RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 CRIP1P50238 77 aa1.78□□□□□ -2.12
PRPF40A-206ENST00000471167 DEFB119Q8N690 84 aa1.78□□□□□ -2.12
PRPF40A-206ENST00000471167 USMG5Q96IX5 58 aa1.78□□□□□ -2.12
PRPF40A-206ENST00000471167 DEPDC5O75140 1603 aa1.77□□□□□ -2.13
PRPF40A-206ENST00000471167 I3L2K1 104 aa1.77□□□□□ -2.13
PRPF40A-206ENST00000471167 PIGYQ3MUY2 71 aa1.77□□□□□ -2.13
PRPF40A-206ENST00000471167 KNTC1P50748 2209 aa1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 ANKRD17O75179 2603 aaKnown RBP1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 LINC01546A6NGU7 62 aa1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 H0YGX0 51 aa1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 FLG2Q5D862 2391 aaPredicted RBP1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 ZDBF2Q9HCK1 2354 aa1.76□□□□□ -2.13
PRPF40A-206ENST00000471167 AHCTF1Q8WYP5 2266 aa1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 TNRC6CQ9HCJ0 1690 aaKnown RBP1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 K7EQZ3 153 aa1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 SPINK4O60575 86 aa1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 LYNX1P0DP58 116 aa1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 DEFB123Q8N688 67 aa1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 MRPL34Q9BQ48 92 aaKnown RBP1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 GOLGA4Q13439 2230 aaKnown RBP1.75□□□□□ -2.13
PRPF40A-206ENST00000471167 CDKN2A-AS1Q9UH64 79 aa1.74□□□□□ -2.13
PRPF40A-206ENST00000471167 NFAT5O94916 1531 aa1.74□□□□□ -2.13
PRPF40A-206ENST00000471167 CDC42BPAQ5VT25 1732 aa1.74□□□□□ -2.13
PRPF40A-206ENST00000471167 DDX60Q8IY21 1712 aaKnown RBP1.74□□□□□ -2.13
PRPF40A-206ENST00000471167 NDUFA3O95167 84 aa1.72□□□□□ -2.13
PRPF40A-206ENST00000471167 CNFNQ9BYD5 112 aa1.72□□□□□ -2.13
PRPF40A-206ENST00000471167 CNTRLQ7Z7A1 2325 aa1.72□□□□□ -2.13
PRPF40A-206ENST00000471167 C4AP0C0L4 1744 aa1.71□□□□□ -2.13
PRPF40A-206ENST00000471167 LINC00158P58513 81 aa1.71□□□□□ -2.14
PRPF40A-206ENST00000471167 ATP7AQ04656 1500 aa1.71□□□□□ -2.14
PRPF40A-206ENST00000471167 CCL22O00626 93 aa1.7□□□□□ -2.14
PRPF40A-206ENST00000471167 COX6B2Q6YFQ2 88 aa1.7□□□□□ -2.14
PRPF40A-206ENST00000471167 Q8IZM0 81 aa1.7□□□□□ -2.14
PRPF40A-206ENST00000471167 COX6A2Q02221 97 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 PRO3102Q9H379 93 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 PRO0255Q9UI72 69 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 KIF21BO75037 1637 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 NAV3Q8IVL0 2385 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 C4BP0C0L5 1744 aa1.69□□□□□ -2.14
PRPF40A-206ENST00000471167 CACNA1EQ15878 2313 aa1.68□□□□□ -2.14
PRPF40A-206ENST00000471167 IQGAP1P46940 1657 aa1.68□□□□□ -2.14
PRPF40A-206ENST00000471167 SPINK9Q5DT21 86 aa1.68□□□□□ -2.14
PRPF40A-206ENST00000471167 LOC730098B7Z3J9 87 aa1.67□□□□□ -2.14
PRPF40A-206ENST00000471167 C10orf95Q9H7T3 257 aa1.67□□□□□ -2.14
PRPF40A-206ENST00000471167 TMEM167BQ9NRX6 74 aa1.67□□□□□ -2.14
PRPF40A-206ENST00000471167 J3QKU1 62 aa1.66□□□□□ -2.14
PRPF40A-206ENST00000471167 FAM208BQ5VWN6 2430 aa1.66□□□□□ -2.14
PRPF40A-206ENST00000471167 SAMD9LQ8IVG5 1584 aa1.65□□□□□ -2.15
PRPF40A-206ENST00000471167 JMJD1CQ15652 2540 aa1.65□□□□□ -2.15
PRPF40A-206ENST00000471167 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.65□□□□□ -2.158e-8■□□□□ 8.9
PRPF40A-206ENST00000471167 LINC00308Q8TCZ7 52 aa1.65□□□□□ -2.15
PRPF40A-206ENST00000471167 LYNX1G3V0Z9 82 aa1.64□□□□□ -2.15
PRPF40A-206ENST00000471167 LMO7Q8WWI1 1683 aa1.64□□□□□ -2.15
PRPF40A-206ENST00000471167 CNOT1A5YKK6 2376 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-206ENST00000471167 SNRPGP62308 76 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-206ENST00000471167 H0YAA0 97 aa1.62□□□□□ -2.15
PRPF40A-206ENST00000471167 LELP1Q5T871 98 aa1.62□□□□□ -2.15
PRPF40A-206ENST00000471167 Q6ZSA8 131 aa1.62□□□□□ -2.15
PRPF40A-206ENST00000471167 PRB3Q04118 309 aaPredicted RBP1.61□□□□□ -2.15
PRPF40A-206ENST00000471167 MINOS1Q5TGZ0 78 aa1.61□□□□□ -2.15
PRPF40A-206ENST00000471167 APLNQ9ULZ1 77 aa1.61□□□□□ -2.15
PRPF40A-206ENST00000471167 DOPEY2Q9Y3R5 2298 aa1.61□□□□□ -2.15
PRPF40A-206ENST00000471167 TENM1Q9UKZ4 2725 aa1.6□□□□□ -2.15
PRPF40A-206ENST00000471167 SPRR1AP35321 89 aa1.6□□□□□ -2.15
PRPF40A-206ENST00000471167 TFF3Q07654 80 aa1.59□□□□□ -2.15
PRPF40A-206ENST00000471167 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.16
PRPF40A-206ENST00000471167 A0A0D9SG42 100 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 H1FX-AS1Q4G0G2 97 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 Q5VSD8 79 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 C6orf48Q9UBA6 75 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 MROH2BQ7Z745 1585 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 BPTFQ12830 3046 aa1.58□□□□□ -2.16
PRPF40A-206ENST00000471167 DEFB105AQ8NG35 78 aa1.57□□□□□ -2.16
PRPF40A-206ENST00000471167 RP1L1Q8IWN7 2480 aaPredicted RBP1.56□□□□□ -2.16
PRPF40A-206ENST00000471167 WFDC13Q8IUB5 93 aa1.56□□□□□ -2.16
PRPF40A-206ENST00000471167 SMIM2Q9BVW6 85 aa1.56□□□□□ -2.16
PRPF40A-206ENST00000471167 PLCE1Q9P212 2302 aa1.55□□□□□ -2.16
PRPF40A-206ENST00000471167 DUOX1Q9NRD9 1551 aa1.55□□□□□ -2.16
PRPF40A-206ENST00000471167 IAPPP10997 89 aa1.54□□□□□ -2.16
PRPF40A-206ENST00000471167 SPRR1BP22528 89 aa1.54□□□□□ -2.16
PRPF40A-206ENST00000471167 PTPRZ1P23471 2315 aaPredicted RBP1.52□□□□□ -2.17
PRPF40A-206ENST00000471167 PTPRQQ9UMZ3 2332 aa1.52□□□□□ -2.17
PRPF40A-206ENST00000471167 DEFB130BP0DP73 79 aa1.52□□□□□ -2.17
PRPF40A-206ENST00000471167 DEFB130AP0DP74 79 aa1.52□□□□□ -2.17
PRPF40A-206ENST00000471167 ROS1P08922 2347 aa1.51□□□□□ -2.17
PRPF40A-206ENST00000471167 USF3Q68DE3 2245 aa1.51□□□□□ -2.17
PRPF40A-206ENST00000471167 NDUFA1O15239 70 aa1.51□□□□□ -2.17
PRPF40A-206ENST00000471167 RPS27P42677 84 aaKnown RBP1.5□□□□□ -2.17
PRPF40A-206ENST00000471167 KLK9Q2XQG4 91 aa1.5□□□□□ -2.17
PRPF40A-206ENST00000471167 RPS27LQ71UM5 84 aaKnown RBP1.5□□□□□ -2.17
PRPF40A-206ENST00000471167 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
PRPF40A-206ENST00000471167 PIEZO2Q9H5I5 2752 aa1.49□□□□□ -2.17
PRPF40A-206ENST00000471167 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
PRPF40A-206ENST00000471167 KRTAP21-3Q3LHN1 58 aa1.47□□□□□ -2.17
PRPF40A-206ENST00000471167 GCC2Q8IWJ2 1684 aa1.47□□□□□ -2.17
PRPF40A-206ENST00000471167 C2CD3Q4AC94 2353 aa1.45□□□□□ -2.18
PRPF40A-206ENST00000471167 WFDC10BQ8IUB3 73 aa1.44□□□□□ -2.18
PRPF40A-206ENST00000471167 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
PRPF40A-206ENST00000471167 WT1-ASQ06250 92 aa1.43□□□□□ -2.18
PRPF40A-206ENST00000471167 WNK2Q9Y3S1 2297 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms