RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 H3BNG1 76 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 LINC00032P0C843 101 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 FXYD4P59646 89 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP13-1Q8IUC0 172 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 AMELYQ99218 206 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 WFDC6Q9BQY6 131 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 TMEM14BQ9NUH8 114 aa1.13□□□□□ -2.23
XRN1-210ENST00000472697 M0R2N4 97 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 GNG4P50150 75 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 POLR2JP52435 117 aaKnown RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 SMIM11AP58511 58 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 UNQ5815/PRO19632Q6UWF5 114 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 Q6ZSA8 131 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 ATOH7Q8N100 152 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 LINC00208Q96KT6 92 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 CYSTM1Q9H1C7 97 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 MRPL35Q9NZE8 188 aaKnown RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 MRPL36Q9P0J6 103 aaKnown RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 TRBV7-1A0A0A6YYK4 115 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 PNMA8CA0A1B0GUJ8 204 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 CPSF4LA6NMK7 179 aaKnown RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 MT-ATP8P03928 68 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 CBLN1P23435 193 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 RHOHQ15669 191 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 Q56UQ5 140 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 VSTM2AQ8TAG5 236 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 PPDPFLQ8WWR9 84 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 DNAH5Q8TE73 4624 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 GYPBP06028 91 aa1.12□□□□□ -2.23
XRN1-210ENST00000472697 PIPP12273 146 aaPredicted RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 LSM3P62310 102 aaKnown RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 PRB3Q04118 309 aaPredicted RBP1.12□□□□□ -2.23
XRN1-210ENST00000472697 TMEM30CPA0ZSE6 113 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 G3V318 75 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 PLGLAQ15195 96 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 C2orf82Q6UX34 121 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 PP632Q6XCG6 107 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 RPS27LQ71UM5 84 aaKnown RBP1.11□□□□□ -2.23
XRN1-210ENST00000472697 V9GYS6 101 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 IGKV3D-7A0A0C4DH55 119 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 TCRBV3S1A0A5B6 114 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 JMJD7-PLA2G4BH0Y9G9 81 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 H3BRM9 83 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 NDUFA4O00483 81 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 NDUFB6O95139 128 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 IFITM1P13164 125 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 MPV17LQ2QL34 196 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 C9orf116Q5BN46 136 aaPredicted RBP1.11□□□□□ -2.23
XRN1-210ENST00000472697 Q6AWC8 147 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 DPH3P1Q9H4G8 78 aa1.11□□□□□ -2.23
XRN1-210ENST00000472697 A0A087WTM6 91 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 HCG22E2RYF7 251 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP12-3P60328 96 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 Q86TA4 180 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 C20orf197Q8N268 126 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 TTC9CQ8N5M4 171 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 LINC00526Q96FQ7 95 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 NAA60Q9H7X0 242 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 YPEL1O60688 119 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 MT1HL1P0DM35 61 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 PDE6GP18545 87 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 ASIPP42127 132 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 RPL37AP61513 92 aaKnown RBP1.1□□□□□ -2.23
XRN1-210ENST00000472697 FXYD3Q14802 87 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 LCE3AQ5TA76 89 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 LINC00846Q9NV44 126 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 IER3IP1Q9Y5U9 82 aa1.1□□□□□ -2.23
XRN1-210ENST00000472697 FAT1Q14517 4588 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 TRAV30A0A087WSZ9 112 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 IFITM5A6NNB3 132 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 M0R143 59 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 CCKP06307 115 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP10-4P60372 401 aaPredicted RBP1.09□□□□□ -2.23
XRN1-210ENST00000472697 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 DNAH8Q96JB1 4490 aa1.09□□□□□ -2.23
XRN1-210ENST00000472697 TNXBP22105 4242 aa1.09□□□□□ -2.24
XRN1-210ENST00000472697 MRPS10P82664 201 aaKnown RBP1.09□□□□□ -2.24
XRN1-210ENST00000472697 TMEM141Q96I45 108 aa1.09□□□□□ -2.24
XRN1-210ENST00000472697 ABRACLQ9P1F3 81 aa1.09□□□□□ -2.24
XRN1-210ENST00000472697 R4GMQ9 66 aa1.09□□□□□ -2.24
XRN1-210ENST00000472697 TRGV2A0A075B6R0 118 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 LINC01600Q96MT4 127 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 CMC2Q9NRP2 79 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 A0A0J9YY99 117 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 hADV29S1A0JD25 119 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 ZNF56Q15929 161 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 SVBPQ8N300 66 aa1.08□□□□□ -2.24
XRN1-210ENST00000472697 NUPR1O60356 82 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 SMR3BP02814 79 aaPredicted RBP1.07□□□□□ -2.24
XRN1-210ENST00000472697 S100A8P05109 93 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 SAA2P0DJI9 122 aaPredicted RBP1.07□□□□□ -2.24
XRN1-210ENST00000472697 LINC01590Q5TEZ4 76 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 ZCCHC13Q8WW36 166 aaKnown RBP1.07□□□□□ -2.24
XRN1-210ENST00000472697 PRO1933Q9H354 126 aa1.07□□□□□ -2.24
XRN1-210ENST00000472697 SAR1AQ9NR31 198 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms