RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 FABP2P12104 132 aa11.98□□□□□ -0.49
SMARCD3-209ENST00000472988 HAMPP81172 84 aa11.98□□□□□ -0.49
SMARCD3-209ENST00000472988 DIRC1Q969H9 104 aa11.98□□□□□ -0.49
SMARCD3-209ENST00000472988 UBE2BP63146 152 aa11.97□□□□□ -0.49
SMARCD3-209ENST00000472988 SCGB1C2P0DMR2 95 aa11.97□□□□□ -0.49
SMARCD3-209ENST00000472988 CBY1Q9Y3M2 126 aa11.97□□□□□ -0.49
SMARCD3-209ENST00000472988 COX6CP09669 75 aa11.96□□□□□ -0.5
SMARCD3-209ENST00000472988 SPRR1AP35321 89 aa11.96□□□□□ -0.5
SMARCD3-209ENST00000472988 CLEC2BQ92478 149 aa11.95□□□□□ -0.5
SMARCD3-209ENST00000472988 VAMP3Q15836 100 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 LYRM7Q5U5X0 104 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 DYNC1H1Q14204 4646 aaKnown RBP11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 LRP1BQ9NZR2 4599 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 TCL1BO95988 128 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 REG3GQ6UW15 175 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 SPCS1Q9Y6A9 102 aa11.94□□□□□ -0.5
SMARCD3-209ENST00000472988 KRTAP4-16G5E9R7 235 aaPredicted RBP11.93□□□□□ -0.5
SMARCD3-209ENST00000472988 FAM218AQ96MZ4 157 aa11.93□□□□□ -0.5
SMARCD3-209ENST00000472988 H0YGX0 51 aa11.91□□□□□ -0.5
SMARCD3-209ENST00000472988 K7EP34 96 aa11.91□□□□□ -0.5
SMARCD3-209ENST00000472988 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
SMARCD3-209ENST00000472988 TRBV7-6A0A0J9YX20 115 aa11.9□□□□□ -0.5
SMARCD3-209ENST00000472988 COX7BP24311 80 aa11.9□□□□□ -0.5
SMARCD3-209ENST00000472988 TRBV20-1A0A075B6N2 111 aa11.88□□□□□ -0.51
SMARCD3-209ENST00000472988 LINC00528Q8N1L1 170 aa11.88□□□□□ -0.51
SMARCD3-209ENST00000472988 ETDCA0A1B0GVM5 59 aa11.87□□□□□ -0.51
SMARCD3-209ENST00000472988 B5MCH6 92 aa11.87□□□□□ -0.51
SMARCD3-209ENST00000472988 LST1O00453 97 aa11.87□□□□□ -0.51
SMARCD3-209ENST00000472988 Q6ZRX8 168 aa11.87□□□□□ -0.51
SMARCD3-209ENST00000472988 ATXN8Q156A1 80 aa11.86□□□□□ -0.51
SMARCD3-209ENST00000472988 LINC00575Q6W349 94 aa11.86□□□□□ -0.51
SMARCD3-209ENST00000472988 PSORS1C2Q9UIG4 136 aa11.86□□□□□ -0.51
SMARCD3-209ENST00000472988 H3BMG7 143 aa11.85□□□□□ -0.51
SMARCD3-209ENST00000472988 XGP55808 180 aa11.85□□□□□ -0.51
SMARCD3-209ENST00000472988 GTF2H5Q6ZYL4 71 aa11.84□□□□□ -0.51
SMARCD3-209ENST00000472988 FAM19A1Q7Z5A9 133 aa11.84□□□□□ -0.51
SMARCD3-209ENST00000472988 PRLHP81277 87 aa11.84□□□□□ -0.51
SMARCD3-209ENST00000472988 BCE1O60756 84 aa11.83□□□□□ -0.52
SMARCD3-209ENST00000472988 Q9BRP9 147 aa11.82□□□□□ -0.52
SMARCD3-209ENST00000472988 APOBP04114 4563 aaKnown RBP11.81□□□□□ -0.52
SMARCD3-209ENST00000472988 TRACP01848 142 aa11.81□□□□□ -0.52
SMARCD3-209ENST00000472988 hADV29S1A0JD25 119 aa11.8□□□□□ -0.52
SMARCD3-209ENST00000472988 UBE2V1Q13404 147 aa11.8□□□□□ -0.52
SMARCD3-209ENST00000472988 A0A1B0GX51 115 aa11.79□□□□□ -0.52
SMARCD3-209ENST00000472988 C1orf137Q5JT78 98 aa11.79□□□□□ -0.52
SMARCD3-209ENST00000472988 KRTAP13-1Q8IUC0 172 aa11.79□□□□□ -0.52
SMARCD3-209ENST00000472988 MTURNQ8N3F0 131 aa11.79□□□□□ -0.52
SMARCD3-209ENST00000472988 SLC25A20O43772 301 aa11.78□□□□□ -0.52
SMARCD3-209ENST00000472988 SMCR5Q8TEV8 140 aa11.78□□□□□ -0.52
SMARCD3-209ENST00000472988 H0Y9J4 135 aa11.78□□□□□ -0.52
SMARCD3-209ENST00000472988 UBE2AP49459 152 aa11.78□□□□□ -0.52
SMARCD3-209ENST00000472988 DHRS4-AS1Q9P1J3 65 aa11.77□□□□□ -0.53
SMARCD3-209ENST00000472988 C9JAW5 83 aa11.76□□□□□ -0.53
SMARCD3-209ENST00000472988 DNAL4O96015 105 aa11.76□□□□□ -0.53
SMARCD3-209ENST00000472988 INAFM2P0DMQ5 153 aa11.76□□□□□ -0.53
SMARCD3-209ENST00000472988 ERC2-IT1O76042 136 aa11.75□□□□□ -0.53
SMARCD3-209ENST00000472988 PRO0461Q9UI25 63 aa11.75□□□□□ -0.53
SMARCD3-209ENST00000472988 Q6ZQY7 126 aa11.74□□□□□ -0.53
SMARCD3-209ENST00000472988 HIGD2AQ9BW72 106 aa11.74□□□□□ -0.53
SMARCD3-209ENST00000472988 SNCGO76070 127 aa11.73□□□□□ -0.53
SMARCD3-209ENST00000472988 IGLV7-43P04211 117 aa11.72□□□□□ -0.53
SMARCD3-209ENST00000472988 SMR3BP02814 79 aaPredicted RBP11.71□□□□□ -0.53
SMARCD3-209ENST00000472988 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.53
SMARCD3-209ENST00000472988 SMCPP49901 116 aaPredicted RBP11.71□□□□□ -0.54
SMARCD3-209ENST00000472988 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.71□□□□□ -0.54
SMARCD3-209ENST00000472988 ZNF861PO60384 105 aa11.69□□□□□ -0.54
SMARCD3-209ENST00000472988 ST20-AS1Q8NBB2 130 aa11.69□□□□□ -0.54
SMARCD3-209ENST00000472988 ORMDL1Q9P0S3 153 aa11.69□□□□□ -0.54
SMARCD3-209ENST00000472988 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
SMARCD3-209ENST00000472988 BAALC-AS2P0C853 105 aa11.67□□□□□ -0.54
SMARCD3-209ENST00000472988 H3BT86 120 aa11.66□□□□□ -0.54
SMARCD3-209ENST00000472988 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
SMARCD3-209ENST00000472988 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
SMARCD3-209ENST00000472988 F8W1H4 67 aa11.65□□□□□ -0.54
SMARCD3-209ENST00000472988 ANKRD29Q8N6D5 301 aa11.65□□□□□ -0.54
SMARCD3-209ENST00000472988 VPS13BQ7Z7G8 4022 aa11.65□□□□□ -0.54
SMARCD3-209ENST00000472988 IGLV5-48A0A075B6I7 105 aa11.63□□□□□ -0.55
SMARCD3-209ENST00000472988 OCIAD2Q56VL3 154 aa11.63□□□□□ -0.55
SMARCD3-209ENST00000472988 DEFB105AQ8NG35 78 aa11.63□□□□□ -0.55
SMARCD3-209ENST00000472988 LINC01600Q96MT4 127 aa11.63□□□□□ -0.55
SMARCD3-209ENST00000472988 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
SMARCD3-209ENST00000472988 Q8N377 158 aa11.62□□□□□ -0.55
SMARCD3-209ENST00000472988 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
SMARCD3-209ENST00000472988 HSPG2P98160 4391 aa11.6□□□□□ -0.55
SMARCD3-209ENST00000472988 TMEM256-PLSCR3K7ERE1 68 aa11.6□□□□□ -0.55
SMARCD3-209ENST00000472988 RYR1P21817 5038 aa11.58□□□□□ -0.56
SMARCD3-209ENST00000472988 SPRR4Q96PI1 79 aa11.58□□□□□ -0.56
SMARCD3-209ENST00000472988 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
SMARCD3-209ENST00000472988 H3BQ85 93 aa11.57□□□□□ -0.56
SMARCD3-209ENST00000472988 GHRHP01286 108 aa11.57□□□□□ -0.56
SMARCD3-209ENST00000472988 PPDPFLQ8WWR9 84 aa11.57□□□□□ -0.56
SMARCD3-209ENST00000472988 FAT1Q14517 4588 aa11.57□□□□□ -0.56
SMARCD3-209ENST00000472988 GAGE2AQ6NT46 116 aa11.56□□□□□ -0.56
SMARCD3-209ENST00000472988 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
SMARCD3-209ENST00000472988 C3orf22Q8N5N4 141 aa11.55□□□□□ -0.56
SMARCD3-209ENST00000472988 SPRR1BP22528 89 aa11.55□□□□□ -0.56
SMARCD3-209ENST00000472988 ZNF706Q9Y5V0 76 aaPredicted RBP11.54□□□□□ -0.56
SMARCD3-209ENST00000472988 A0A1B0GV72 72 aa11.53□□□□□ -0.56
SMARCD3-209ENST00000472988 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
SMARCD3-209ENST00000472988 TEN1Q86WV5 123 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms