RNA–Protein interactions for RNA: ENST00000468454.1

PTPRN-212, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 3

Gene PTPRN, Length 504 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-212ENST00000468454 MIEN1Q9BRT3 115 aa7.74□□□□□ -1.17
PTPRN-212ENST00000468454 TMEM218A2RU14 115 aa7.73□□□□□ -1.17
PTPRN-212ENST00000468454 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
PTPRN-212ENST00000468454 NDUFC2O95298 119 aa7.73□□□□□ -1.17
PTPRN-212ENST00000468454 UQCC3Q6UW78 93 aa7.73□□□□□ -1.17
PTPRN-212ENST00000468454 SPRR1BP22528 89 aa7.72□□□□□ -1.17
PTPRN-212ENST00000468454 HINT1P49773 126 aaPredicted RBP7.72□□□□□ -1.17
PTPRN-212ENST00000468454 IFITM2Q01629 132 aa7.72□□□□□ -1.17
PTPRN-212ENST00000468454 TRAPPC1Q9Y5R8 145 aa7.72□□□□□ -1.17
PTPRN-212ENST00000468454 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
PTPRN-212ENST00000468454 CD164Q04900 197 aa7.71□□□□□ -1.18
PTPRN-212ENST00000468454 COMMD7Q86VX2 200 aa7.71□□□□□ -1.18
PTPRN-212ENST00000468454 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
PTPRN-212ENST00000468454 LAMTOR3Q9UHA4 124 aa7.71□□□□□ -1.18
PTPRN-212ENST00000468454 CBY1Q9Y3M2 126 aa7.71□□□□□ -1.18
PTPRN-212ENST00000468454 KRTAP9-8Q9BYQ0 159 aa7.7□□□□□ -1.18
PTPRN-212ENST00000468454 CLLU1Q5K131 121 aa7.69□□□□□ -1.18
PTPRN-212ENST00000468454 Q5XG85 94 aa7.67□□□□□ -1.18
PTPRN-212ENST00000468454 LEPROTO15243 131 aa7.66□□□□□ -1.18
PTPRN-212ENST00000468454 CHCHD1Q96BP2 118 aaKnown RBP7.66□□□□□ -1.18
PTPRN-212ENST00000468454 PRO1933Q9H354 126 aa7.66□□□□□ -1.18
PTPRN-212ENST00000468454 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
PTPRN-212ENST00000468454 LCE2BO14633 110 aa7.65□□□□□ -1.18
PTPRN-212ENST00000468454 NMUP48645 174 aa7.65□□□□□ -1.18
PTPRN-212ENST00000468454 TSPEAR-AS2P59090 65 aa7.65□□□□□ -1.18
PTPRN-212ENST00000468454 RHEBQ15382 184 aa7.65□□□□□ -1.18
PTPRN-212ENST00000468454 RPS10P5Q9NQ39 176 aa7.65□□□□□ -1.18
PTPRN-212ENST00000468454 H7C2G1 150 aa7.64□□□□□ -1.19
PTPRN-212ENST00000468454 CFC1P0CG37 223 aa7.64□□□□□ -1.19
PTPRN-212ENST00000468454 J3QQQ9 107 aa7.63□□□□□ -1.19
PTPRN-212ENST00000468454 C1orf195Q5TG92 126 aa7.63□□□□□ -1.19
PTPRN-212ENST00000468454 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
PTPRN-212ENST00000468454 PLNP26678 52 aa7.6□□□□□ -1.19
PTPRN-212ENST00000468454 AKR1D1P51857 326 aa7.6□□□□□ -1.19
PTPRN-212ENST00000468454 HERVK_113P61574 105 aa7.6□□□□□ -1.19
PTPRN-212ENST00000468454 TAL2Q16559 108 aa7.6□□□□□ -1.19
PTPRN-212ENST00000468454 NEBP20929 6669 aa7.59□□□□□ -1.19
PTPRN-212ENST00000468454 Q1RN00 199 aa7.59□□□□□ -1.19
PTPRN-212ENST00000468454 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
PTPRN-212ENST00000468454 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 H0Y8G0 127 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 NPC2P61916 151 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 C10orf91Q5T1B1 145 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 Q6Q795 121 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
PTPRN-212ENST00000468454 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
PTPRN-212ENST00000468454 HSBP1O75506 76 aa7.57□□□□□ -1.2
PTPRN-212ENST00000468454 DEFB105AQ8NG35 78 aa7.57□□□□□ -1.2
PTPRN-212ENST00000468454 OR13C6PQ8NH95 151 aa7.57□□□□□ -1.2
PTPRN-212ENST00000468454 ELOF1P60002 83 aaKnown RBP7.56□□□□□ -1.2
PTPRN-212ENST00000468454 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
PTPRN-212ENST00000468454 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
PTPRN-212ENST00000468454 COX7BP24311 80 aa7.55□□□□□ -1.2
PTPRN-212ENST00000468454 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
PTPRN-212ENST00000468454 DPM2O94777 84 aa7.54□□□□□ -1.2
PTPRN-212ENST00000468454 TCL1BO95988 128 aa7.54□□□□□ -1.2
PTPRN-212ENST00000468454 KRTAP6-3Q3LI67 103 aa7.54□□□□□ -1.2
PTPRN-212ENST00000468454 SPANXDQ9BXN6 97 aa7.54□□□□□ -1.2
PTPRN-212ENST00000468454 LEPROTL1O95214 131 aa7.53□□□□□ -1.2
PTPRN-212ENST00000468454 ATP11AUNQ6ZP68 121 aa7.53□□□□□ -1.2
PTPRN-212ENST00000468454 IGKCP01834 107 aa7.51□□□□□ -1.21
PTPRN-212ENST00000468454 MT2AP02795 61 aa7.51□□□□□ -1.21
PTPRN-212ENST00000468454 C6orf99Q4VX62 202 aa7.51□□□□□ -1.21
PTPRN-212ENST00000468454 LINC00308Q8TCZ7 52 aa7.51□□□□□ -1.21
PTPRN-212ENST00000468454 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
PTPRN-212ENST00000468454 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
PTPRN-212ENST00000468454 HSPB8Q9UJY1 196 aa7.49□□□□□ -1.21
PTPRN-212ENST00000468454 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
PTPRN-212ENST00000468454 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
PTPRN-212ENST00000468454 C20orf202A1L168 122 aa7.48□□□□□ -1.21
PTPRN-212ENST00000468454 Q75L30 129 aa7.48□□□□□ -1.21
PTPRN-212ENST00000468454 E9PLD3 99 aa7.47□□□□□ -1.21
PTPRN-212ENST00000468454 MT1FP04733 61 aa7.47□□□□□ -1.21
PTPRN-212ENST00000468454 PMCHL2Q9BQD1 86 aa7.47□□□□□ -1.21
PTPRN-212ENST00000468454 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
PTPRN-212ENST00000468454 TIMM17BO60830 172 aa7.46□□□□□ -1.22
PTPRN-212ENST00000468454 LITAFQ99732 161 aa7.46□□□□□ -1.22
PTPRN-212ENST00000468454 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
PTPRN-212ENST00000468454 SNAPINO95295 136 aa7.45□□□□□ -1.22
PTPRN-212ENST00000468454 PCP2Q8IVA1 136 aa7.45□□□□□ -1.22
PTPRN-212ENST00000468454 APOC3P02656 99 aa7.43□□□□□ -1.22
PTPRN-212ENST00000468454 SVBPQ8N300 66 aa7.43□□□□□ -1.22
PTPRN-212ENST00000468454 OBSCN-AS1Q96MR7 158 aa7.43□□□□□ -1.22
PTPRN-212ENST00000468454 MUC12Q9UKN1 5478 aa7.42□□□□□ -1.22
PTPRN-212ENST00000468454 SERF1AO75920 110 aa7.42□□□□□ -1.22
PTPRN-212ENST00000468454 FABP4P15090 132 aa7.42□□□□□ -1.22
PTPRN-212ENST00000468454 YPEL4Q96NS1 127 aa7.42□□□□□ -1.22
PTPRN-212ENST00000468454 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
PTPRN-212ENST00000468454 A4D1N5 150 aa7.41□□□□□ -1.22
PTPRN-212ENST00000468454 NDUFA5Q16718 116 aa7.41□□□□□ -1.22
PTPRN-212ENST00000468454 KRTAP19-6Q3LI70 58 aa7.41□□□□□ -1.22
PTPRN-212ENST00000468454 F8WEM9 126 aa7.4□□□□□ -1.22
PTPRN-212ENST00000468454 LINC00310P59036 64 aa7.4□□□□□ -1.22
PTPRN-212ENST00000468454 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
PTPRN-212ENST00000468454 TRBV7-7A0A0K0K1E9 115 aa7.36□□□□□ -1.23
PTPRN-212ENST00000468454 A6NJY4 79 aa7.36□□□□□ -1.23
PTPRN-212ENST00000468454 ZNF815PA8K554 130 aa7.36□□□□□ -1.23
PTPRN-212ENST00000468454 TRGC2P03986 189 aa7.36□□□□□ -1.23
PTPRN-212ENST00000468454 Q6JHZ5 121 aa7.36□□□□□ -1.23
PTPRN-212ENST00000468454 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms