RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
SF3A1-207ENST00000471342 TMEM126AQ9H061 195 aa6.02□□□□□ -1.45
SF3A1-207ENST00000471342 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
SF3A1-207ENST00000471342 LINC00528Q8N1L1 170 aa6.01□□□□□ -1.45
SF3A1-207ENST00000471342 B5MCH6 92 aa6□□□□□ -1.45
SF3A1-207ENST00000471342 RPL28P46779 137 aaKnown RBP6□□□□□ -1.45
SF3A1-207ENST00000471342 LBHQ53QV2 105 aaPredicted RBP6□□□□□ -1.45
SF3A1-207ENST00000471342 Q8N1X5 172 aa6□□□□□ -1.45
SF3A1-207ENST00000471342 Q9BRP9 147 aa6□□□□□ -1.45
SF3A1-207ENST00000471342 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
SF3A1-207ENST00000471342 TRAV13-2A0A0B4J235 113 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 PRYO14603 147 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 ERC2-IT1O76042 136 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 TSPAN13O95857 204 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 NKAPP1Q8N9T2 125 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 SMCR5Q8TEV8 140 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 DPH3Q96FX2 82 aa5.99□□□□□ -1.45
SF3A1-207ENST00000471342 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
SF3A1-207ENST00000471342 ZNF73O43830 326 aaPredicted RBP5.98□□□□□ -1.45
SF3A1-207ENST00000471342 BCE1O60756 84 aa5.98□□□□□ -1.45
SF3A1-207ENST00000471342 RPL13AP40429 203 aaKnown RBP5.98□□□□□ -1.45
SF3A1-207ENST00000471342 C4orf48Q5BLP8 95 aa5.98□□□□□ -1.45
SF3A1-207ENST00000471342 FAM218AQ96MZ4 157 aa5.98□□□□□ -1.45
SF3A1-207ENST00000471342 PRO1854Q9UHT4 67 aa5.98□□□□□ -1.45
SF3A1-207ENST00000471342 PCP4L1A6NKN8 68 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 H0Y9J4 135 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 C6orf99Q4VX62 202 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 REG3GQ6UW15 175 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
SF3A1-207ENST00000471342 A6NDN8 102 aa5.96□□□□□ -1.46
SF3A1-207ENST00000471342 TRIAP1O43715 76 aa5.96□□□□□ -1.46
SF3A1-207ENST00000471342 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
SF3A1-207ENST00000471342 LINC01547P58512 204 aaPredicted RBP5.96□□□□□ -1.46
SF3A1-207ENST00000471342 ELOF1P60002 83 aaKnown RBP5.96□□□□□ -1.46
SF3A1-207ENST00000471342 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
SF3A1-207ENST00000471342 PRLHP81277 87 aa5.95□□□□□ -1.46
SF3A1-207ENST00000471342 C1orf137Q5JT78 98 aa5.95□□□□□ -1.46
SF3A1-207ENST00000471342 Q5VSD8 79 aa5.95□□□□□ -1.46
SF3A1-207ENST00000471342 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 A6NJY4 79 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 M0R143 59 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 ZNF861PO60384 105 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
SF3A1-207ENST00000471342 UBE2BP63146 152 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 S100A7L2Q5SY68 101 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 Q6ZRX8 168 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 OR13C6PQ8NH95 151 aa5.94□□□□□ -1.46
SF3A1-207ENST00000471342 NAA38Q9BRA0 125 aaKnown RBP5.94□□□□□ -1.46
SF3A1-207ENST00000471342 LINC00575Q6W349 94 aa5.92□□□□□ -1.46
SF3A1-207ENST00000471342 RAB37Q96AX2 223 aa5.92□□□□□ -1.46
SF3A1-207ENST00000471342 H7C2G1 150 aa5.91□□□□□ -1.46
SF3A1-207ENST00000471342 BATFQ16520 125 aa5.91□□□□□ -1.46
SF3A1-207ENST00000471342 ST20-AS1Q8NBB2 130 aa5.91□□□□□ -1.46
SF3A1-207ENST00000471342 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
SF3A1-207ENST00000471342 C9orf118A6NHY6 69 aa5.9□□□□□ -1.46
SF3A1-207ENST00000471342 COX7BP24311 80 aa5.9□□□□□ -1.46
SF3A1-207ENST00000471342 FAM19A1Q7Z5A9 133 aa5.9□□□□□ -1.46
SF3A1-207ENST00000471342 SMIM29Q86T20 159 aa5.89□□□□□ -1.47
SF3A1-207ENST00000471342 CLEC2BQ92478 149 aa5.89□□□□□ -1.47
SF3A1-207ENST00000471342 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
SF3A1-207ENST00000471342 INAFM2P0DMQ5 153 aa5.88□□□□□ -1.47
SF3A1-207ENST00000471342 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
SF3A1-207ENST00000471342 SPINK6Q6UWN8 80 aa5.88□□□□□ -1.47
SF3A1-207ENST00000471342 ANAPC11Q9NYG5 84 aa5.88□□□□□ -1.47
SF3A1-207ENST00000471342 IGLV5-48A0A075B6I7 105 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 ETDCA0A1B0GVM5 59 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 TCL1BO95988 128 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 SPRR1BP22528 89 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 COL5A1-AS1Q5SY13 56 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 Q8N377 158 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 SPRR4Q96PI1 79 aa5.87□□□□□ -1.47
SF3A1-207ENST00000471342 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
SF3A1-207ENST00000471342 A0A1W2PPM0 123 aa5.86□□□□□ -1.47
SF3A1-207ENST00000471342 H3BUT2 72 aa5.86□□□□□ -1.47
SF3A1-207ENST00000471342 LST1O00453 97 aa5.86□□□□□ -1.47
SF3A1-207ENST00000471342 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
SF3A1-207ENST00000471342 HERC1Q15751 4861 aa5.86□□□□□ -1.47
SF3A1-207ENST00000471342 A0A087X002 238 aa5.85□□□□□ -1.47
SF3A1-207ENST00000471342 H0YGX0 51 aa5.85□□□□□ -1.47
SF3A1-207ENST00000471342 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
SF3A1-207ENST00000471342 UBE2AP49459 152 aa5.85□□□□□ -1.47
SF3A1-207ENST00000471342 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
SF3A1-207ENST00000471342 HIGD2AQ9BW72 106 aa5.84□□□□□ -1.47
SF3A1-207ENST00000471342 hADV29S1A0JD25 119 aa5.83□□□□□ -1.48
SF3A1-207ENST00000471342 LORP23490 312 aaPredicted RBP5.83□□□□□ -1.48
SF3A1-207ENST00000471342 DHRS4-AS1Q9P1J3 65 aa5.83□□□□□ -1.48
SF3A1-207ENST00000471342 PRO0461Q9UI25 63 aa5.83□□□□□ -1.48
SF3A1-207ENST00000471342 CBY1Q9Y3M2 126 aa5.83□□□□□ -1.48
SF3A1-207ENST00000471342 A0A1B0GX51 115 aa5.82□□□□□ -1.48
SF3A1-207ENST00000471342 Q6ZQY7 126 aa5.82□□□□□ -1.48
SF3A1-207ENST00000471342 LINC01600Q96MT4 127 aa5.82□□□□□ -1.48
SF3A1-207ENST00000471342 TRACP01848 142 aa5.81□□□□□ -1.48
SF3A1-207ENST00000471342 Q1RN00 199 aa5.81□□□□□ -1.48
SF3A1-207ENST00000471342 HMCN2Q8NDA2 5059 aa5.8□□□□□ -1.48
SF3A1-207ENST00000471342 PSMB2P49721 201 aa5.8□□□□□ -1.48
SF3A1-207ENST00000471342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms