RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 RPL37P61927 97 aaKnown RBP9.68□□□□□ -0.86
TTC28-205ENST00000469670 LOC107984156A0A0G2JMH3 177 aa9.67□□□□□ -0.86
TTC28-205ENST00000469670 ARL17AQ8IVW1 177 aa9.67□□□□□ -0.86
TTC28-205ENST00000469670 C18orf32Q8TCD1 76 aa9.67□□□□□ -0.86
TTC28-205ENST00000469670 USH2AO75445 5202 aa9.67□□□□□ -0.86
TTC28-205ENST00000469670 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
TTC28-205ENST00000469670 C5orf52A6NGY3 159 aa9.66□□□□□ -0.86
TTC28-205ENST00000469670 S100A7L2Q5SY68 101 aa9.66□□□□□ -0.86
TTC28-205ENST00000469670 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
TTC28-205ENST00000469670 TRAV23DV6A0A075B6W5 121 aa9.65□□□□□ -0.86
TTC28-205ENST00000469670 TRGC2P03986 189 aa9.64□□□□□ -0.87
TTC28-205ENST00000469670 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
TTC28-205ENST00000469670 ZNF73O43830 326 aaPredicted RBP9.63□□□□□ -0.87
TTC28-205ENST00000469670 TRAPPC1Q9Y5R8 145 aa9.63□□□□□ -0.87
TTC28-205ENST00000469670 SPRR1BP22528 89 aa9.62□□□□□ -0.87
TTC28-205ENST00000469670 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
TTC28-205ENST00000469670 MIEN1Q9BRT3 115 aa9.6□□□□□ -0.87
TTC28-205ENST00000469670 LAMTOR3Q9UHA4 124 aa9.6□□□□□ -0.87
TTC28-205ENST00000469670 NDUFC2O95298 119 aa9.59□□□□□ -0.87
TTC28-205ENST00000469670 CD164Q04900 197 aa9.59□□□□□ -0.87
TTC28-205ENST00000469670 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
TTC28-205ENST00000469670 H7C2G1 150 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BKO60814 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BJP06899 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BOP23527 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BBP33778 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BDP58876 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 TSPEAR-AS2P59090 65 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BCP62807 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST2H2BEQ16778 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BHQ93079 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BNQ99877 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 HIST1H2BMQ99879 126 aa9.58□□□□□ -0.88
TTC28-205ENST00000469670 CFC1P0CG37 223 aa9.57□□□□□ -0.88
TTC28-205ENST00000469670 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
TTC28-205ENST00000469670 C1orf195Q5TG92 126 aa9.57□□□□□ -0.88
TTC28-205ENST00000469670 S100A6P06703 90 aa9.56□□□□□ -0.88
TTC28-205ENST00000469670 Q6Q795 121 aa9.56□□□□□ -0.88
TTC28-205ENST00000469670 Q5XG85 94 aa9.55□□□□□ -0.88
TTC28-205ENST00000469670 FCGBPQ9Y6R7 5405 aaPredicted RBP9.55□□□□□ -0.88
TTC28-205ENST00000469670 PRO1933Q9H354 126 aa9.54□□□□□ -0.88
TTC28-205ENST00000469670 LOC105371267A0A1B0GV96 52 aa9.53□□□□□ -0.88
TTC28-205ENST00000469670 LEPROTO15243 131 aa9.53□□□□□ -0.88
TTC28-205ENST00000469670 SNRPEP62304 92 aaKnown RBP9.53□□□□□ -0.88
TTC28-205ENST00000469670 KRTAP9-8Q9BYQ0 159 aa9.52□□□□□ -0.89
TTC28-205ENST00000469670 DHRS4-AS1Q9P1J3 65 aa9.52□□□□□ -0.89
TTC28-205ENST00000469670 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
TTC28-205ENST00000469670 Q1RN00 199 aa9.51□□□□□ -0.89
TTC28-205ENST00000469670 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
TTC28-205ENST00000469670 SOSTDC1Q6X4U4 206 aa9.51□□□□□ -0.89
TTC28-205ENST00000469670 NPC2P61916 151 aa9.5□□□□□ -0.89
TTC28-205ENST00000469670 J3QQQ9 107 aa9.49□□□□□ -0.89
TTC28-205ENST00000469670 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
TTC28-205ENST00000469670 SMIM29Q86T20 159 aa9.49□□□□□ -0.89
TTC28-205ENST00000469670 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
TTC28-205ENST00000469670 NMUP48645 174 aa9.47□□□□□ -0.89
TTC28-205ENST00000469670 AKR1D1P51857 326 aa9.47□□□□□ -0.89
TTC28-205ENST00000469670 TAL2Q16559 108 aa9.47□□□□□ -0.89
TTC28-205ENST00000469670 DEFB105AQ8NG35 78 aa9.47□□□□□ -0.89
TTC28-205ENST00000469670 H0Y8G0 127 aa9.46□□□□□ -0.9
TTC28-205ENST00000469670 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
TTC28-205ENST00000469670 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
TTC28-205ENST00000469670 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
TTC28-205ENST00000469670 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
TTC28-205ENST00000469670 A0A0G2JQZ4 141 aa9.43□□□□□ -0.9
TTC28-205ENST00000469670 TEX49A0A1B0GTD5 131 aa9.43□□□□□ -0.9
TTC28-205ENST00000469670 S100A2P29034 98 aa9.43□□□□□ -0.9
TTC28-205ENST00000469670 KRTAP19-1Q8IUB9 90 aa9.43□□□□□ -0.9
TTC28-205ENST00000469670 SERF1AO75920 110 aa9.42□□□□□ -0.9
TTC28-205ENST00000469670 ELOF1P60002 83 aaKnown RBP9.42□□□□□ -0.9
TTC28-205ENST00000469670 COX7BP24311 80 aa9.41□□□□□ -0.9
TTC28-205ENST00000469670 LINC00310P59036 64 aa9.41□□□□□ -0.9
TTC28-205ENST00000469670 HERVK_113P61574 105 aa9.41□□□□□ -0.9
TTC28-205ENST00000469670 PLNP26678 52 aa9.4□□□□□ -0.9
TTC28-205ENST00000469670 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
TTC28-205ENST00000469670 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
TTC28-205ENST00000469670 ATP11AUNQ6ZP68 121 aa9.39□□□□□ -0.91
TTC28-205ENST00000469670 HSBP1O75506 76 aa9.38□□□□□ -0.91
TTC28-205ENST00000469670 TCL1BO95988 128 aa9.38□□□□□ -0.91
TTC28-205ENST00000469670 FABP4P15090 132 aa9.38□□□□□ -0.91
TTC28-205ENST00000469670 SPANXCQ9NY87 97 aa9.38□□□□□ -0.91
TTC28-205ENST00000469670 C6orf99Q4VX62 202 aa9.37□□□□□ -0.91
TTC28-205ENST00000469670 C20orf202A1L168 122 aa9.36□□□□□ -0.91
TTC28-205ENST00000469670 SPANXDQ9BXN6 97 aa9.36□□□□□ -0.91
TTC28-205ENST00000469670 DPM2O94777 84 aa9.35□□□□□ -0.91
TTC28-205ENST00000469670 Q75L30 129 aa9.35□□□□□ -0.91
TTC28-205ENST00000469670 LINC00308Q8TCZ7 52 aa9.35□□□□□ -0.91
TTC28-205ENST00000469670 LCE2BO14633 110 aa9.34□□□□□ -0.91
TTC28-205ENST00000469670 SYNE2Q8WXH0 6885 aaKnown RBP9.34□□□□□ -0.91
TTC28-205ENST00000469670 LEPROTL1O95214 131 aa9.33□□□□□ -0.92
TTC28-205ENST00000469670 MT2AP02795 61 aa9.33□□□□□ -0.92
TTC28-205ENST00000469670 PCP2Q8IVA1 136 aa9.33□□□□□ -0.92
TTC28-205ENST00000469670 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
TTC28-205ENST00000469670 MACF1Q9UPN3 7388 aaKnown RBP9.32□□□□□ -0.92
TTC28-205ENST00000469670 IGLV5-48A0A075B6I7 105 aa9.32□□□□□ -0.92
TTC28-205ENST00000469670 IGKCP01834 107 aa9.32□□□□□ -0.92
TTC28-205ENST00000469670 OBSCN-AS1Q96MR7 158 aa9.31□□□□□ -0.92
TTC28-205ENST00000469670 LITAFQ99732 161 aa9.3□□□□□ -0.92
TTC28-205ENST00000469670 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms