RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 RHPN1-AS1Q9BWJ2 59 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 V9GYV3 84 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 MTORP42345 2549 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 OTOGQ6ZRI0 2925 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 TRAV12-3A0A0B4J271 114 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 IBA57-AS1B1ANH7 110 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 F8W1H4 67 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 H3BVH4 76 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 MGPP08493 103 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 IGLC2P0DOY2 106 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 COX7CP15954 63 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 RHOHQ15669 191 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 SPINK13Q1W4C9 94 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 PYY3Q5JQD4 70 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 LINC00269Q8N2A0 174 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 LYPD1Q8N2G4 141 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 OR10AG1Q8NH19 301 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 PPDPFLQ8WWR9 84 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 DPH3P1Q9H4G8 78 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 NDUFA12Q9UI09 145 aa1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 TEP1Q99973 2627 aaKnown RBP1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 NIPBLQ6KC79 2804 aaeCLIP1.99□□□□□ -2.09
HMGB1P25-201ENST00000468402 TRBV7-1A0A0A6YYK4 115 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 C2orf70A6NJV1 201 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 FAM223BA6NKX1 122 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 HIGD1CA8MV81 97 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 IGKV4-1P06312 121 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 ASIPP42127 132 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 DEFB131AP59861 70 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 FAM223AQ8IWN6 122 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 DSCR8Q96T75 97 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 PMCHL2Q9BQD1 86 aa1.98□□□□□ -2.09
HMGB1P25-201ENST00000468402 HIVEP1P15822 2718 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 TENM1Q9UKZ4 2725 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 A0A087WWC5 75 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 H3BRM9 83 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 NDUFA4O00483 81 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 DEFB4AO15263 64 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 BAGE3Q86Y29 109 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 SBSPONQ8IVN8 264 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 C15orf53Q8NAA6 179 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 RPL39LQ96EH5 51 aaKnown RBP1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 TMEM14CQ9P0S9 112 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 NOTCH2Q04721 2471 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 CREBBPQ92793 2442 aa1.97□□□□□ -2.09
HMGB1P25-201ENST00000468402 JMJD1CQ15652 2540 aa1.96□□□□□ -2.09
HMGB1P25-201ENST00000468402 VWFP04275 2813 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 HIVEP2P31629 2446 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 SMIM27A0A1W2PRY6 76 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 D6R8Y8 96 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 P0C880 135 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 IFI27P40305 119 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 TDRG1Q3Y452 100 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 C9orf116Q5BN46 136 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 USMG5Q96IX5 58 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 TXNDC17Q9BRA2 123 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 ORMDL1Q9P0S3 153 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 ANK2Q01484 3957 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 F8P00451 2351 aa1.96□□□□□ -2.1
HMGB1P25-201ENST00000468402 MAST4O15021 2626 aa1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 RBAKDNA6NC62 111 aa1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 MT-ATP8P03928 68 aa1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 FP248Q71RG6 208 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 Q8N8P6 123 aa1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 C18orf32Q8TCD1 76 aa1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 MRPL35Q9NZE8 188 aaKnown RBP1.95□□□□□ -2.1
HMGB1P25-201ENST00000468402 NBEAL2Q6ZNJ1 2754 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 C2CD3Q4AC94 2353 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 FBN1P35555 2871 aaKnown RBP1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 DNAH3Q8TD57 4116 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 A0A096LPF7 62 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 A0A1B0GUT8 65 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 H3BUA1 57 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 K7EMI3 77 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 ATOX1O00244 68 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 Q0VG73 95 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 ZNF56Q15929 161 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 DEFB114Q30KQ6 69 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 C1orf137Q5JT78 98 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 NDUFA11Q86Y39 141 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRRAPQ9Y4A5 3859 aa1.94□□□□□ -2.1
HMGB1P25-201ENST00000468402 ATRQ13535 2644 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 NSD1Q96L73 2696 aaPredicted RBP1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRAV13-2A0A0B4J235 113 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 TRBV10-3A0A0K0K1G6 114 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 NDUFC1O43677 76 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 IGKCP01834 107 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 CCKP06307 115 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 C3orf79P0CE67 100 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 RNASE3P12724 160 aaKnown RBP1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 HTN3P15516 51 aa1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 RPL39P62891 51 aaKnown RBP1.93□□□□□ -2.1
HMGB1P25-201ENST00000468402 SEC11AP67812 179 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms