RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 NCR3O14931 201 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 TSPAN13O95857 204 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 SMIM13P0DJ93 91 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 UBE2AP49459 152 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 FAM19A1Q7Z5A9 133 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 PMCHL2Q9BQD1 86 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
VPS50-211ENST00000474412 ATP6V1G1O75348 118 aa4.03□□□□□ -1.76
VPS50-211ENST00000474412 RPL13AP40429 203 aaKnown RBP4.03□□□□□ -1.76
VPS50-211ENST00000474412 LINC00158P58513 81 aa4.03□□□□□ -1.76
VPS50-211ENST00000474412 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
VPS50-211ENST00000474412 DAND5Q8N907 189 aa4.03□□□□□ -1.76
VPS50-211ENST00000474412 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
VPS50-211ENST00000474412 COX17Q14061 63 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 PRR4Q16378 134 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 MEIG1Q5JSS6 88 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 FAM218AQ96MZ4 157 aa4.02□□□□□ -1.77
VPS50-211ENST00000474412 COLCA2A8K830 154 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 LEPROTL1O95214 131 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 CRYGAP11844 174 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 FABP4P15090 132 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 BOD1L2Q8IYS8 172 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 NDUFA12Q9UI09 145 aa4.01□□□□□ -1.77
VPS50-211ENST00000474412 TRBV10-3A0A0K0K1G6 114 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
VPS50-211ENST00000474412 NPC2P61916 151 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 SFTA2Q6UW10 78 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 SOSTDC1Q6X4U4 206 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 LINC00304Q8N9R0 145 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 PLEKHB2Q96CS7 222 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 SPRR4Q96PI1 79 aa3.99□□□□□ -1.77
VPS50-211ENST00000474412 LEPROTO15243 131 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BKO60814 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BJP06899 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BOP23527 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BBP33778 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 SPRR1AP35321 89 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 FAM229BQ4G0N7 80 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
VPS50-211ENST00000474412 SMCR5Q8TEV8 140 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
VPS50-211ENST00000474412 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 J3QQQ9 107 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 ERC2-IT1O76042 136 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 DPM2O94777 84 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 IGKCP01834 107 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 HERV-K104P63124 156 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 PPDPFQ9H3Y8 114 aa3.97□□□□□ -1.77
VPS50-211ENST00000474412 IGKV2D-26A0A0A0MRZ7 120 aa3.96□□□□□ -1.78
VPS50-211ENST00000474412 PLNP26678 52 aa3.96□□□□□ -1.78
VPS50-211ENST00000474412 TTTY13Q9BZ97 58 aa3.96□□□□□ -1.78
VPS50-211ENST00000474412 KCNQ1DNQ9H478 68 aa3.96□□□□□ -1.78
VPS50-211ENST00000474412 HSPB8Q9UJY1 196 aa3.96□□□□□ -1.78
VPS50-211ENST00000474412 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
VPS50-211ENST00000474412 LGALS3P17931 250 aaKnown RBP3.95□□□□□ -1.78
VPS50-211ENST00000474412 LINC00337Q8N6G1 96 aa3.95□□□□□ -1.78
VPS50-211ENST00000474412 Q9BRP9 147 aa3.95□□□□□ -1.78
VPS50-211ENST00000474412 LOC107984156A0A0G2JMH3 177 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 ETDCA0A1B0GVM5 59 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 E9PLD3 99 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 SYS1-DBNDD2H3BUS1 97 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 DDTP30046 118 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 HERVK_113P61574 105 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 ARL17AQ8IVW1 177 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 MAP1LC3CQ9BXW4 147 aa3.94□□□□□ -1.78
VPS50-211ENST00000474412 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
VPS50-211ENST00000474412 S100A1P23297 94 aa3.93□□□□□ -1.78
VPS50-211ENST00000474412 NMUP48645 174 aa3.93□□□□□ -1.78
VPS50-211ENST00000474412 LINC01545Q5VT33 79 aa3.93□□□□□ -1.78
VPS50-211ENST00000474412 SPANXB1Q9NS25 103 aaPredicted RBP3.93□□□□□ -1.78
VPS50-211ENST00000474412 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 IGLV6-57P01721 117 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 C3orf79P0CE67 100 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 MOBPQ13875 183 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 LINC00483Q53H64 154 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 Q6ZRX8 168 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 MIEN1Q9BRT3 115 aa3.92□□□□□ -1.78
VPS50-211ENST00000474412 TRAV23DV6A0A075B6W5 121 aa3.91□□□□□ -1.78
VPS50-211ENST00000474412 TPRXLQ17RH7 258 aa3.91□□□□□ -1.78
VPS50-211ENST00000474412 ST20-AS1Q8NBB2 130 aa3.91□□□□□ -1.78
VPS50-211ENST00000474412 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
VPS50-211ENST00000474412 MUC2Q02817 5179 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 ZNF815PA8K554 130 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 LINC00587B1AMM8 73 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 NDUFC2O95298 119 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 KRTDAPP60985 99 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 S100A7L2Q5SY68 101 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 ATOH7Q8N100 152 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 LINC00308Q8TCZ7 52 aa3.9□□□□□ -1.79
VPS50-211ENST00000474412 A8MU10 97 aa3.89□□□□□ -1.79
VPS50-211ENST00000474412 ZNF73O43830 326 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms