1-204ENST00000474644 LINC00304Q8N9R0 145 aa9.18□□□□□ -0.94
COL1A1-204ENST00000474644 Q6ZQY7 126 aa9.17□□□□□ -0.94
COL1A1-204ENST00000474644 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
COL1A1-204ENST00000474644 UBR4Q5T4S7 5183 aa9.17□□□□□ -0.94
COL1A1-204ENST00000474644 PSMB2P49721 201 aa9.15□□□□□ -0.94
COL1A1-204ENST00000474644 C9orf153Q5TBE3 101 aa9.15□□□□□ -0.94
COL1A1-204ENST00000474644 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.15□□□□□ -0.94
COL1A1-204ENST00000474644 Q8NBF4 154 aa9.15□□□□□ -0.94
COL1A1-204ENST00000474644 LAMTOR3Q9UHA4 124 aa9.15□□□□□ -0.94
COL1A1-204ENST00000474644 SMIM29Q86T20 159 aa9.14□□□□□ -0.95
COL1A1-204ENST00000474644 Q8N377 158 aa9.14□□□□□ -0.95
COL1A1-204ENST00000474644 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
COL1A1-204ENST00000474644 CLEC2BQ92478 149 aa9.12□□□□□ -0.95
COL1A1-204ENST00000474644 A0A1B0GX51 115 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms