RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 FXYD6-FXYD2A0A087WZ82 144 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 TRAV1-1A0A0B4J248 108 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 LEPROTO15243 131 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 CCL25O15444 150 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 IGKV4-1P06312 121 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BOP23527 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BBP33778 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 UBE2D1P51668 147 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BDP58876 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BCP62807 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST2H2BEQ16778 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 C9orf116Q5BN46 136 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.72□□□□□ -1.97
CKS1B-204ENST00000471245 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 NUP35Q8NFH5 326 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BHQ93079 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BNQ99877 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 HIST1H2BMQ99879 126 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
CKS1B-204ENST00000471245 BORCS7-ASMTA0A0B4J1R7 106 aa2.71□□□□□ -1.98
CKS1B-204ENST00000471245 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
CKS1B-204ENST00000471245 OR5A1Q8NGJ0 315 aa2.71□□□□□ -1.98
CKS1B-204ENST00000471245 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
CKS1B-204ENST00000471245 CNFNQ9BYD5 112 aa2.71□□□□□ -1.98
CKS1B-204ENST00000471245 LOC107984640A0A0U1RRK4 108 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 SDHAF1A6NFY7 115 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 NDUFC2O95298 119 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 LGALS3P17931 250 aaKnown RBP2.7□□□□□ -1.98
CKS1B-204ENST00000471245 HIST1H4AP62805 103 aaKnown RBP2.7□□□□□ -1.98
CKS1B-204ENST00000471245 TPRXLQ17RH7 258 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 C9orf62Q8N4C0 152 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 KCNRGQ8N5I3 272 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 OR10D4PQ8NGN7 298 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 FAM213BQ8TBF2 198 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 CDC42SE2Q9NRR3 84 aa2.7□□□□□ -1.98
CKS1B-204ENST00000471245 A0A1W2PNM2 257 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 F2Z2F3 143 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 ARPC5O15511 151 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 NCR2O95944 276 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 TRGC1P0CF51 173 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 POLR2KP53803 58 aaKnown RBP2.69□□□□□ -1.98
CKS1B-204ENST00000471245 EIF5AP63241 154 aaKnown RBP2.69□□□□□ -1.98
CKS1B-204ENST00000471245 MIEN1Q9BRT3 115 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 KRTAP4-1Q9BYQ7 146 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 TMEM242Q9NWH2 141 aa2.69□□□□□ -1.98
CKS1B-204ENST00000471245 TRBV6-5A0A0K0K1A5 114 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 PFDN1O60925 122 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 CRYGAP11844 174 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 ZNF25P17030 456 aaPredicted RBP2.68□□□□□ -1.98
CKS1B-204ENST00000471245 C5orf38Q86SI9 138 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 PLEKHB2Q96CS7 222 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 IMUPQ9GZP8 106 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 GNG13Q9P2W3 67 aa2.68□□□□□ -1.98
CKS1B-204ENST00000471245 UMAD1C9J7I0 102 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 I3L3M4 83 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 GNG4P50150 75 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 SS18Q15532 418 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 Q6ZUT4 128 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 LCA10Q71F78 164 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 Q8NDZ9 215 aa2.67□□□□□ -1.98
CKS1B-204ENST00000471245 TRAV13-1A0A0B4J241 112 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 TRBV27A0A0K0K1C4 114 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 SPAG11BQ08648 103 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 ZNF345Q14585 488 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 UNQ6190/PRO20217Q6UXQ8 127 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 MANBALQ9NQG1 85 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 C6orf48Q9UBA6 75 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 UBE2D4Q9Y2X8 147 aa2.66□□□□□ -1.98
CKS1B-204ENST00000471245 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.99
CKS1B-204ENST00000471245 C7orf77A4D0Y5 90 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 HMSDA8MTL9 139 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 C1orf196B1AJZ1 125 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
CKS1B-204ENST00000471245 RPL39P62891 51 aaKnown RBP2.65□□□□□ -1.99
CKS1B-204ENST00000471245 ASB16-AS1Q495Z4 193 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 EIF5AL1Q6IS14 154 aaKnown RBP2.65□□□□□ -1.99
CKS1B-204ENST00000471245 TSKUQ8WUA8 353 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 ST20Q9HBF5 79 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 BATF3Q9NR55 127 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 MED9Q9NWA0 146 aa2.65□□□□□ -1.99
CKS1B-204ENST00000471245 MRPL35Q9NZE8 188 aaKnown RBP2.65□□□□□ -1.99
CKS1B-204ENST00000471245 C11orf86A6NJI1 115 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 TSTD3H0UI37 97 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 MT1HP80294 61 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 LYRM7Q5U5X0 104 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 TEX261Q6UWH6 196 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 C2orf82Q6UX34 121 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 IMMP2LQ96T52 175 aa2.64□□□□□ -1.99
CKS1B-204ENST00000471245 RPL28P46779 137 aaKnown RBP2.63□□□□□ -1.99
CKS1B-204ENST00000471245 UBE2BP63146 152 aa2.63□□□□□ -1.99
CKS1B-204ENST00000471245 RHEBQ15382 184 aa2.63□□□□□ -1.99
CKS1B-204ENST00000471245 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
CKS1B-204ENST00000471245 TIMM21Q9BVV7 248 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms