RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
COL9A3-209ENST00000469852 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
COL9A3-209ENST00000469852 KRTAP4-16G5E9R7 235 aaPredicted RBP8.99□□□□□ -0.97
COL9A3-209ENST00000469852 PRLHP81277 87 aa8.99□□□□□ -0.97
COL9A3-209ENST00000469852 TAL2Q16559 108 aa8.99□□□□□ -0.97
COL9A3-209ENST00000469852 CEND1Q8N111 149 aa8.99□□□□□ -0.97
COL9A3-209ENST00000469852 FXYD2P54710 66 aa8.98□□□□□ -0.97
COL9A3-209ENST00000469852 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
COL9A3-209ENST00000469852 A6NDN8 102 aa8.97□□□□□ -0.97
COL9A3-209ENST00000469852 ZNF861PO60384 105 aa8.97□□□□□ -0.97
COL9A3-209ENST00000469852 HSD52Q0P140 79 aa8.97□□□□□ -0.97
COL9A3-209ENST00000469852 UBE2AP49459 152 aa8.96□□□□□ -0.98
COL9A3-209ENST00000469852 SPINK6Q6UWN8 80 aa8.96□□□□□ -0.98
COL9A3-209ENST00000469852 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
COL9A3-209ENST00000469852 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
COL9A3-209ENST00000469852 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
COL9A3-209ENST00000469852 CFC1P0CG37 223 aa8.95□□□□□ -0.98
COL9A3-209ENST00000469852 ETDCA0A1B0GVM5 59 aa8.94□□□□□ -0.98
COL9A3-209ENST00000469852 B5MCH6 92 aa8.94□□□□□ -0.98
COL9A3-209ENST00000469852 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
COL9A3-209ENST00000469852 H0Y9J4 135 aa8.93□□□□□ -0.98
COL9A3-209ENST00000469852 RPL13AP40429 203 aaKnown RBP8.92□□□□□ -0.98
COL9A3-209ENST00000469852 SMIM11BQ8TCY0 68 aa8.92□□□□□ -0.98
COL9A3-209ENST00000469852 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
COL9A3-209ENST00000469852 CTAG1AP78358 180 aa8.91□□□□□ -0.98
COL9A3-209ENST00000469852 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
COL9A3-209ENST00000469852 DIRC1Q969H9 104 aa8.91□□□□□ -0.98
COL9A3-209ENST00000469852 Q9BRP9 147 aa8.91□□□□□ -0.98
COL9A3-209ENST00000469852 A0A0B4J2C4 111 aa8.9□□□□□ -0.98
COL9A3-209ENST00000469852 Q6ZRX8 168 aa8.9□□□□□ -0.98
COL9A3-209ENST00000469852 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.98
COL9A3-209ENST00000469852 HIGD2AQ9BW72 106 aa8.9□□□□□ -0.98
COL9A3-209ENST00000469852 K7ERJ3 54 aa8.89□□□□□ -0.99
COL9A3-209ENST00000469852 BVES-AS1Q5T3Y7 98 aa8.89□□□□□ -0.99
COL9A3-209ENST00000469852 RAB37Q96AX2 223 aa8.89□□□□□ -0.99
COL9A3-209ENST00000469852 NHP2Q9NX24 153 aaKnown RBP8.89□□□□□ -0.99
COL9A3-209ENST00000469852 CBY1Q9Y3M2 126 aa8.89□□□□□ -0.99
COL9A3-209ENST00000469852 TMEM238LA0A1B0GVL6 79 aa8.88□□□□□ -0.99
COL9A3-209ENST00000469852 A6NJY4 79 aa8.88□□□□□ -0.99
COL9A3-209ENST00000469852 H7C2G1 150 aa8.88□□□□□ -0.99
COL9A3-209ENST00000469852 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
COL9A3-209ENST00000469852 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
COL9A3-209ENST00000469852 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
COL9A3-209ENST00000469852 ELOF1P60002 83 aaKnown RBP8.87□□□□□ -0.99
COL9A3-209ENST00000469852 TNXBP22105 4242 aa8.86□□□□□ -0.99
COL9A3-209ENST00000469852 A0A1B0GWB2 263 aa8.86□□□□□ -0.99
COL9A3-209ENST00000469852 COX7BP24311 80 aa8.86□□□□□ -0.99
COL9A3-209ENST00000469852 ANAPC11Q9NYG5 84 aa8.85□□□□□ -0.99
COL9A3-209ENST00000469852 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
COL9A3-209ENST00000469852 TRBV7-6A0A0J9YX20 115 aa8.84□□□□□ -0.99
COL9A3-209ENST00000469852 J3QL48 77 aa8.83□□□□□ -1
COL9A3-209ENST00000469852 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
COL9A3-209ENST00000469852 LINC01600Q96MT4 127 aa8.82□□□□□ -1
COL9A3-209ENST00000469852 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
COL9A3-209ENST00000469852 SPRR4Q96PI1 79 aa8.81□□□□□ -1
COL9A3-209ENST00000469852 M0R143 59 aa8.8□□□□□ -1
COL9A3-209ENST00000469852 OXTP01178 125 aa8.8□□□□□ -1
COL9A3-209ENST00000469852 MT1HL1P0DM35 61 aa8.8□□□□□ -1
COL9A3-209ENST00000469852 Q1RN00 199 aa8.8□□□□□ -1
COL9A3-209ENST00000469852 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
COL9A3-209ENST00000469852 A0A087X002 238 aa8.79□□□□□ -1
COL9A3-209ENST00000469852 TSPAN13O95857 204 aa8.79□□□□□ -1
COL9A3-209ENST00000469852 DHRS4-AS1Q9P1J3 65 aa8.79□□□□□ -1
COL9A3-209ENST00000469852 TRIAP1O43715 76 aa8.78□□□□□ -1
COL9A3-209ENST00000469852 BATFQ16520 125 aa8.77□□□□□ -1.01
COL9A3-209ENST00000469852 LINC00575Q6W349 94 aa8.77□□□□□ -1.01
COL9A3-209ENST00000469852 KRTAP10-8P60410 259 aa8.76□□□□□ -1.01
COL9A3-209ENST00000469852 VAMP3Q15836 100 aa8.76□□□□□ -1.01
COL9A3-209ENST00000469852 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
COL9A3-209ENST00000469852 FAM218AQ96MZ4 157 aa8.76□□□□□ -1.01
COL9A3-209ENST00000469852 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
COL9A3-209ENST00000469852 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
COL9A3-209ENST00000469852 HMCN2Q8NDA2 5059 aa8.75□□□□□ -1.01
COL9A3-209ENST00000469852 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
COL9A3-209ENST00000469852 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
COL9A3-209ENST00000469852 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
COL9A3-209ENST00000469852 hADV29S1A0JD25 119 aa8.72□□□□□ -1.01
COL9A3-209ENST00000469852 CRYGAP11844 174 aa8.72□□□□□ -1.01
COL9A3-209ENST00000469852 PSMB2P49721 201 aa8.72□□□□□ -1.01
COL9A3-209ENST00000469852 C3orf22Q8N5N4 141 aa8.72□□□□□ -1.01
COL9A3-209ENST00000469852 NAA38Q9BRA0 125 aaKnown RBP8.72□□□□□ -1.01
COL9A3-209ENST00000469852 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
COL9A3-209ENST00000469852 CLEC2BQ92478 149 aa8.71□□□□□ -1.02
COL9A3-209ENST00000469852 H0YGX0 51 aa8.7□□□□□ -1.02
COL9A3-209ENST00000469852 SLC25A20O43772 301 aa8.7□□□□□ -1.02
COL9A3-209ENST00000469852 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
COL9A3-209ENST00000469852 SNHG12Q9BXW3 62 aa8.7□□□□□ -1.02
COL9A3-209ENST00000469852 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
COL9A3-209ENST00000469852 SPRR1BP22528 89 aa8.69□□□□□ -1.02
COL9A3-209ENST00000469852 Q6ZQY7 126 aa8.69□□□□□ -1.02
COL9A3-209ENST00000469852 IGLV5-48A0A075B6I7 105 aa8.68□□□□□ -1.02
COL9A3-209ENST00000469852 Q8N377 158 aa8.67□□□□□ -1.02
COL9A3-209ENST00000469852 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
COL9A3-209ENST00000469852 IGLV9-49A0A0B4J1Y8 123 aa8.66□□□□□ -1.02
COL9A3-209ENST00000469852 SMIM29Q86T20 159 aa8.66□□□□□ -1.02
COL9A3-209ENST00000469852 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
COL9A3-209ENST00000469852 TAX1BP3O14907 124 aa8.65□□□□□ -1.02
COL9A3-209ENST00000469852 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.65□□□□□ -1.02
COL9A3-209ENST00000469852 COX6CP09669 75 aa8.64□□□□□ -1.03
COL9A3-209ENST00000469852 MOBPQ13875 183 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms