RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PMVKQ15126 192 aa2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 BOD1L2Q8IYS8 172 aa2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 SMCR5Q8TEV8 140 aa2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 ZNF625Q96I27 306 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 FCGBPQ9Y6R7 5405 aaPredicted RBP2.79□□□□□ -1.96
SNRNP40-204ENST00000474025 IGLV9-49A0A0B4J1Y8 123 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 ETDCA0A1B0GVM5 59 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 LINC01546A6NGU7 62 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 LINC01549A6NIU2 74 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 KIAA1644Q3SXP7 199 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 SSBP3-AS1Q7Z2R9 100 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 LINC00846Q9NV44 126 aa2.78□□□□□ -1.96
SNRNP40-204ENST00000474025 ERC2-IT1O76042 136 aa2.77□□□□□ -1.97
SNRNP40-204ENST00000474025 MT-ND4LP03901 98 aa2.77□□□□□ -1.97
SNRNP40-204ENST00000474025 SFTA2Q6UW10 78 aa2.77□□□□□ -1.97
SNRNP40-204ENST00000474025 TRBV10-3A0A0K0K1G6 114 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 C9orf92A6NGG3 77 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 NCR3O14931 201 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 CFC1P0CG37 223 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 LINC00158P58513 81 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 Q9BRP9 147 aa2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 SPANXB1Q9NS25 103 aaPredicted RBP2.76□□□□□ -1.97
SNRNP40-204ENST00000474025 A0A096LNJ9 63 aa2.75□□□□□ -1.97
SNRNP40-204ENST00000474025 C11orf86A6NJI1 115 aa2.75□□□□□ -1.97
SNRNP40-204ENST00000474025 SNAPINO95295 136 aa2.75□□□□□ -1.97
SNRNP40-204ENST00000474025 FA2HQ7L5A8 372 aa2.75□□□□□ -1.97
SNRNP40-204ENST00000474025 TRAV9-1A0A075B6T8 112 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 SMIM13P0DJ93 91 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 NDUFA6P56556 154 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 TMEM170BQ5T4T1 132 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 Q6ZRX8 168 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 MIR7-3HGQ8N6C7 128 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 SMCO4Q9NRQ5 59 aa2.74□□□□□ -1.97
SNRNP40-204ENST00000474025 S100A1P23297 94 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 TAL2Q16559 108 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 Q6ZVQ6 151 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 MTURNQ8N3F0 131 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 LIMD2Q9BT23 127 aa2.73□□□□□ -1.97
SNRNP40-204ENST00000474025 TMEM223A0PJW6 202 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 IGLV6-57P01721 117 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 HBDP02042 147 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 DDTP30046 118 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 MEIG1Q5JSS6 88 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 BAGE3Q86Y29 109 aa2.72□□□□□ -1.97
SNRNP40-204ENST00000474025 LOC107984156A0A0G2JMH3 177 aa2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 PMCHL1Q16048 86 aa2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 ARL17AQ8IVW1 177 aa2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 ST20-AS1Q8NBB2 130 aa2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
SNRNP40-204ENST00000474025 LINC00614P0C842 121 aa2.7□□□□□ -1.98
SNRNP40-204ENST00000474025 FABP9Q0Z7S8 132 aa2.7□□□□□ -1.98
SNRNP40-204ENST00000474025 JOSD1Q15040 202 aaPredicted RBP2.7□□□□□ -1.98
SNRNP40-204ENST00000474025 HRCT1Q6UXD1 115 aa2.7□□□□□ -1.98
SNRNP40-204ENST00000474025 C18orf32Q8TCD1 76 aa2.7□□□□□ -1.98
SNRNP40-204ENST00000474025 TRAV23DV6A0A075B6W5 121 aa2.69□□□□□ -1.98
SNRNP40-204ENST00000474025 LINC00587B1AMM8 73 aa2.69□□□□□ -1.98
SNRNP40-204ENST00000474025 SPRR1BP22528 89 aa2.69□□□□□ -1.98
SNRNP40-204ENST00000474025 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 TRAV12-1A0A0B4J245 112 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 MYMXA0A1B0GTQ4 84 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 A0A1B0GV72 72 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 ZNF73O43830 326 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 NDUFC2O95298 119 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 S100PP25815 95 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 TSPEAR-AS2P59090 65 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 CD164Q04900 197 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 NDUFA5Q16718 116 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 S100A7L2Q5SY68 101 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 C1orf195Q5TG92 126 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 Q5XG85 94 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 SEC11CQ9BY50 192 aa2.68□□□□□ -1.98
SNRNP40-204ENST00000474025 H7C2G1 150 aa2.67□□□□□ -1.98
SNRNP40-204ENST00000474025 SLC25A34Q6PIV7 304 aa2.67□□□□□ -1.98
SNRNP40-204ENST00000474025 IFI27L1Q96BM0 104 aa2.67□□□□□ -1.98
SNRNP40-204ENST00000474025 MIEN1Q9BRT3 115 aa2.67□□□□□ -1.98
SNRNP40-204ENST00000474025 RPS10P5Q9NQ39 176 aa2.67□□□□□ -1.98
SNRNP40-204ENST00000474025 TMEM218A2RU14 115 aa2.66□□□□□ -1.98
SNRNP40-204ENST00000474025 A6NDN8 102 aa2.66□□□□□ -1.98
SNRNP40-204ENST00000474025 SOSTDC1Q6X4U4 206 aa2.66□□□□□ -1.98
SNRNP40-204ENST00000474025 LAMTOR3Q9UHA4 124 aa2.66□□□□□ -1.98
SNRNP40-204ENST00000474025 LEPROTO15243 131 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 HINT1P49773 126 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 IFITM2Q01629 132 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 Q1RN00 199 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 LCE1AQ5T7P2 110 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 Q6Q795 121 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 SMIM29Q86T20 159 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 COMMD7Q86VX2 200 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 PRO1933Q9H354 126 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 TRAPPC1Q9Y5R8 145 aa2.65□□□□□ -1.99
SNRNP40-204ENST00000474025 J3QQQ9 107 aa2.64□□□□□ -1.99
SNRNP40-204ENST00000474025 NPC2P61916 151 aa2.64□□□□□ -1.99
SNRNP40-204ENST00000474025 KRTAP6-3Q3LI67 103 aa2.64□□□□□ -1.99
SNRNP40-204ENST00000474025 CLLU1Q5K131 121 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms