RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 TRBV6-1A0A0K0K1D8 114 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV10-2A0A0K0K1G8 114 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 J3QQQ9 107 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 LGALS3P17931 250 aaKnown RBP1.88□□□□□ -2.11
GPNMB-207ENST00000468723 GNG4P50150 75 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 RAB4BP61018 213 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 OSTCQ9NRP0 149 aa1.88□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV25-1A0A075B6N4 114 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 IGHV1-24A0A0C4DH33 117 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 HMSDA8MTL9 139 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 NCR2O95944 276 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 TRGC1P0CF51 173 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 IGLC6P0CF74 106 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 ZNF345Q14585 488 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.87□□□□□ -2.11
GPNMB-207ENST00000468723 MANBALQ9NQG1 85 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
GPNMB-207ENST00000468723 FLG2Q5D862 2391 aaPredicted RBP1.86□□□□□ -2.11
GPNMB-207ENST00000468723 A0A087WWC5 75 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 A0A0G2JQZ4 141 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 UMAD1C9J7I0 102 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 M0QY20 66 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 BCL2P10415 239 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 RPL37AP61513 92 aaKnown RBP1.86□□□□□ -2.11
GPNMB-207ENST00000468723 EIF5AP63241 154 aaKnown RBP1.86□□□□□ -2.11
GPNMB-207ENST00000468723 ELOBQ15370 118 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 KRTAP26-1Q6PEX3 210 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 C9orf62Q8N4C0 152 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 OR5A1Q8NGJ0 315 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 AP1S3Q96PC3 154 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 TMEM70Q9BUB7 260 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 IMUPQ9GZP8 106 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 DPH3P1Q9H4G8 78 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 TMEM242Q9NWH2 141 aa1.86□□□□□ -2.11
GPNMB-207ENST00000468723 LRP1Q07954 4544 aaKnown RBP1.86□□□□□ -2.11
GPNMB-207ENST00000468723 TRBV10-1A0A0K0K1A3 114 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 CRYGAP11844 174 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 FXYD2P54710 66 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 COX6A2Q02221 97 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 Q0VG73 95 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 ADIRFQ15847 76 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 TIMM21Q9BVV7 248 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 NIT2Q9NQR4 276 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 HERC1Q15751 4861 aa1.85□□□□□ -2.11
GPNMB-207ENST00000468723 TNXBP22105 4242 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 A0A096LNI7 61 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TRAV1-1A0A0B4J248 108 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 ZNF727A8MUV8 499 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 K7EP13 123 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 CCL25O15444 150 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 KRTAP10-4P60372 401 aaPredicted RBP1.84□□□□□ -2.11
GPNMB-207ENST00000468723 NDUFA5Q16718 116 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TPRXLQ17RH7 258 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 EIF5AL1Q6IS14 154 aaKnown RBP1.84□□□□□ -2.11
GPNMB-207ENST00000468723 MRPL54Q6P161 138 aaKnown RBP1.84□□□□□ -2.11
GPNMB-207ENST00000468723 C5orf38Q86SI9 138 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TCTE3Q8IZS6 198 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 HIST1H2BLQ99880 126 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 SMIM7Q9BQ49 75 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TCEAL7Q9BRU2 100 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 ST20Q9HBF5 79 aa1.84□□□□□ -2.11
GPNMB-207ENST00000468723 TRAV13-1A0A0B4J241 112 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 LINC00959A0A1B0GUT2 108 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 HIGD1CA8MV81 97 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 F2Z2F3 143 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 I3L3M4 83 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 TCL1BO95988 128 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 CXCL1P09341 107 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 FCER1GP30273 86 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 RPL39P62891 51 aaKnown RBP1.83□□□□□ -2.12
GPNMB-207ENST00000468723 IQCJQ1A5X6 159 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 Q6ZSA8 131 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 C9orf163Q8N9P6 203 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 NUP35Q8NFH5 326 aa1.83□□□□□ -2.12
GPNMB-207ENST00000468723 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 PKIAP61925 76 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 Q6ZUT4 128 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 PHF5AQ7RTV0 110 aaKnown RBP1.82□□□□□ -2.12
GPNMB-207ENST00000468723 TSKUQ8WUA8 353 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 CARD19Q96LW7 228 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 V9GYV3 84 aa1.82□□□□□ -2.12
GPNMB-207ENST00000468723 UBR4Q5T4S7 5183 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.81□□□□□ -2.12
GPNMB-207ENST00000468723 C7orf77A4D0Y5 90 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 D6R8Y8 96 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 TMEM256-PLSCR3K7ERE1 68 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 M0R378 163 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 CKS2P33552 79 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
GPNMB-207ENST00000468723 Q6ZQT0 140 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 PLEKHB2Q96CS7 222 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 TMEM191AQ9H0A3 160 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 CDC42SE2Q9NRR3 84 aa1.81□□□□□ -2.12
GPNMB-207ENST00000468723 HMCN2Q8NDA2 5059 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 IGHV1-58A0A0C4DH39 117 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
GPNMB-207ENST00000468723 CNBPP62633 177 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms